RNA–Protein interactions for RNA: ENST00000272902.9

SUMF1-201, Transcript of sulfatase modifying factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMF1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMF1-201ENST00000272902 ELL2O00472 640 aaPredicted RBP28.3■■■□□ 2.12
SUMF1-201ENST00000272902 VAMP4O75379 141 aa28.29■■■□□ 2.12
SUMF1-201ENST00000272902 RTF1Q92541 710 aaKnown RBP28.29■■■□□ 2.12
SUMF1-201ENST00000272902 ZKSCAN2Q63HK3 967 aa28.28■■■□□ 2.12
SUMF1-201ENST00000272902 ANKRD24Q8TF21 1146 aa28.28■■■□□ 2.12
SUMF1-201ENST00000272902 C8orf58Q8NAV2 365 aa28.28■■■□□ 2.12
SUMF1-201ENST00000272902 CHL1O00533 1208 aa28.27■■■□□ 2.12
SUMF1-201ENST00000272902 ALDH1L2Q3SY69 923 aa28.27■■■□□ 2.12
SUMF1-201ENST00000272902 TWISTNBQ3B726 338 aaPredicted RBP28.26■■■□□ 2.11
SUMF1-201ENST00000272902 NOB1Q9ULX3 412 aaKnown RBP28.26■■■□□ 2.11
SUMF1-201ENST00000272902 LRRC37A3O60309 1634 aa28.25■■■□□ 2.11
SUMF1-201ENST00000272902 ZNF428Q96B54 188 aa28.25■■■□□ 2.11
SUMF1-201ENST00000272902 COL18A1P39060 1754 aa28.25■■■□□ 2.11
SUMF1-201ENST00000272902 CAMTA1Q9Y6Y1 1673 aa28.25■■■□□ 2.11
SUMF1-201ENST00000272902 GNAT3A8MTJ3 354 aa28.24■■■□□ 2.11
SUMF1-201ENST00000272902 TRIM27P14373 513 aa28.24■■■□□ 2.11
SUMF1-201ENST00000272902 MAP3K5Q99683 1374 aa28.23■■■□□ 2.11
SUMF1-201ENST00000272902 MIS18AQ9NYP9 233 aa28.23■■■□□ 2.11
SUMF1-201ENST00000272902 NCAPD2Q15021 1401 aa28.22■■■□□ 2.11
SUMF1-201ENST00000272902 KRT24Q2M2I5 525 aa28.22■■■□□ 2.11
SUMF1-201ENST00000272902 ERBB3P21860 1342 aa28.22■■■□□ 2.11
SUMF1-201ENST00000272902 HTATSF1O43719 755 aaKnown RBP28.21■■■□□ 2.11
SUMF1-201ENST00000272902 DZIP1LQ8IYY4 767 aaKnown RBP28.21■■■□□ 2.11
SUMF1-201ENST00000272902 SOS2Q07890 1332 aaPredicted RBP28.21■■■□□ 2.11
SUMF1-201ENST00000272902 KIF16BQ96L93 1317 aa28.21■■■□□ 2.11
SUMF1-201ENST00000272902 ATF7IPQ6VMQ6 1270 aa28.21■■■□□ 2.11
SUMF1-201ENST00000272902 KDM2BQ8NHM5 1336 aa28.2■■■□□ 2.11
SUMF1-201ENST00000272902 FTSJ3Q8IY81 847 aaKnown RBP28.2■■■□□ 2.11
SUMF1-201ENST00000272902 TCERG1O14776 1098 aaKnown RBP28.2■■■□□ 2.1
SUMF1-201ENST00000272902 IL17REQ8NFR9 667 aa28.18■■■□□ 2.1
SUMF1-201ENST00000272902 BRPF1P55201 1214 aaPredicted RBP28.18■■■□□ 2.1
SUMF1-201ENST00000272902 MRPL50Q8N5N7 158 aaKnown RBP28.18■■■□□ 2.1
SUMF1-201ENST00000272902 LMO7Q8WWI1 1683 aa28.17■■■□□ 2.1
SUMF1-201ENST00000272902 CHRNA2Q15822 529 aa28.17■■■□□ 2.1
SUMF1-201ENST00000272902 NHSL1Q5SYE7 1610 aa28.17■■■□□ 2.1
SUMF1-201ENST00000272902 MVPQ14764 893 aaKnown RBP28.17■■■□□ 2.1
SUMF1-201ENST00000272902 TSPYL4Q9UJ04 414 aa28.16■■■□□ 2.1
SUMF1-201ENST00000272902 KIAA0232Q92628 1395 aa28.16■■■□□ 2.1
SUMF1-201ENST00000272902 MS4A1P11836 297 aa28.16■■■□□ 2.1
SUMF1-201ENST00000272902 IPO8O15397 1037 aaKnown RBP28.15■■■□□ 2.1
SUMF1-201ENST00000272902 VIRMAQ69YN4 1812 aaKnown RBP28.15■■■□□ 2.1
SUMF1-201ENST00000272902 CENPQQ7L2Z9 268 aaPredicted RBP28.14■■■□□ 2.09
SUMF1-201ENST00000272902 ABCA3Q99758 1704 aa28.12■■■□□ 2.09
SUMF1-201ENST00000272902 CPDO75976 1380 aa28.12■■■□□ 2.09
SUMF1-201ENST00000272902 FAM208AQ9UK61 1670 aaKnown RBP28.12■■■□□ 2.09
SUMF1-201ENST00000272902 SKAP1Q86WV1 359 aa28.11■■■□□ 2.09
SUMF1-201ENST00000272902 PLEKHO1Q53GL0 409 aaPredicted RBP28.11■■■□□ 2.09
SUMF1-201ENST00000272902 TMEM57Q8N5G2 664 aa28.11■■■□□ 2.09
SUMF1-201ENST00000272902 ABCC6O95255 1503 aa28.11■■■□□ 2.09
SUMF1-201ENST00000272902 ZNF530Q6P9A1 599 aaPredicted RBP28.1■■■□□ 2.09
SUMF1-201ENST00000272902 NLRP2Q9NX02 1062 aa28.1■■■□□ 2.09
SUMF1-201ENST00000272902 IGHDP01880 384 aa28.1■■■□□ 2.09
SUMF1-201ENST00000272902 ITPRIPQ8IWB1 547 aa28.1■■■□□ 2.09
SUMF1-201ENST00000272902 CEMIPQ8WUJ3 1361 aa28.09■■■□□ 2.09
SUMF1-201ENST00000272902 LGR6Q9HBX8 967 aa28.09■■■□□ 2.09
SUMF1-201ENST00000272902 AAMPQ13685 434 aa28.09■■■□□ 2.09
SUMF1-201ENST00000272902 AMOTQ4VCS5 1084 aa28.09■■■□□ 2.09
SUMF1-201ENST00000272902 PCDHB15Q9Y5E8 787 aa28.08■■■□□ 2.09
SUMF1-201ENST00000272902 AKAP4Q5JQC9 854 aa28.07■■■□□ 2.08
SUMF1-201ENST00000272902 TAF7Q15545 349 aaPredicted RBP28.07■■■□□ 2.08
SUMF1-201ENST00000272902 ARHGAP45Q92619 1136 aa28.07■■■□□ 2.08
SUMF1-201ENST00000272902 CSB-PGBD3P0DP91 1061 aa28.06■■■□□ 2.08
SUMF1-201ENST00000272902 LTBP4Q8N2S1 1624 aa28.06■■■□□ 2.08
SUMF1-201ENST00000272902 DDX19BQ9UMR2 479 aa28.06■■■□□ 2.08
SUMF1-201ENST00000272902 RBM19Q9Y4C8 960 aaKnown RBP28.06■■■□□ 2.08
SUMF1-201ENST00000272902 HAP1P54257 671 aaPredicted RBP28.05■■■□□ 2.08
SUMF1-201ENST00000272902 MPRIPQ6WCQ1 1025 aa28.04■■■□□ 2.08
SUMF1-201ENST00000272902 ROBO1Q9Y6N7 1651 aa28.04■■■□□ 2.08
SUMF1-201ENST00000272902 PRDM11Q9NQV5 511 aa28.03■■■□□ 2.08
SUMF1-201ENST00000272902 C1orf141Q5JVX7 400 aa28.03■■■□□ 2.08
SUMF1-201ENST00000272902 RAPGEF4Q8WZA2 1011 aa28.01■■■□□ 2.08
SUMF1-201ENST00000272902 MEGF6O75095 1541 aa28.01■■■□□ 2.08
SUMF1-201ENST00000272902 KDM3BQ7LBC6 1761 aa28.01■■■□□ 2.07
SUMF1-201ENST00000272902 BABAM1Q9NWV8 329 aa28.01■■■□□ 2.07
SUMF1-201ENST00000272902 ABCC4O15439 1325 aa28■■■□□ 2.07
SUMF1-201ENST00000272902 RNMTO43148 476 aaKnown RBP27.98■■■□□ 2.07
SUMF1-201ENST00000272902 TATP17735 454 aaPredicted RBP27.97■■■□□ 2.07
SUMF1-201ENST00000272902 API5Q9BZZ5 524 aaKnown RBP27.97■■■□□ 2.07
SUMF1-201ENST00000272902 ZBTB40Q9NUA8 1239 aa27.97■■■□□ 2.07
SUMF1-201ENST00000272902 SLC4A2P04920 1241 aa27.96■■■□□ 2.07
SUMF1-201ENST00000272902 TEFQ10587 303 aa27.96■■■□□ 2.07
SUMF1-201ENST00000272902 ADAMTS7Q9UKP4 1686 aa27.96■■■□□ 2.07
SUMF1-201ENST00000272902 SIPA1L3O60292 1781 aaPredicted RBP27.96■■■□□ 2.07
SUMF1-201ENST00000272902 RGS12O14924 1447 aa27.95■■■□□ 2.06
SUMF1-201ENST00000272902 ANP32EQ9BTT0 268 aa27.95■■■□□ 2.06
SUMF1-201ENST00000272902 COL5A2P05997 1499 aaPredicted RBP27.95■■■□□ 2.06
SUMF1-201ENST00000272902 OVOS2A0A0G2JMS6 1433 aa27.93■■■□□ 2.06
SUMF1-201ENST00000272902 SCN11AQ9UI33 1791 aa27.93■■■□□ 2.06
SUMF1-201ENST00000272902 PKD1L3Q7Z443 1732 aa27.93■■■□□ 2.06
SUMF1-201ENST00000272902 WDR17Q8IZU2 1322 aa27.93■■■□□ 2.06
SUMF1-201ENST00000272902 BTBD11A6QL63 1104 aa27.92■■■□□ 2.06
SUMF1-201ENST00000272902 ZBTB7BO15156 539 aaPredicted RBP27.92■■■□□ 2.06
SUMF1-201ENST00000272902 KCNQ3O43525 872 aa27.92■■■□□ 2.06
SUMF1-201ENST00000272902 NECTIN2Q92692 538 aa27.92■■■□□ 2.06
SUMF1-201ENST00000272902 CACNA1FO60840 1977 aa27.92■■■□□ 2.06
SUMF1-201ENST00000272902 G2E3Q7L622 706 aa27.92■■■□□ 2.06
SUMF1-201ENST00000272902 AHDC1Q5TGY3 1603 aaPredicted RBP27.91■■■□□ 2.06
SUMF1-201ENST00000272902 RWDD1Q9H446 243 aaPredicted RBP27.91■■■□□ 2.06
SUMF1-201ENST00000272902 SPG7Q9UQ90 795 aa27.91■■■□□ 2.06
SUMF1-201ENST00000272902 EIF4A1P60842 406 aaKnown RBP27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms