RNA–Protein interactions for RNA: ENST00000293845.7

CCDC42-201, Transcript of coiled-coil domain containing 42, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC42, Length 1,374 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-201ENST00000293845 HMOX1P09601 288 aa17.68■□□□□ 0.42
CCDC42-201ENST00000293845 U2AF1L5P0DN76 240 aaPredicted RBP17.68■□□□□ 0.42
CCDC42-201ENST00000293845 U2AF1Q01081 240 aaKnown RBP eCLIP17.68■□□□□ 0.42
CCDC42-201ENST00000293845 CCDC184Q52MB2 194 aa17.68■□□□□ 0.42
CCDC42-201ENST00000293845 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.68■□□□□ 0.42
CCDC42-201ENST00000293845 EXOC5O00471 708 aa17.67■□□□□ 0.42
CCDC42-201ENST00000293845 RSPH6AQ9H0K4 717 aa17.67■□□□□ 0.42
CCDC42-201ENST00000293845 FCHSD2O94868 740 aa17.66■□□□□ 0.42
CCDC42-201ENST00000293845 MRS2Q9HD23 443 aa17.66■□□□□ 0.42
CCDC42-201ENST00000293845 KRT27Q7Z3Y8 459 aa17.66■□□□□ 0.42
CCDC42-201ENST00000293845 ZCRB1Q8TBF4 217 aaKnown RBP17.66■□□□□ 0.42
CCDC42-201ENST00000293845 CCER2I3L3R5 266 aa17.65■□□□□ 0.42
CCDC42-201ENST00000293845 PDE3BQ13370 1112 aa17.65■□□□□ 0.42
CCDC42-201ENST00000293845 SBF2Q86WG5 1849 aa17.64■□□□□ 0.41
CCDC42-201ENST00000293845 BCL9O00512 1426 aa17.64■□□□□ 0.41
CCDC42-201ENST00000293845 PRKAR2BP31323 418 aa17.64■□□□□ 0.41
CCDC42-201ENST00000293845 WDR43Q15061 677 aaKnown RBP eCLIP17.64■□□□□ 0.41
CCDC42-201ENST00000293845 AMOTQ4VCS5 1084 aa17.64■□□□□ 0.41
CCDC42-201ENST00000293845 SPG7Q9UQ90 795 aa17.64■□□□□ 0.41
CCDC42-201ENST00000293845 VIRMAQ69YN4 1812 aaKnown RBP17.63■□□□□ 0.41
CCDC42-201ENST00000293845 PCDH11XQ9BZA7 1347 aa17.63■□□□□ 0.41
CCDC42-201ENST00000293845 PCDH11YQ9BZA8 1340 aa17.63■□□□□ 0.41
CCDC42-201ENST00000293845 PNISRQ8TF01 805 aaKnown RBP17.63■□□□□ 0.41
CCDC42-201ENST00000293845 PLEKHO1Q53GL0 409 aaPredicted RBP17.62■□□□□ 0.41
CCDC42-201ENST00000293845 ILDR2Q71H61 639 aa17.62■□□□□ 0.41
CCDC42-201ENST00000293845 MIER1Q8N108 512 aa17.62■□□□□ 0.41
CCDC42-201ENST00000293845 MARCH10Q8NA82 808 aaPredicted RBP17.62■□□□□ 0.41
CCDC42-201ENST00000293845 PLEKHF1Q96S99 279 aa17.61■□□□□ 0.41
CCDC42-201ENST00000293845 PNNQ9H307 717 aaKnown RBP17.61■□□□□ 0.41
CCDC42-201ENST00000293845 DLG5Q8TDM6 1919 aa17.61■□□□□ 0.41
CCDC42-201ENST00000293845 KAT6BQ8WYB5 2073 aa17.6■□□□□ 0.41
CCDC42-201ENST00000293845 CYP27B1O15528 508 aa17.6■□□□□ 0.41
CCDC42-201ENST00000293845 ADAMTS8Q9UP79 889 aa17.6■□□□□ 0.41
CCDC42-201ENST00000293845 DOT1LQ8TEK3 1739 aa17.59■□□□□ 0.41
CCDC42-201ENST00000293845 SCN11AQ9UI33 1791 aa17.59■□□□□ 0.41
CCDC42-201ENST00000293845 ADAMTS7Q9UKP4 1686 aa17.59■□□□□ 0.41
CCDC42-201ENST00000293845 TOGARAM1Q9Y4F4 1720 aa17.59■□□□□ 0.41
CCDC42-201ENST00000293845 PHKG2P15735 406 aa17.58■□□□□ 0.4
CCDC42-201ENST00000293845 MTHFSDQ2M296 383 aaKnown RBP17.58■□□□□ 0.4
CCDC42-201ENST00000293845 IFNL2Q8IZJ0 200 aa17.58■□□□□ 0.4
CCDC42-201ENST00000293845 DDX54Q8TDD1 881 aaKnown RBP17.58■□□□□ 0.4
CCDC42-201ENST00000293845 PHACTR3Q96KR7 559 aa17.58■□□□□ 0.4
CCDC42-201ENST00000293845 NHSQ6T4R5 1651 aa17.58■□□□□ 0.4
CCDC42-201ENST00000293845 NKX1-1Q15270 411 aaPredicted RBP17.57■□□□□ 0.4
CCDC42-201ENST00000293845 ZNF530Q6P9A1 599 aaPredicted RBP17.57■□□□□ 0.4
CCDC42-201ENST00000293845 FAM196AQ6ZSG2 479 aa17.57■□□□□ 0.4
CCDC42-201ENST00000293845 GAS2L2Q8NHY3 880 aa17.57■□□□□ 0.4
CCDC42-201ENST00000293845 ITGB4P16144 1822 aa17.57■□□□□ 0.4
CCDC42-201ENST00000293845 EP400Q96L91 3159 aa17.57■□□□□ 0.4
CCDC42-201ENST00000293845 NEFMP07197 916 aa17.56■□□□□ 0.4
CCDC42-201ENST00000293845 FAM182BQ5T319 152 aa17.56■□□□□ 0.4
CCDC42-201ENST00000293845 AKAP4Q5JQC9 854 aa17.55■□□□□ 0.4
CCDC42-201ENST00000293845 MAPK8IP3Q9UPT6 1336 aa17.55■□□□□ 0.4
CCDC42-201ENST00000293845 TNS1Q9HBL0 1735 aaKnown RBP17.55■□□□□ 0.4
CCDC42-201ENST00000293845 HSP90AB1P08238 724 aaKnown RBP17.54■□□□□ 0.4
CCDC42-201ENST00000293845 C1orf141Q5JVX7 400 aa17.54■□□□□ 0.4
CCDC42-201ENST00000293845 RUNDC1Q96C34 613 aa17.54■□□□□ 0.4
CCDC42-201ENST00000293845 KDM6AO15550 1401 aaPredicted RBP17.54■□□□□ 0.4
CCDC42-201ENST00000293845 MAP3K5Q99683 1374 aa17.53■□□□□ 0.4
CCDC42-201ENST00000293845 CCDC146Q8IYE0 955 aa17.53■□□□□ 0.4
CCDC42-201ENST00000293845 BTAF1O14981 1849 aa17.52■□□□□ 0.39
CCDC42-201ENST00000293845 DCAF5Q96JK2 942 aa17.52■□□□□ 0.39
CCDC42-201ENST00000293845 MRC1P22897 1456 aa17.51■□□□□ 0.39
CCDC42-201ENST00000293845 GNAT3A8MTJ3 354 aa17.51■□□□□ 0.39
CCDC42-201ENST00000293845 NFE2L2Q16236 605 aa17.51■□□□□ 0.39
CCDC42-201ENST00000293845 FAM9BQ8IZU0 186 aa17.51■□□□□ 0.39
CCDC42-201ENST00000293845 SIPA1L3O60292 1781 aaPredicted RBP17.5■□□□□ 0.39
CCDC42-201ENST00000293845 HTATSF1O43719 755 aaKnown RBP17.49■□□□□ 0.39
CCDC42-201ENST00000293845 TMPOP42166 694 aaKnown RBP17.49■□□□□ 0.39
CCDC42-201ENST00000293845 RGPD3A6NKT7 1758 aaPredicted RBP17.48■□□□□ 0.39
CCDC42-201ENST00000293845 RGPD4Q7Z3J3 1758 aa17.48■□□□□ 0.39
CCDC42-201ENST00000293845 CEMIPQ8WUJ3 1361 aa17.48■□□□□ 0.39
CCDC42-201ENST00000293845 ERVV-2B6SEH9 535 aa17.48■□□□□ 0.39
CCDC42-201ENST00000293845 MPRIPQ6WCQ1 1025 aa17.48■□□□□ 0.39
CCDC42-201ENST00000293845 BCL11BQ9C0K0 894 aaPredicted RBP17.48■□□□□ 0.39
CCDC42-201ENST00000293845 RNMTO43148 476 aaKnown RBP17.47■□□□□ 0.39
CCDC42-201ENST00000293845 ACSBG1Q96GR2 724 aa17.47■□□□□ 0.39
CCDC42-201ENST00000293845 APAF1O14727 1248 aa17.46■□□□□ 0.39
CCDC42-201ENST00000293845 KCNQ2O43526 872 aa17.46■□□□□ 0.39
CCDC42-201ENST00000293845 TRIM37O94972 964 aa17.46■□□□□ 0.39
CCDC42-201ENST00000293845 PRIM1P49642 420 aaKnown RBP17.46■□□□□ 0.39
CCDC42-201ENST00000293845 CCDC125Q86Z20 511 aa17.46■□□□□ 0.39
CCDC42-201ENST00000293845 RIPK4P57078 832 aa17.45■□□□□ 0.38
CCDC42-201ENST00000293845 IL17REQ8NFR9 667 aa17.45■□□□□ 0.38
CCDC42-201ENST00000293845 LGR6Q9HBX8 967 aa17.45■□□□□ 0.38
CCDC42-201ENST00000293845 PAPPAQ13219 1627 aa17.45■□□□□ 0.38
CCDC42-201ENST00000293845 LY75O60449 1722 aa17.44■□□□□ 0.38
CCDC42-201ENST00000293845 LMOD3Q0VAK6 560 aa17.44■□□□□ 0.38
CCDC42-201ENST00000293845 NCBP3Q53F19 620 aaKnown RBP17.44■□□□□ 0.38
CCDC42-201ENST00000293845 PTF1AQ7RTS3 328 aa17.44■□□□□ 0.38
CCDC42-201ENST00000293845 RTF1Q92541 710 aaKnown RBP17.44■□□□□ 0.38
CCDC42-201ENST00000293845 UPF1Q92900 1129 aaKnown RBP eCLIP17.44■□□□□ 0.38
CCDC42-201ENST00000293845 SYTL4Q96C24 671 aaPredicted RBP17.43■□□□□ 0.38
CCDC42-201ENST00000293845 RRP7AQ9Y3A4 280 aaKnown RBP17.43■□□□□ 0.38
CCDC42-201ENST00000293845 CABP4P57796 275 aa17.42■□□□□ 0.38
CCDC42-201ENST00000293845 SLC52A2Q9HAB3 445 aa17.42■□□□□ 0.38
CCDC42-201ENST00000293845 TMOD3Q9NYL9 352 aa17.42■□□□□ 0.38
CCDC42-201ENST00000293845 MCM10Q7L590 875 aa17.41■□□□□ 0.38
CCDC42-201ENST00000293845 PIGBQ92521 554 aa17.41■□□□□ 0.38
CCDC42-201ENST00000293845 TRIM35Q9UPQ4 493 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms