RNA–Protein interactions for RNA: ENST00000284041.7

SREK1-201, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 3,751 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-201ENST00000284041 SCUBE3Q8IX30 993 aa5.65□□□□□ -1.51
SREK1-201ENST00000284041 DNAAF2Q9NVR5 837 aaKnown RBP5.65□□□□□ -1.51
SREK1-201ENST00000284041 SCNN1DP51172 638 aa5.64□□□□□ -1.51
SREK1-201ENST00000284041 RGL4Q8IZJ4 473 aa5.64□□□□□ -1.51
SREK1-201ENST00000284041 PARP2Q9UGN5 583 aa5.64□□□□□ -1.51
SREK1-201ENST00000284041 DMGDHQ9UI17 866 aaKnown RBP5.64□□□□□ -1.51
SREK1-201ENST00000284041 MYT1LQ9UL68 1186 aa5.64□□□□□ -1.51
SREK1-201ENST00000284041 A0A1W2PRU2 124 aa5.64□□□□□ -1.51
SREK1-201ENST00000284041 FGD1P98174 961 aa5.64□□□□□ -1.51
SREK1-201ENST00000284041 DCTN4Q9UJW0 460 aa5.64□□□□□ -1.51
SREK1-201ENST00000284041 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.64□□□□□ -1.51
SREK1-201ENST00000284041 EGFLAMQ63HQ2 1017 aa5.64□□□□□ -1.51
SREK1-201ENST00000284041 PRM3Q9NNZ6 103 aa5.64□□□□□ -1.51
SREK1-201ENST00000284041 RNF40O75150 1001 aa5.63□□□□□ -1.51
SREK1-201ENST00000284041 RAB11FIP3O75154 756 aa5.63□□□□□ -1.51
SREK1-201ENST00000284041 GTF2IP78347 998 aa5.63□□□□□ -1.51
SREK1-201ENST00000284041 UBXN4Q92575 508 aa5.63□□□□□ -1.51
SREK1-201ENST00000284041 NKX2-3Q8TAU0 364 aa5.63□□□□□ -1.51
SREK1-201ENST00000284041 ESPNB1AK53 854 aa5.63□□□□□ -1.51
SREK1-201ENST00000284041 NPR3P17342 541 aa5.63□□□□□ -1.51
SREK1-201ENST00000284041 TMED8Q6PL24 325 aaPredicted RBP5.63□□□□□ -1.51
SREK1-201ENST00000284041 GLYCTKQ8IVS8 523 aa5.63□□□□□ -1.51
SREK1-201ENST00000284041 SLC39A7Q92504 469 aa5.63□□□□□ -1.51
SREK1-201ENST00000284041 PKNOX2Q96KN3 472 aa5.63□□□□□ -1.51
SREK1-201ENST00000284041 DUSP9Q99956 384 aaKnown RBP5.63□□□□□ -1.51
SREK1-201ENST00000284041 HIRIP3Q9BW71 556 aaPredicted RBP5.63□□□□□ -1.51
SREK1-201ENST00000284041 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.63□□□□□ -1.51
SREK1-201ENST00000284041 ATP5J2-PTCD1G3V325 749 aa5.62□□□□□ -1.51
SREK1-201ENST00000284041 OXLD1Q5BKU9 147 aa5.62□□□□□ -1.51
SREK1-201ENST00000284041 PACS2Q86VP3 889 aa5.62□□□□□ -1.51
SREK1-201ENST00000284041 STAG1Q8WVM7 1258 aa5.62□□□□□ -1.51
SREK1-201ENST00000284041 SPACA7Q96KW9 195 aa5.62□□□□□ -1.51
SREK1-201ENST00000284041 USB1Q9BQ65 265 aaKnown RBP5.62□□□□□ -1.51
SREK1-201ENST00000284041 A6NHS1 94 aa5.62□□□□□ -1.51
SREK1-201ENST00000284041 RPUSD2Q8IZ73 545 aaKnown RBP5.62□□□□□ -1.51
SREK1-201ENST00000284041 FOXJ1Q92949 421 aa5.62□□□□□ -1.51
SREK1-201ENST00000284041 EGFL7Q9UHF1 273 aa5.62□□□□□ -1.51
SREK1-201ENST00000284041 PPP4R3BQ5MIZ7 849 aa5.61□□□□□ -1.51
SREK1-201ENST00000284041 KLHL42Q9P2K6 505 aa5.61□□□□□ -1.51
SREK1-201ENST00000284041 VPS9D1Q9Y2B5 631 aa5.61□□□□□ -1.51
SREK1-201ENST00000284041 PCDHB9Q9Y5E1 797 aa5.61□□□□□ -1.51
SREK1-201ENST00000284041 HMGB1P09429 215 aaKnown RBP5.61□□□□□ -1.51
SREK1-201ENST00000284041 MCF2L2Q86YR7 1114 aa5.61□□□□□ -1.51
SREK1-201ENST00000284041 CARD14Q9BXL6 1004 aa5.61□□□□□ -1.51
SREK1-201ENST00000284041 RABGEF1Q9UJ41 708 aa5.61□□□□□ -1.51
SREK1-201ENST00000284041 NEFLP07196 543 aa5.61□□□□□ -1.51
SREK1-201ENST00000284041 TSPAN10Q9H1Z9 355 aaPredicted RBP5.61□□□□□ -1.51
SREK1-201ENST00000284041 QTRT2Q9H974 415 aaKnown RBP5.6□□□□□ -1.51
SREK1-201ENST00000284041 EVA1BQ9NVM1 165 aa5.6□□□□□ -1.51
SREK1-201ENST00000284041 ZFRQ96KR1 1074 aaKnown RBP5.6□□□□□ -1.51
SREK1-201ENST00000284041 SRA1Q9HD15 236 aaKnown RBP5.6□□□□□ -1.51
SREK1-201ENST00000284041 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.6□□□□□ -1.51
SREK1-201ENST00000284041 BCCIPQ9P287 314 aaKnown RBP eCLIP5.6□□□□□ -1.51
SREK1-201ENST00000284041 PRKAG2Q9UGJ0 569 aa5.6□□□□□ -1.51
SREK1-201ENST00000284041 MRPL42Q9Y6G3 142 aaKnown RBP5.6□□□□□ -1.51
SREK1-201ENST00000284041 FMNL1O95466 1100 aaPredicted RBP5.6□□□□□ -1.51
SREK1-201ENST00000284041 IRS1P35568 1242 aa5.6□□□□□ -1.51
SREK1-201ENST00000284041 EHHADHQ08426 723 aa5.6□□□□□ -1.51
SREK1-201ENST00000284041 COX20Q5RI15 118 aa5.6□□□□□ -1.51
SREK1-201ENST00000284041 TNS4Q8IZW8 715 aa5.6□□□□□ -1.51
SREK1-201ENST00000284041 ZNF295-AS1Q8N0V1 137 aa5.6□□□□□ -1.51
SREK1-201ENST00000284041 FAM126AQ9BYI3 521 aaPredicted RBP5.6□□□□□ -1.51
SREK1-201ENST00000284041 F6X3S4 739 aa5.59□□□□□ -1.51
SREK1-201ENST00000284041 ERCC3P19447 782 aa5.59□□□□□ -1.51
SREK1-201ENST00000284041 ORC1Q13415 861 aa5.59□□□□□ -1.51
SREK1-201ENST00000284041 ERICH6BQ5W0A0 696 aa5.59□□□□□ -1.51
SREK1-201ENST00000284041 LARP1Q6PKG0 1096 aaKnown RBP5.59□□□□□ -1.51
SREK1-201ENST00000284041 PPP1R18Q6NYC8 613 aa5.59□□□□□ -1.52
SREK1-201ENST00000284041 BCAMP50895 628 aa5.58□□□□□ -1.52
SREK1-201ENST00000284041 FKBP4Q02790 459 aaKnown RBP eCLIP5.58□□□□□ -1.52
SREK1-201ENST00000284041 ERFEQ4G0M1 354 aa5.58□□□□□ -1.52
SREK1-201ENST00000284041 ETFBKMTQ8IXQ9 262 aa5.58□□□□□ -1.52
SREK1-201ENST00000284041 HELQQ8TDG4 1101 aa5.58□□□□□ -1.52
SREK1-201ENST00000284041 ZNF358Q9NW07 568 aa5.58□□□□□ -1.52
SREK1-201ENST00000284041 ACTN4O43707 911 aaKnown RBP5.58□□□□□ -1.52
SREK1-201ENST00000284041 PTPRNQ16849 979 aa5.58□□□□□ -1.52
SREK1-201ENST00000284041 FAM98CQ17RN3 349 aaKnown RBP5.58□□□□□ -1.52
SREK1-201ENST00000284041 FAM129BQ96TA1 746 aa5.58□□□□□ -1.52
SREK1-201ENST00000284041 SEC13P55735 322 aa5.58□□□□□ -1.52
SREK1-201ENST00000284041 DAB2P98082 770 aa5.58□□□□□ -1.52
SREK1-201ENST00000284041 COPRSQ9NQ92 184 aa5.58□□□□□ -1.52
SREK1-201ENST00000284041 DXOO77932 396 aaKnown RBP5.57□□□□□ -1.52
SREK1-201ENST00000284041 MEI1Q5TIA1 1274 aa5.57□□□□□ -1.52
SREK1-201ENST00000284041 UNC93B1Q9H1C4 597 aa5.57□□□□□ -1.52
SREK1-201ENST00000284041 ANKRD62A6NC57 917 aa5.57□□□□□ -1.52
SREK1-201ENST00000284041 EIF1AXP47813 144 aaKnown RBP5.57□□□□□ -1.52
SREK1-201ENST00000284041 PSME1Q06323 249 aa5.57□□□□□ -1.52
SREK1-201ENST00000284041 EML3Q32P44 896 aa5.57□□□□□ -1.52
SREK1-201ENST00000284041 EAPPQ56P03 285 aaPredicted RBP5.57□□□□□ -1.52
SREK1-201ENST00000284041 CERS3Q8IU89 383 aa5.57□□□□□ -1.52
SREK1-201ENST00000284041 PARNO95453 639 aaKnown RBP5.57□□□□□ -1.52
SREK1-201ENST00000284041 FGRP09769 529 aa5.57□□□□□ -1.52
SREK1-201ENST00000284041 TMEM87AQ8NBN3 555 aa5.57□□□□□ -1.52
SREK1-201ENST00000284041 RBCK1Q9BYM8 510 aa5.57□□□□□ -1.52
SREK1-201ENST00000284041 TANGO6Q9C0B7 1094 aa5.57□□□□□ -1.52
SREK1-201ENST00000284041 SCAMP3O14828 347 aaKnown RBP5.56□□□□□ -1.52
SREK1-201ENST00000284041 RAVER1Q8IY67 606 aaKnown RBP5.56□□□□□ -1.52
SREK1-201ENST00000284041 GMLQ99445 158 aa5.56□□□□□ -1.52
SREK1-201ENST00000284041 ANP32EQ9BTT0 268 aa5.56□□□□□ -1.52
SREK1-201ENST00000284041 DOLKQ9UPQ8 538 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms