RNA–Protein interactions for RNA: ENST00000264414.8

CUL3-201, Transcript of cullin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL3, Length 6,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-201ENST00000264414 JMYQ8N9B5 988 aa17.36■□□□□ 0.37
CUL3-201ENST00000264414 IDH1O75874 414 aaKnown RBP17.36■□□□□ 0.37
CUL3-201ENST00000264414 IFFO1Q0D2I5 559 aa17.36■□□□□ 0.37
CUL3-201ENST00000264414 LARP1Q6PKG0 1096 aaKnown RBP17.36■□□□□ 0.37
CUL3-201ENST00000264414 MMRN2Q9H8L6 949 aa17.36■□□□□ 0.37
CUL3-201ENST00000264414 C11orf95C9JLR9 678 aaPredicted RBP17.36■□□□□ 0.37
CUL3-201ENST00000264414 TMCO3Q6UWJ1 677 aa17.35■□□□□ 0.37
CUL3-201ENST00000264414 PUF60Q9UHX1 559 aaKnown RBP17.35■□□□□ 0.37
CUL3-201ENST00000264414 XPCQ01831 940 aaPredicted RBP17.35■□□□□ 0.37
CUL3-201ENST00000264414 CRACR2BQ8N4Y2 399 aaPredicted RBP17.35■□□□□ 0.37
CUL3-201ENST00000264414 MINDY4BA8MYZ0 360 aa17.35■□□□□ 0.37
CUL3-201ENST00000264414 PPP4R3AQ6IN85 833 aa17.35■□□□□ 0.37
CUL3-201ENST00000264414 FERMT2Q96AC1 680 aa17.34■□□□□ 0.37
CUL3-201ENST00000264414 AACSQ86V21 672 aa17.34■□□□□ 0.37
CUL3-201ENST00000264414 CCDC96Q2M329 555 aa17.34■□□□□ 0.37
CUL3-201ENST00000264414 USP8P40818 1118 aa17.34■□□□□ 0.37
CUL3-201ENST00000264414 IPO4Q8TEX9 1081 aaKnown RBP17.33■□□□□ 0.37
CUL3-201ENST00000264414 SPATA32Q96LK8 384 aa17.33■□□□□ 0.37
CUL3-201ENST00000264414 NOB1Q9ULX3 412 aaKnown RBP17.33■□□□□ 0.37
CUL3-201ENST00000264414 POLR3DP05423 398 aaPredicted RBP17.33■□□□□ 0.36
CUL3-201ENST00000264414 GPATCH11Q8N954 259 aa17.33■□□□□ 0.36
CUL3-201ENST00000264414 BCAR3O75815 825 aa17.33■□□□□ 0.36
CUL3-201ENST00000264414 SLC4A2P04920 1241 aa17.33■□□□□ 0.36
CUL3-201ENST00000264414 CFAP100Q494V2 611 aa17.33■□□□□ 0.36
CUL3-201ENST00000264414 CPLX3Q8WVH0 158 aa17.33■□□□□ 0.36
CUL3-201ENST00000264414 GUCY1B3Q02153 619 aa17.32■□□□□ 0.36
CUL3-201ENST00000264414 KIF7Q2M1P5 1343 aa17.32■□□□□ 0.36
CUL3-201ENST00000264414 CBX1P83916 185 aa17.32■□□□□ 0.36
CUL3-201ENST00000264414 ARHGAP29Q52LW3 1261 aa17.32■□□□□ 0.36
CUL3-201ENST00000264414 CCDC148Q8NFR7 591 aa17.32■□□□□ 0.36
CUL3-201ENST00000264414 RAD54L2Q9Y4B4 1467 aa17.32■□□□□ 0.36
CUL3-201ENST00000264414 PABPN1LA6NDY0 278 aaKnown RBP17.32■□□□□ 0.36
CUL3-201ENST00000264414 ZNF397Q8NF99 534 aaPredicted RBP17.32■□□□□ 0.36
CUL3-201ENST00000264414 CBFA2T2O43439 604 aa17.32■□□□□ 0.36
CUL3-201ENST00000264414 PPM1EQ8WY54 764 aa17.32■□□□□ 0.36
CUL3-201ENST00000264414 HIP1O00291 1037 aa17.31■□□□□ 0.36
CUL3-201ENST00000264414 GNAI2P04899 355 aa17.31■□□□□ 0.36
CUL3-201ENST00000264414 PDCP20941 246 aa17.31■□□□□ 0.36
CUL3-201ENST00000264414 PRPF4BQ13523 1007 aaKnown RBP17.31■□□□□ 0.36
CUL3-201ENST00000264414 IQCEQ6IPM2 695 aa17.31■□□□□ 0.36
CUL3-201ENST00000264414 CACNA2D4Q7Z3S7 1137 aa17.31■□□□□ 0.36
CUL3-201ENST00000264414 TXLNBQ8N3L3 684 aa17.31■□□□□ 0.36
CUL3-201ENST00000264414 TSR2Q969E8 191 aaKnown RBP17.31■□□□□ 0.36
CUL3-201ENST00000264414 JAKMIP1Q96N16 626 aaKnown RBP17.31■□□□□ 0.36
CUL3-201ENST00000264414 TATP17735 454 aaPredicted RBP17.31■□□□□ 0.36
CUL3-201ENST00000264414 PLEKHO1Q53GL0 409 aaPredicted RBP17.31■□□□□ 0.36
CUL3-201ENST00000264414 UPF3BQ9BZI7 483 aaKnown RBP17.31■□□□□ 0.36
CUL3-201ENST00000264414 POLR3GO15318 223 aaPredicted RBP17.31■□□□□ 0.36
CUL3-201ENST00000264414 HOOK3Q86VS8 718 aa17.31■□□□□ 0.36
CUL3-201ENST00000264414 ATP2C2O75185 946 aa17.31■□□□□ 0.36
CUL3-201ENST00000264414 TNIP1Q15025 636 aa17.3■□□□□ 0.36
CUL3-201ENST00000264414 LMAN1P49257 510 aa17.3■□□□□ 0.36
CUL3-201ENST00000264414 SEC63Q9UGP8 760 aaKnown RBP17.3■□□□□ 0.36
CUL3-201ENST00000264414 CETN2P41208 172 aa17.3■□□□□ 0.36
CUL3-201ENST00000264414 IL27Q8NEV9 243 aa17.3■□□□□ 0.36
CUL3-201ENST00000264414 TMOD2Q9NZR1 351 aa17.3■□□□□ 0.36
CUL3-201ENST00000264414 LUZP1Q86V48 1076 aa17.3■□□□□ 0.36
CUL3-201ENST00000264414 PDZRN3Q9UPQ7 1066 aa17.3■□□□□ 0.36
CUL3-201ENST00000264414 RUSC2Q8N2Y8 1516 aa17.29■□□□□ 0.36
CUL3-201ENST00000264414 VTI1AQ96AJ9 217 aa17.29■□□□□ 0.36
CUL3-201ENST00000264414 CRACR2AQ9BSW2 395 aa17.29■□□□□ 0.36
CUL3-201ENST00000264414 IL1RAPL2Q9NP60 686 aa17.29■□□□□ 0.36
CUL3-201ENST00000264414 USP47Q96K76 1375 aa17.29■□□□□ 0.36
CUL3-201ENST00000264414 SPA17Q15506 151 aa17.29■□□□□ 0.36
CUL3-201ENST00000264414 HDGFL1Q5TGJ6 251 aa17.29■□□□□ 0.36
CUL3-201ENST00000264414 PROSER2Q86WR7 435 aaPredicted RBP17.29■□□□□ 0.36
CUL3-201ENST00000264414 PKNOX2Q96KN3 472 aa17.29■□□□□ 0.36
CUL3-201ENST00000264414 PDRG1Q9NUG6 133 aa17.29■□□□□ 0.36
CUL3-201ENST00000264414 GNAI3P08754 354 aa17.29■□□□□ 0.36
CUL3-201ENST00000264414 CASQ1P31415 396 aa17.28■□□□□ 0.36
CUL3-201ENST00000264414 ZNF526Q8TF50 670 aaPredicted RBP17.28■□□□□ 0.36
CUL3-201ENST00000264414 ANKIB1Q9P2G1 1089 aa17.28■□□□□ 0.36
CUL3-201ENST00000264414 TOP2AP11388 1531 aaKnown RBP17.28■□□□□ 0.36
CUL3-201ENST00000264414 EXOSC9Q06265 439 aaKnown RBP17.28■□□□□ 0.36
CUL3-201ENST00000264414 WWC3Q9ULE0 1092 aa17.28■□□□□ 0.36
CUL3-201ENST00000264414 PPP1R12BO60237 982 aaPredicted RBP17.28■□□□□ 0.36
CUL3-201ENST00000264414 CCDC150Q8NCX0 1101 aa17.28■□□□□ 0.36
CUL3-201ENST00000264414 MKNK2Q9HBH9 465 aa17.28■□□□□ 0.36
CUL3-201ENST00000264414 MBD3O95983 291 aa17.27■□□□□ 0.36
CUL3-201ENST00000264414 UACAQ9BZF9 1416 aa17.27■□□□□ 0.36
CUL3-201ENST00000264414 PRKAR2BP31323 418 aa17.27■□□□□ 0.36
CUL3-201ENST00000264414 MTHFSP49914 203 aa17.27■□□□□ 0.36
CUL3-201ENST00000264414 KRT85P78386 507 aa17.27■□□□□ 0.36
CUL3-201ENST00000264414 TWISTNBQ3B726 338 aaPredicted RBP17.27■□□□□ 0.35
CUL3-201ENST00000264414 PRKRIP1Q9H875 184 aaPredicted RBP17.27■□□□□ 0.35
CUL3-201ENST00000264414 TDRD12Q587J7 1177 aaKnown RBP17.27■□□□□ 0.35
CUL3-201ENST00000264414 OTUD6BQ8N6M0 293 aa17.27■□□□□ 0.35
CUL3-201ENST00000264414 SHTN1A0MZ66 631 aa17.26■□□□□ 0.35
CUL3-201ENST00000264414 RGS22Q8NE09 1264 aa17.26■□□□□ 0.35
CUL3-201ENST00000264414 SMARCA2P51531 1590 aa17.26■□□□□ 0.35
CUL3-201ENST00000264414 ZWINTO95229 277 aa17.26■□□□□ 0.35
CUL3-201ENST00000264414 TMCO4Q5TGY1 634 aa17.26■□□□□ 0.35
CUL3-201ENST00000264414 NUTM1Q86Y26 1132 aa17.26■□□□□ 0.35
CUL3-201ENST00000264414 FAM107BQ9H098 131 aa17.26■□□□□ 0.35
CUL3-201ENST00000264414 VAT1LQ9HCJ6 419 aa17.26■□□□□ 0.35
CUL3-201ENST00000264414 PAIP2Q9BPZ3 127 aaKnown RBP17.26■□□□□ 0.35
CUL3-201ENST00000264414 SSX2IPQ9Y2D8 614 aa17.26■□□□□ 0.35
CUL3-201ENST00000264414 GPRASP1Q5JY77 1395 aa17.26■□□□□ 0.35
CUL3-201ENST00000264414 AIDAQ96BJ3 306 aa17.25■□□□□ 0.35
CUL3-201ENST00000264414 FERP16591 822 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms