RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 RFC1P35251 1148 aaPredicted RBP18.4■□□□□ 0.54
UBR3-201ENST00000272793 FKBP5Q13451 457 aaPredicted RBP18.4■□□□□ 0.54
UBR3-201ENST00000272793 SMC1BQ8NDV3 1235 aa18.4■□□□□ 0.54
UBR3-201ENST00000272793 MPHOSPH9Q99550 1183 aa18.4■□□□□ 0.54
UBR3-201ENST00000272793 CPSF2Q9P2I0 782 aaKnown RBP18.4■□□□□ 0.54
UBR3-201ENST00000272793 ZHX1Q9UKY1 873 aaPredicted RBP18.4■□□□□ 0.54
UBR3-201ENST00000272793 AIMP1Q12904 312 aaKnown RBP18.4■□□□□ 0.54
UBR3-201ENST00000272793 CCDC96Q2M329 555 aa18.4■□□□□ 0.54
UBR3-201ENST00000272793 STK3Q13188 491 aa18.4■□□□□ 0.54
UBR3-201ENST00000272793 CEP57L1Q8IYX8 460 aa18.4■□□□□ 0.54
UBR3-201ENST00000272793 APAF1O14727 1248 aa18.39■□□□□ 0.54
UBR3-201ENST00000272793 MYBBP1AQ9BQG0 1328 aaKnown RBP18.39■□□□□ 0.54
UBR3-201ENST00000272793 TRAK1Q9UPV9 953 aa18.39■□□□□ 0.54
UBR3-201ENST00000272793 PHLDB1Q86UU1 1377 aa18.39■□□□□ 0.53
UBR3-201ENST00000272793 KIF15Q9NS87 1388 aa18.39■□□□□ 0.53
UBR3-201ENST00000272793 NUP133Q8WUM0 1156 aa18.39■□□□□ 0.53
UBR3-201ENST00000272793 TMX1Q9H3N1 280 aa18.39■□□□□ 0.53
UBR3-201ENST00000272793 SEPT14Q6ZU15 432 aa18.39■□□□□ 0.53
UBR3-201ENST00000272793 ZNF354CQ86Y25 554 aa18.39■□□□□ 0.53
UBR3-201ENST00000272793 KIF5CO60282 957 aa18.39■□□□□ 0.53
UBR3-201ENST00000272793 ERCC5P28715 1186 aaPredicted RBP18.39■□□□□ 0.53
UBR3-201ENST00000272793 CCDC69A6NI79 296 aa18.38■□□□□ 0.53
UBR3-201ENST00000272793 RBM28Q9NW13 759 aaKnown RBP18.38■□□□□ 0.53
UBR3-201ENST00000272793 BANK1Q8NDB2 785 aa18.38■□□□□ 0.53
UBR3-201ENST00000272793 CCDC158Q5M9N0 1113 aa18.37■□□□□ 0.53
UBR3-201ENST00000272793 MBD3O95983 291 aa18.37■□□□□ 0.53
UBR3-201ENST00000272793 EID1Q9Y6B2 187 aa18.37■□□□□ 0.53
UBR3-201ENST00000272793 PANK1Q8TE04 598 aa18.37■□□□□ 0.53
UBR3-201ENST00000272793 FAM177BA6PVY3 158 aa18.37■□□□□ 0.53
UBR3-201ENST00000272793 ZFYP08048 801 aaPredicted RBP18.37■□□□□ 0.53
UBR3-201ENST00000272793 NEK4P51957 841 aa18.37■□□□□ 0.53
UBR3-201ENST00000272793 CACNA2D4Q7Z3S7 1137 aa18.37■□□□□ 0.53
UBR3-201ENST00000272793 OTUD6BQ8N6M0 293 aa18.37■□□□□ 0.53
UBR3-201ENST00000272793 PIBF1Q8WXW3 757 aa18.37■□□□□ 0.53
UBR3-201ENST00000272793 PRPF4BQ13523 1007 aaKnown RBP18.36■□□□□ 0.53
UBR3-201ENST00000272793 HSPA4P34932 840 aa18.36■□□□□ 0.53
UBR3-201ENST00000272793 GTF2F1P35269 517 aaKnown RBP eCLIP18.36■□□□□ 0.531e-8■■■■■ 32.5
UBR3-201ENST00000272793 SARNPP82979 210 aaKnown RBP18.36■□□□□ 0.53
UBR3-201ENST00000272793 FILIP1Q7Z7B0 1213 aa18.35■□□□□ 0.53
UBR3-201ENST00000272793 GRPEL1Q9HAV7 217 aa18.35■□□□□ 0.53
UBR3-201ENST00000272793 DYNC1I1O14576 645 aa18.35■□□□□ 0.53
UBR3-201ENST00000272793 NDC80O14777 642 aa18.35■□□□□ 0.53
UBR3-201ENST00000272793 TRIM22Q8IYM9 498 aa18.35■□□□□ 0.53
UBR3-201ENST00000272793 FERMT1Q9BQL6 677 aa18.35■□□□□ 0.53
UBR3-201ENST00000272793 ZMYND15Q9H091 742 aa18.35■□□□□ 0.53
UBR3-201ENST00000272793 PRR16Q569H4 304 aa18.35■□□□□ 0.53
UBR3-201ENST00000272793 FSD1Q9BTV5 496 aa18.35■□□□□ 0.53
UBR3-201ENST00000272793 PPP4R3AQ6IN85 833 aa18.34■□□□□ 0.53
UBR3-201ENST00000272793 NUP155O75694 1391 aa18.34■□□□□ 0.53
UBR3-201ENST00000272793 CFAP100Q494V2 611 aa18.34■□□□□ 0.53
UBR3-201ENST00000272793 ZNF428Q96B54 188 aa18.34■□□□□ 0.53
UBR3-201ENST00000272793 RAB3GAP2Q9H2M9 1393 aa18.34■□□□□ 0.53
UBR3-201ENST00000272793 MAATS1Q7Z4T9 603 aa18.34■□□□□ 0.53
UBR3-201ENST00000272793 SMC6Q96SB8 1091 aa18.34■□□□□ 0.53
UBR3-201ENST00000272793 ZBED9Q6R2W3 1325 aa18.34■□□□□ 0.53
UBR3-201ENST00000272793 USP5P45974 858 aa18.33■□□□□ 0.53
UBR3-201ENST00000272793 ZBTB16Q05516 673 aa18.33■□□□□ 0.52
UBR3-201ENST00000272793 RSPH3Q86UC2 560 aa18.33■□□□□ 0.52
UBR3-201ENST00000272793 VPS36Q86VN1 386 aa18.33■□□□□ 0.52
UBR3-201ENST00000272793 IRX3P78415 501 aaPredicted RBP18.33■□□□□ 0.52
UBR3-201ENST00000272793 KIF5AQ12840 1032 aa18.32■□□□□ 0.52
UBR3-201ENST00000272793 MSL1Q68DK7 614 aa18.32■□□□□ 0.52
UBR3-201ENST00000272793 CCDC63Q8NA47 563 aa18.32■□□□□ 0.52
UBR3-201ENST00000272793 HYPKQ9NX55 129 aa18.32■□□□□ 0.52
UBR3-201ENST00000272793 RIPK4P57078 832 aa18.32■□□□□ 0.52
UBR3-201ENST00000272793 L3MBTL2Q969R5 705 aa18.32■□□□□ 0.52
UBR3-201ENST00000272793 ARHGAP35Q9NRY4 1499 aa18.32■□□□□ 0.52
UBR3-201ENST00000272793 CCDC144CPQ8IYA2 1237 aa18.32■□□□□ 0.52
UBR3-201ENST00000272793 PRPF31Q8WWY3 499 aaKnown RBP18.31■□□□□ 0.52
UBR3-201ENST00000272793 UBA5Q9GZZ9 404 aa18.31■□□□□ 0.52
UBR3-201ENST00000272793 WDR63Q8IWG1 891 aa18.31■□□□□ 0.52
UBR3-201ENST00000272793 KIF4BQ2VIQ3 1234 aa18.31■□□□□ 0.52
UBR3-201ENST00000272793 PAFAH1B1P43034 410 aa18.31■□□□□ 0.52
UBR3-201ENST00000272793 TTC39AQ5SRH9 613 aa18.31■□□□□ 0.52
UBR3-201ENST00000272793 CDC45O75419 566 aa18.3■□□□□ 0.52
UBR3-201ENST00000272793 SETSIPP0DME0 302 aa18.3■□□□□ 0.52
UBR3-201ENST00000272793 PTPN14Q15678 1187 aa18.3■□□□□ 0.52
UBR3-201ENST00000272793 CCDC170Q8IYT3 715 aa18.3■□□□□ 0.52
UBR3-201ENST00000272793 ZSCAN29Q8IWY8 852 aaPredicted RBP18.3■□□□□ 0.52
UBR3-201ENST00000272793 DACT3Q96B18 629 aaPredicted RBP18.3■□□□□ 0.52
UBR3-201ENST00000272793 GMNNO75496 209 aa18.3■□□□□ 0.52
UBR3-201ENST00000272793 ANKS4BQ8N8V4 417 aa18.3■□□□□ 0.52
UBR3-201ENST00000272793 ZMAT2Q96NC0 199 aaKnown RBP18.3■□□□□ 0.52
UBR3-201ENST00000272793 CEP57Q86XR8 500 aa18.3■□□□□ 0.52
UBR3-201ENST00000272793 SMARCC1Q92922 1105 aaPredicted RBP18.3■□□□□ 0.52
UBR3-201ENST00000272793 LRSAM1Q6UWE0 723 aa18.3■□□□□ 0.52
UBR3-201ENST00000272793 IQCGQ9H095 443 aaKnown RBP18.3■□□□□ 0.52
UBR3-201ENST00000272793 NOL7Q9UMY1 257 aaKnown RBP18.3■□□□□ 0.52
UBR3-201ENST00000272793 WASHC2AQ641Q2 1341 aa18.29■□□□□ 0.52
UBR3-201ENST00000272793 SMTNL1A8MU46 457 aa18.29■□□□□ 0.52
UBR3-201ENST00000272793 UPF3BQ9BZI7 483 aaKnown RBP18.29■□□□□ 0.52
UBR3-201ENST00000272793 CCDC57Q2TAC2 916 aa18.29■□□□□ 0.52
UBR3-201ENST00000272793 CEP164Q9UPV0 1460 aa18.29■□□□□ 0.52
UBR3-201ENST00000272793 URI1O94763 535 aaPredicted RBP18.29■□□□□ 0.52
UBR3-201ENST00000272793 ST20-MTHFSA0A0A6YYL1 179 aa18.29■□□□□ 0.52
UBR3-201ENST00000272793 KIF4AO95239 1232 aa18.28■□□□□ 0.52
UBR3-201ENST00000272793 KIF18AQ8NI77 898 aa18.28■□□□□ 0.52
UBR3-201ENST00000272793 CEP112Q8N8E3 955 aa18.28■□□□□ 0.52
UBR3-201ENST00000272793 USO1O60763 962 aaKnown RBP18.28■□□□□ 0.52
UBR3-201ENST00000272793 KLHL10Q6JEL2 608 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms