RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 ZSCAN29Q8IWY8 852 aaPredicted RBP15.49■□□□□ 0.07
PRDM16-201ENST00000270722 UBAC1Q9BSL1 405 aa15.49■□□□□ 0.07
PRDM16-201ENST00000270722 FGFR1OPO95684 399 aaKnown RBP15.49■□□□□ 0.07
PRDM16-201ENST00000270722 RBM25P49756 843 aaKnown RBP15.49■□□□□ 0.07
PRDM16-201ENST00000270722 CCT4P50991 539 aaKnown RBP15.48■□□□□ 0.07
PRDM16-201ENST00000270722 ZNF397Q8NF99 534 aaPredicted RBP15.48■□□□□ 0.07
PRDM16-201ENST00000270722 RBM42Q9BTD8 480 aaKnown RBP15.48■□□□□ 0.07
PRDM16-201ENST00000270722 TRIM5Q9C035 493 aa15.48■□□□□ 0.07
PRDM16-201ENST00000270722 SEC63Q9UGP8 760 aaKnown RBP15.48■□□□□ 0.07
PRDM16-201ENST00000270722 IGHMBP2P38935 993 aaKnown RBP15.47■□□□□ 0.07
PRDM16-201ENST00000270722 STARD3NLO95772 234 aa15.47■□□□□ 0.07
PRDM16-201ENST00000270722 CABP4P57796 275 aa15.47■□□□□ 0.07
PRDM16-201ENST00000270722 CETN1Q12798 172 aa15.47■□□□□ 0.07
PRDM16-201ENST00000270722 GIGYF2Q6Y7W6 1299 aaKnown RBP15.47■□□□□ 0.07
PRDM16-201ENST00000270722 TRAF1Q13077 416 aa15.47■□□□□ 0.07
PRDM16-201ENST00000270722 CFAP45Q9UL16 551 aa15.47■□□□□ 0.07
PRDM16-201ENST00000270722 CCDC196A0A1B0GTZ2 297 aa15.47■□□□□ 0.07
PRDM16-201ENST00000270722 IMMTQ16891 758 aaKnown RBP15.46■□□□□ 0.07
PRDM16-201ENST00000270722 SCLT1Q96NL6 688 aa15.46■□□□□ 0.07
PRDM16-201ENST00000270722 GNAI2P04899 355 aa15.46■□□□□ 0.07
PRDM16-201ENST00000270722 RRP1P56182 461 aaKnown RBP15.46■□□□□ 0.07
PRDM16-201ENST00000270722 TOM1L2Q6ZVM7 507 aa15.46■□□□□ 0.07
PRDM16-201ENST00000270722 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.46■□□□□ 0.07
PRDM16-201ENST00000270722 TTC21AQ8NDW8 1320 aa15.46■□□□□ 0.06
PRDM16-201ENST00000270722 KIF4AO95239 1232 aa15.46■□□□□ 0.06
PRDM16-201ENST00000270722 ANKRD18BA2A2Z9 1011 aa15.45■□□□□ 0.06
PRDM16-201ENST00000270722 BCL2L13Q9BXK5 485 aa15.45■□□□□ 0.06
PRDM16-201ENST00000270722 TANGO6Q9C0B7 1094 aa15.45■□□□□ 0.06
PRDM16-201ENST00000270722 HOMER2Q9NSB8 354 aa15.45■□□□□ 0.06
PRDM16-201ENST00000270722 SURF6O75683 361 aaKnown RBP15.45■□□□□ 0.06
PRDM16-201ENST00000270722 GBP3Q9H0R5 595 aa15.45■□□□□ 0.06
PRDM16-201ENST00000270722 ESCO1Q5FWF5 840 aa15.45■□□□□ 0.06
PRDM16-201ENST00000270722 PPP4R3BQ5MIZ7 849 aa15.45■□□□□ 0.06
PRDM16-201ENST00000270722 PHAXQ9H814 394 aaKnown RBP15.45■□□□□ 0.06
PRDM16-201ENST00000270722 DDX12PQ92771 950 aa15.45■□□□□ 0.06
PRDM16-201ENST00000270722 COG6Q9Y2V7 657 aa15.45■□□□□ 0.06
PRDM16-201ENST00000270722 KIF2AO00139 706 aaPredicted RBP15.45■□□□□ 0.06
PRDM16-201ENST00000270722 WDR78Q5VTH9 848 aa15.45■□□□□ 0.06
PRDM16-201ENST00000270722 NECTIN2Q92692 538 aa15.45■□□□□ 0.06
PRDM16-201ENST00000270722 ZHX3Q9H4I2 956 aa15.45■□□□□ 0.06
PRDM16-201ENST00000270722 PLEKHH2Q8IVE3 1493 aa15.45■□□□□ 0.06
PRDM16-201ENST00000270722 DNAJC21Q5F1R6 531 aaKnown RBP15.45■□□□□ 0.06
PRDM16-201ENST00000270722 PRDM11Q9NQV5 511 aa15.45■□□□□ 0.06
PRDM16-201ENST00000270722 MTMR7Q9Y216 660 aa15.45■□□□□ 0.06
PRDM16-201ENST00000270722 NBPF1Q3BBV0 1214 aa15.44■□□□□ 0.06
PRDM16-201ENST00000270722 MAP9Q49MG5 647 aa15.44■□□□□ 0.06
PRDM16-201ENST00000270722 HOOK3Q86VS8 718 aa15.44■□□□□ 0.06
PRDM16-201ENST00000270722 SSX2IPQ9Y2D8 614 aa15.44■□□□□ 0.06
PRDM16-201ENST00000270722 TAF4BQ92750 862 aa15.44■□□□□ 0.06
PRDM16-201ENST00000270722 A0A1B0GUA9 196 aa15.44■□□□□ 0.06
PRDM16-201ENST00000270722 ZNF428Q96B54 188 aa15.43■□□□□ 0.06
PRDM16-201ENST00000270722 PRPF40AO75400 957 aaKnown RBP15.43■□□□□ 0.06
PRDM16-201ENST00000270722 CCDC192P0DO97 292 aa15.43■□□□□ 0.06
PRDM16-201ENST00000270722 CYP46A1Q9Y6A2 500 aa15.43■□□□□ 0.06
PRDM16-201ENST00000270722 DYNC1I1O14576 645 aa15.43■□□□□ 0.06
PRDM16-201ENST00000270722 ANKLE2Q86XL3 938 aa15.43■□□□□ 0.06
PRDM16-201ENST00000270722 FERMT2Q96AC1 680 aa15.43■□□□□ 0.06
PRDM16-201ENST00000270722 LRCH2Q5VUJ6 765 aa15.43■□□□□ 0.06
PRDM16-201ENST00000270722 STRN4Q9NRL3 753 aa15.43■□□□□ 0.06
PRDM16-201ENST00000270722 CUL5Q93034 780 aa15.42■□□□□ 0.06
PRDM16-201ENST00000270722 DDX46Q7L014 1031 aaKnown RBP15.42■□□□□ 0.06
PRDM16-201ENST00000270722 CEP126Q9P2H0 1117 aa15.42■□□□□ 0.06
PRDM16-201ENST00000270722 ZPR1O75312 459 aa15.42■□□□□ 0.06
PRDM16-201ENST00000270722 GCC1Q96CN9 775 aa15.42■□□□□ 0.06
PRDM16-201ENST00000270722 SERPINC1P01008 464 aa15.42■□□□□ 0.06
PRDM16-201ENST00000270722 APAF1O14727 1248 aa15.42■□□□□ 0.06
PRDM16-201ENST00000270722 PDE4AP27815 886 aa15.42■□□□□ 0.06
PRDM16-201ENST00000270722 STXBP4Q6ZWJ1 553 aa15.42■□□□□ 0.06
PRDM16-201ENST00000270722 SLC52A1Q9NWF4 448 aa15.42■□□□□ 0.06
PRDM16-201ENST00000270722 C22orf23Q9BZE7 217 aa15.41■□□□□ 0.06
PRDM16-201ENST00000270722 AKAP2Q9Y2D5 859 aa15.41■□□□□ 0.06
PRDM16-201ENST00000270722 TXNDC2Q86VQ3 553 aa15.41■□□□□ 0.06
PRDM16-201ENST00000270722 CEP57L1Q8IYX8 460 aa15.41■□□□□ 0.06
PRDM16-201ENST00000270722 PIBF1Q8WXW3 757 aa15.41■□□□□ 0.06
PRDM16-201ENST00000270722 B4DLN1 442 aa15.41■□□□□ 0.06
PRDM16-201ENST00000270722 MRPL12P52815 198 aaKnown RBP15.41■□□□□ 0.06
PRDM16-201ENST00000270722 DMRT2Q9Y5R5 561 aa15.41■□□□□ 0.06
PRDM16-201ENST00000270722 FHOD3Q2V2M9 1422 aa15.41■□□□□ 0.06
PRDM16-201ENST00000270722 ZFYP08048 801 aaPredicted RBP15.41■□□□□ 0.06
PRDM16-201ENST00000270722 KRT85P78386 507 aa15.4■□□□□ 0.06
PRDM16-201ENST00000270722 TAOK3Q9H2K8 898 aa15.4■□□□□ 0.06
PRDM16-201ENST00000270722 ATP2B1P20020 1258 aa15.4■□□□□ 0.06
PRDM16-201ENST00000270722 TTC31Q49AM3 519 aaPredicted RBP15.4■□□□□ 0.06
PRDM16-201ENST00000270722 CAVIN4Q5BKX8 364 aa15.4■□□□□ 0.06
PRDM16-201ENST00000270722 CNTLNQ9NXG0 1405 aa15.4■□□□□ 0.06
PRDM16-201ENST00000270722 TMCO3Q6UWJ1 677 aa15.4■□□□□ 0.06
PRDM16-201ENST00000270722 RSRC1Q96IZ7 334 aaKnown RBP15.4■□□□□ 0.06
PRDM16-201ENST00000270722 HDGFL1Q5TGJ6 251 aa15.4■□□□□ 0.06
PRDM16-201ENST00000270722 SREK1Q8WXA9 508 aaKnown RBP15.4■□□□□ 0.06
PRDM16-201ENST00000270722 CRACR2BQ8N4Y2 399 aaPredicted RBP15.39■□□□□ 0.05
PRDM16-201ENST00000270722 USP37Q86T82 979 aa15.39■□□□□ 0.05
PRDM16-201ENST00000270722 TOP2AP11388 1531 aaKnown RBP15.39■□□□□ 0.05
PRDM16-201ENST00000270722 BRPF1P55201 1214 aaPredicted RBP15.39■□□□□ 0.05
PRDM16-201ENST00000270722 FMNL3Q8IVF7 1028 aa15.39■□□□□ 0.05
PRDM16-201ENST00000270722 PPFIBP2Q8ND30 876 aa15.39■□□□□ 0.05
PRDM16-201ENST00000270722 CCDC12Q8WUD4 166 aaPredicted RBP15.38■□□□□ 0.05
PRDM16-201ENST00000270722 TSG101Q99816 390 aa15.38■□□□□ 0.05
PRDM16-201ENST00000270722 LRP2BPQ9P2M1 347 aa15.38■□□□□ 0.05
PRDM16-201ENST00000270722 WDR33Q9C0J8 1336 aaKnown RBP15.38■□□□□ 0.05
PRDM16-201ENST00000270722 SMTNL1A8MU46 457 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms