RNA–Protein interactions for RNA: ENST00000264694.12

SNX25-201, Transcript of sorting nexin 25, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX25, Length 3,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-201ENST00000264694 CDK19Q9BWU1 502 aa16.21■□□□□ 0.19
SNX25-201ENST00000264694 GDPD2Q9HCC8 539 aa16.21■□□□□ 0.19
SNX25-201ENST00000264694 PRDM4Q9UKN5 801 aa16.21■□□□□ 0.19
SNX25-201ENST00000264694 UHRF1BP1LA0JNW5 1464 aa16.21■□□□□ 0.19
SNX25-201ENST00000264694 CD163L1Q9NR16 1453 aa16.21■□□□□ 0.19
SNX25-201ENST00000264694 CSPP1Q1MSJ5 1256 aa16.21■□□□□ 0.19
SNX25-201ENST00000264694 MAP7D2Q96T17 732 aa16.21■□□□□ 0.19
SNX25-201ENST00000264694 DNTTIP2Q5QJE6 756 aaKnown RBP16.2■□□□□ 0.18
SNX25-201ENST00000264694 ZNF830Q96NB3 372 aaPredicted RBP16.2■□□□□ 0.18
SNX25-201ENST00000264694 ANKRD44Q8N8A2 993 aa16.2■□□□□ 0.18
SNX25-201ENST00000264694 ZNF853P0CG23 659 aa16.2■□□□□ 0.18
SNX25-201ENST00000264694 CEP85Q6P2H3 762 aa16.2■□□□□ 0.18
SNX25-201ENST00000264694 SASS6Q6UVJ0 657 aa16.2■□□□□ 0.18
SNX25-201ENST00000264694 TMX3Q96JJ7 454 aa16.2■□□□□ 0.18
SNX25-201ENST00000264694 LMTK2Q8IWU2 1503 aa16.19■□□□□ 0.18
SNX25-201ENST00000264694 ABCA9Q8IUA7 1624 aa16.19■□□□□ 0.18
SNX25-201ENST00000264694 DYNC1I1O14576 645 aa16.19■□□□□ 0.18
SNX25-201ENST00000264694 REC8O95072 547 aa16.19■□□□□ 0.18
SNX25-201ENST00000264694 IDI1Q13907 227 aa16.19■□□□□ 0.18
SNX25-201ENST00000264694 MEIS3Q99687 375 aa16.19■□□□□ 0.18
SNX25-201ENST00000264694 ZRANB1Q9UGI0 708 aa16.19■□□□□ 0.18
SNX25-201ENST00000264694 KNDC1Q76NI1 1749 aa16.19■□□□□ 0.18
SNX25-201ENST00000264694 ERC2O15083 957 aa16.18■□□□□ 0.18
SNX25-201ENST00000264694 CFAP44Q96MT7 982 aa16.18■□□□□ 0.18
SNX25-201ENST00000264694 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.18■□□□□ 0.18
SNX25-201ENST00000264694 KIDINS220Q9ULH0 1771 aa16.18■□□□□ 0.18
SNX25-201ENST00000264694 TSPY26PQ9H489 355 aa16.18■□□□□ 0.18
SNX25-201ENST00000264694 C17orf53Q8N3J3 647 aaPredicted RBP16.16■□□□□ 0.18
SNX25-201ENST00000264694 FAM177BA6PVY3 158 aa16.16■□□□□ 0.18
SNX25-201ENST00000264694 GADD45BO75293 160 aaPredicted RBP16.16■□□□□ 0.18
SNX25-201ENST00000264694 MBD3O95983 291 aa16.16■□□□□ 0.18
SNX25-201ENST00000264694 MCM5P33992 734 aa16.16■□□□□ 0.18
SNX25-201ENST00000264694 ATP10DQ9P241 1426 aa16.16■□□□□ 0.18
SNX25-201ENST00000264694 MSH6P52701 1360 aa16.15■□□□□ 0.18
SNX25-201ENST00000264694 KIAA2012Q0VF49 1180 aa16.15■□□□□ 0.18
SNX25-201ENST00000264694 RRS1Q15050 365 aaKnown RBP16.15■□□□□ 0.18
SNX25-201ENST00000264694 PALD1Q9ULE6 856 aa16.15■□□□□ 0.18
SNX25-201ENST00000264694 IL13P35225 146 aa16.15■□□□□ 0.18
SNX25-201ENST00000264694 ZFYVE9O95405 1425 aa16.15■□□□□ 0.18
SNX25-201ENST00000264694 YTHDC2Q9H6S0 1430 aaKnown RBP16.14■□□□□ 0.17
SNX25-201ENST00000264694 NEXMIFQ5QGS0 1516 aa16.14■□□□□ 0.17
SNX25-201ENST00000264694 NME9Q86XW9 330 aa16.14■□□□□ 0.17
SNX25-201ENST00000264694 RPAP2Q8IXW5 612 aaPredicted RBP16.14■□□□□ 0.17
SNX25-201ENST00000264694 BRD1O95696 1058 aa16.14■□□□□ 0.17
SNX25-201ENST00000264694 UPF3BQ9BZI7 483 aaKnown RBP16.14■□□□□ 0.17
SNX25-201ENST00000264694 REREQ9P2R6 1566 aa16.14■□□□□ 0.17
SNX25-201ENST00000264694 ABCC3O15438 1527 aa16.13■□□□□ 0.17
SNX25-201ENST00000264694 SLC4A10Q6U841 1118 aa16.13■□□□□ 0.17
SNX25-201ENST00000264694 ZHX1Q9UKY1 873 aaPredicted RBP16.13■□□□□ 0.17
SNX25-201ENST00000264694 USP25Q9UHP3 1055 aa16.13■□□□□ 0.17
SNX25-201ENST00000264694 RTL1A6NKG5 1358 aa16.13■□□□□ 0.17
SNX25-201ENST00000264694 WAPLQ7Z5K2 1190 aa16.13■□□□□ 0.17
SNX25-201ENST00000264694 TTC12Q9H892 705 aaPredicted RBP16.13■□□□□ 0.17
SNX25-201ENST00000264694 RIMS2Q9UQ26 1411 aa16.12■□□□□ 0.17
SNX25-201ENST00000264694 EXOC6BQ9Y2D4 811 aa16.12■□□□□ 0.17
SNX25-201ENST00000264694 PDE1AP54750 535 aa16.12■□□□□ 0.17
SNX25-201ENST00000264694 ANO2Q9NQ90 1003 aa16.12■□□□□ 0.17
SNX25-201ENST00000264694 PTPRMP28827 1452 aa16.12■□□□□ 0.17
SNX25-201ENST00000264694 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.11■□□□□ 0.17
SNX25-201ENST00000264694 LMOD3Q0VAK6 560 aa16.11■□□□□ 0.17
SNX25-201ENST00000264694 MCM10Q7L590 875 aa16.11■□□□□ 0.17
SNX25-201ENST00000264694 RILPL2Q969X0 211 aa16.11■□□□□ 0.17
SNX25-201ENST00000264694 F6X3S4 739 aa16.11■□□□□ 0.17
SNX25-201ENST00000264694 PLCB2Q00722 1185 aa16.11■□□□□ 0.17
SNX25-201ENST00000264694 USP48Q86UV5 1035 aa16.1■□□□□ 0.17
SNX25-201ENST00000264694 AEBP1Q8IUX7 1158 aa16.1■□□□□ 0.17
SNX25-201ENST00000264694 MTERF4Q7Z6M4 381 aaKnown RBP16.1■□□□□ 0.17
SNX25-201ENST00000264694 TRIM6-TRIM34B2RNG4 842 aa16.09■□□□□ 0.17
SNX25-201ENST00000264694 MIS18AQ9NYP9 233 aa16.09■□□□□ 0.17
SNX25-201ENST00000264694 ANKRD26Q9UPS8 1709 aa16.09■□□□□ 0.17
SNX25-201ENST00000264694 DTNBO60941 627 aa16.09■□□□□ 0.17
SNX25-201ENST00000264694 SMAP1Q8IYB5 467 aaPredicted RBP16.09■□□□□ 0.17
SNX25-201ENST00000264694 SYAP1Q96A49 352 aaPredicted RBP16.09■□□□□ 0.17
SNX25-201ENST00000264694 MYRIPQ8NFW9 859 aa16.09■□□□□ 0.17
SNX25-201ENST00000264694 ESYT1Q9BSJ8 1104 aa16.09■□□□□ 0.17
SNX25-201ENST00000264694 RGS12O14924 1447 aa16.09■□□□□ 0.17
SNX25-201ENST00000264694 FRMPD1Q5SYB0 1578 aa16.09■□□□□ 0.17
SNX25-201ENST00000264694 CDC42BPGQ6DT37 1551 aa16.08■□□□□ 0.17
SNX25-201ENST00000264694 ARHGEF40Q8TER5 1519 aa16.08■□□□□ 0.17
SNX25-201ENST00000264694 SIGLEC1Q9BZZ2 1709 aa16.08■□□□□ 0.16
SNX25-201ENST00000264694 KIF24Q5T7B8 1368 aa16.08■□□□□ 0.16
SNX25-201ENST00000264694 SLC4A2P04920 1241 aa16.08■□□□□ 0.16
SNX25-201ENST00000264694 LARP6Q9BRS8 491 aaKnown RBP16.08■□□□□ 0.16
SNX25-201ENST00000264694 ASXL2Q76L83 1435 aa16.08■□□□□ 0.16
SNX25-201ENST00000264694 RAPGEF3O95398 923 aa16.07■□□□□ 0.16
SNX25-201ENST00000264694 CUL4AQ13619 759 aa16.07■□□□□ 0.16
SNX25-201ENST00000264694 CCDC94Q9BW85 323 aaPredicted RBP16.07■□□□□ 0.16
SNX25-201ENST00000264694 POGZQ7Z3K3 1410 aa16.07■□□□□ 0.16
SNX25-201ENST00000264694 YEATS2Q9ULM3 1422 aa16.07■□□□□ 0.16
SNX25-201ENST00000264694 ADCY5O95622 1261 aa16.07■□□□□ 0.16
SNX25-201ENST00000264694 HCLS1P14317 486 aaPredicted RBP16.07■□□□□ 0.16
SNX25-201ENST00000264694 NOLC1Q14978 699 aaKnown RBP eCLIP16.07■□□□□ 0.16
SNX25-201ENST00000264694 ZNF710Q8N1W2 664 aa16.07■□□□□ 0.16
SNX25-201ENST00000264694 NCKAP5LQ9HCH0 1330 aa16.07■□□□□ 0.16
SNX25-201ENST00000264694 CBX1P83916 185 aa16.07■□□□□ 0.16
SNX25-201ENST00000264694 G2E3Q7L622 706 aa16.07■□□□□ 0.16
SNX25-201ENST00000264694 MCCP23508 829 aa16.06■□□□□ 0.16
SNX25-201ENST00000264694 HMMRO75330 724 aa16.06■□□□□ 0.16
SNX25-201ENST00000264694 FGD1P98174 961 aa16.06■□□□□ 0.16
SNX25-201ENST00000264694 HECW2Q9P2P5 1572 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms