RNA–Protein interactions for RNA: ENST00000288447.8

DMD-201, Transcript of dystrophin, humanhuman

TSL 1 (best) BASIC

Gene DMD, Length 3,856 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-201ENST00000288447 C1orf131Q8NDD1 294 aaKnown RBP4.11□□□□□ -1.75
DMD-201ENST00000288447 ATXN2LQ8WWM7 1075 aaKnown RBP4.11□□□□□ -1.75
DMD-201ENST00000288447 CEP89Q96ST8 783 aa4.11□□□□□ -1.75
DMD-201ENST00000288447 PCDH12Q9NPG4 1184 aa4.11□□□□□ -1.75
DMD-201ENST00000288447 ERBB3P21860 1342 aa4.11□□□□□ -1.75
DMD-201ENST00000288447 KLHL33A6NCF5 533 aa4.11□□□□□ -1.75
DMD-201ENST00000288447 STK10O94804 968 aaKnown RBP4.11□□□□□ -1.75
DMD-201ENST00000288447 CD53P19397 219 aa4.11□□□□□ -1.75
DMD-201ENST00000288447 TSPAN7P41732 249 aa4.11□□□□□ -1.75
DMD-201ENST00000288447 LMNB2Q03252 620 aa4.11□□□□□ -1.75
DMD-201ENST00000288447 IFT88Q13099 833 aa4.11□□□□□ -1.75
DMD-201ENST00000288447 TCEAL1Q15170 157 aa4.11□□□□□ -1.75
DMD-201ENST00000288447 PLBD1Q6P4A8 553 aa4.11□□□□□ -1.75
DMD-201ENST00000288447 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.11□□□□□ -1.75
DMD-201ENST00000288447 REM2Q8IYK8 340 aaPredicted RBP4.11□□□□□ -1.75
DMD-201ENST00000288447 STK11IPQ8N1F8 1099 aa4.11□□□□□ -1.75
DMD-201ENST00000288447 TRPV5Q9NQA5 729 aa4.11□□□□□ -1.75
DMD-201ENST00000288447 PEX14O75381 377 aa4.11□□□□□ -1.75
DMD-201ENST00000288447 TUSC1Q2TAM9 212 aa4.11□□□□□ -1.75
DMD-201ENST00000288447 ZSCAN30Q86W11 494 aa4.11□□□□□ -1.75
DMD-201ENST00000288447 ZNF594Q96JF6 807 aaPredicted RBP4.11□□□□□ -1.75
DMD-201ENST00000288447 NBPF3Q9H094 633 aa4.11□□□□□ -1.75
DMD-201ENST00000288447 DDX56Q9NY93 547 aaKnown RBP4.11□□□□□ -1.75
DMD-201ENST00000288447 KIF4AO95239 1232 aa4.1□□□□□ -1.75
DMD-201ENST00000288447 OGFOD1Q8N543 542 aa4.1□□□□□ -1.75
DMD-201ENST00000288447 RSPH1Q8WYR4 309 aa4.1□□□□□ -1.75
DMD-201ENST00000288447 RPS6KC1Q96S38 1066 aa4.1□□□□□ -1.75
DMD-201ENST00000288447 PIK3R4Q99570 1358 aa4.1□□□□□ -1.75
DMD-201ENST00000288447 PRC1O43663 620 aa4.1□□□□□ -1.75
DMD-201ENST00000288447 CCDC159P0C7I6 412 aa4.1□□□□□ -1.75
DMD-201ENST00000288447 PLEKHG4Q58EX7 1191 aa4.1□□□□□ -1.75
DMD-201ENST00000288447 AKT1S1Q96B36 256 aa4.1□□□□□ -1.75
DMD-201ENST00000288447 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.1□□□□□ -1.75
DMD-201ENST00000288447 LZTS3O60299 673 aaPredicted RBP4.1□□□□□ -1.75
DMD-201ENST00000288447 MORC3Q14149 939 aa4.1□□□□□ -1.75
DMD-201ENST00000288447 LMNTD2Q8IXW0 634 aa4.1□□□□□ -1.75
DMD-201ENST00000288447 TEX9Q8N6V9 391 aa4.1□□□□□ -1.75
DMD-201ENST00000288447 CSB-PGBD3P0DP91 1061 aa4.09□□□□□ -1.75
DMD-201ENST00000288447 CCDC184Q52MB2 194 aa4.09□□□□□ -1.75
DMD-201ENST00000288447 CC2D1BQ5T0F9 858 aaKnown RBP4.09□□□□□ -1.75
DMD-201ENST00000288447 CCDC146Q8IYE0 955 aa4.09□□□□□ -1.75
DMD-201ENST00000288447 TMC2Q8TDI7 906 aa4.09□□□□□ -1.75
DMD-201ENST00000288447 TSPY26PQ9H489 355 aa4.09□□□□□ -1.75
DMD-201ENST00000288447 NOL7Q9UMY1 257 aaKnown RBP4.09□□□□□ -1.75
DMD-201ENST00000288447 GOLGA6L3A6NEY3 463 aa4.09□□□□□ -1.75
DMD-201ENST00000288447 KIF3BO15066 747 aa4.09□□□□□ -1.75
DMD-201ENST00000288447 CASP2P42575 452 aa4.09□□□□□ -1.75
DMD-201ENST00000288447 DHX8Q14562 1220 aaKnown RBP4.09□□□□□ -1.75
DMD-201ENST00000288447 RASEFQ8IZ41 740 aa4.09□□□□□ -1.75
DMD-201ENST00000288447 HOXA2O43364 376 aa4.09□□□□□ -1.76
DMD-201ENST00000288447 KIF1CO43896 1103 aaKnown RBP4.09□□□□□ -1.76
DMD-201ENST00000288447 PAK3O75914 559 aaPredicted RBP4.09□□□□□ -1.76
DMD-201ENST00000288447 SSR1P43307 286 aaKnown RBP4.09□□□□□ -1.76
DMD-201ENST00000288447 INHBEP58166 350 aa4.09□□□□□ -1.76
DMD-201ENST00000288447 KCTD2Q14681 263 aa4.09□□□□□ -1.76
DMD-201ENST00000288447 DBX2Q6ZNG2 339 aa4.09□□□□□ -1.76
DMD-201ENST00000288447 TAS1R3Q7RTX0 852 aa4.09□□□□□ -1.76
DMD-201ENST00000288447 METTL16Q86W50 562 aaKnown RBP4.09□□□□□ -1.76
DMD-201ENST00000288447 PPM1EQ8WY54 764 aa4.09□□□□□ -1.76
DMD-201ENST00000288447 KLRG2A4D1S0 409 aaPredicted RBP4.08□□□□□ -1.76
DMD-201ENST00000288447 TMEM110-MUSTN1A8MSY1 372 aa4.08□□□□□ -1.76
DMD-201ENST00000288447 C9IYK1 514 aa4.08□□□□□ -1.76
DMD-201ENST00000288447 SMAPO00193 183 aa4.08□□□□□ -1.76
DMD-201ENST00000288447 KIF20AO95235 890 aa4.08□□□□□ -1.76
DMD-201ENST00000288447 PDGFRBP09619 1106 aa4.08□□□□□ -1.76
DMD-201ENST00000288447 ARMCX6Q7L4S7 300 aa4.08□□□□□ -1.76
DMD-201ENST00000288447 BRSK2Q8IWQ3 736 aa4.08□□□□□ -1.76
DMD-201ENST00000288447 PDILTQ8N807 584 aa4.08□□□□□ -1.76
DMD-201ENST00000288447 ATL2Q8NHH9 583 aa4.08□□□□□ -1.76
DMD-201ENST00000288447 SMARCC1Q92922 1105 aaPredicted RBP4.08□□□□□ -1.76
DMD-201ENST00000288447 RNPC3Q96LT9 517 aaKnown RBP4.08□□□□□ -1.76
DMD-201ENST00000288447 FAM13BQ9NYF5 915 aa4.08□□□□□ -1.76
DMD-201ENST00000288447 DHX29Q7Z478 1369 aaKnown RBP4.08□□□□□ -1.76
DMD-201ENST00000288447 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.08□□□□□ -1.76
DMD-201ENST00000288447 IQCA1LA6NCM1 817 aa4.08□□□□□ -1.76
DMD-201ENST00000288447 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.08□□□□□ -1.76
DMD-201ENST00000288447 CCDC144BQ3MJ40 725 aa4.08□□□□□ -1.76
DMD-201ENST00000288447 USP51Q70EK9 711 aa4.08□□□□□ -1.76
DMD-201ENST00000288447 PARP9Q8IXQ6 854 aa4.08□□□□□ -1.76
DMD-201ENST00000288447 PURBQ96QR8 312 aaKnown RBP4.08□□□□□ -1.76
DMD-201ENST00000288447 CDC5LQ99459 802 aaKnown RBP4.08□□□□□ -1.76
DMD-201ENST00000288447 TEX13AQ9BXU3 409 aaPredicted RBP4.08□□□□□ -1.76
DMD-201ENST00000288447 METTL5Q9NRN9 209 aaKnown RBP4.08□□□□□ -1.76
DMD-201ENST00000288447 MKRN1Q9UHC7 482 aaKnown RBP4.08□□□□□ -1.76
DMD-201ENST00000288447 TBC1D2BQ9UPU7 963 aa4.08□□□□□ -1.76
DMD-201ENST00000288447 COL4A3BPQ9Y5P4 624 aa4.08□□□□□ -1.76
DMD-201ENST00000288447 SLC30A1Q9Y6M5 507 aa4.08□□□□□ -1.76
DMD-201ENST00000288447 CTCFP49711 727 aaPredicted RBP4.08□□□□□ -1.76
DMD-201ENST00000288447 GPIHBP1Q8IV16 184 aa4.08□□□□□ -1.76
DMD-201ENST00000288447 TGIF2Q9GZN2 237 aa4.08□□□□□ -1.76
DMD-201ENST00000288447 PDCL3Q9H2J4 239 aa4.08□□□□□ -1.76
DMD-201ENST00000288447 IPO8O15397 1037 aaKnown RBP4.07□□□□□ -1.76
DMD-201ENST00000288447 XRCC5P13010 732 aaKnown RBP4.07□□□□□ -1.76
DMD-201ENST00000288447 IBSPP21815 317 aaPredicted RBP4.07□□□□□ -1.76
DMD-201ENST00000288447 CAP2P40123 477 aa4.07□□□□□ -1.76
DMD-201ENST00000288447 ZNF132P52740 706 aa4.07□□□□□ -1.76
DMD-201ENST00000288447 BIRC2Q13490 618 aa4.07□□□□□ -1.76
DMD-201ENST00000288447 SIM2Q14190 667 aaPredicted RBP4.07□□□□□ -1.76
DMD-201ENST00000288447 DACT2Q5SW24 774 aa4.07□□□□□ -1.76
DMD-201ENST00000288447 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms