RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 EVC2Q86UK5 1308 aa12.61□□□□□ -0.39
SLC6A4-201ENST00000261707 CFAP100Q494V2 611 aa12.61□□□□□ -0.39
SLC6A4-201ENST00000261707 TMOD2Q9NZR1 351 aa12.6□□□□□ -0.39
SLC6A4-201ENST00000261707 STIM1Q13586 685 aa12.6□□□□□ -0.39
SLC6A4-201ENST00000261707 AIMP1Q12904 312 aaKnown RBP12.6□□□□□ -0.39
SLC6A4-201ENST00000261707 TRMT1Q9NXH9 659 aaKnown RBP12.6□□□□□ -0.39
SLC6A4-201ENST00000261707 VGFO15240 615 aaPredicted RBP12.6□□□□□ -0.39
SLC6A4-201ENST00000261707 MATR3P43243 847 aaKnown RBP eCLIP12.6□□□□□ -0.39
SLC6A4-201ENST00000261707 DDX54Q8TDD1 881 aaKnown RBP12.6□□□□□ -0.39
SLC6A4-201ENST00000261707 IVLP07476 585 aa12.6□□□□□ -0.39
SLC6A4-201ENST00000261707 CDK5RAP3Q96JB5 506 aa12.6□□□□□ -0.39
SLC6A4-201ENST00000261707 PAXBP1Q9Y5B6 917 aa12.6□□□□□ -0.39
SLC6A4-201ENST00000261707 TAF4BQ92750 862 aa12.59□□□□□ -0.39
SLC6A4-201ENST00000261707 NEUROD6Q96NK8 337 aa12.59□□□□□ -0.39
SLC6A4-201ENST00000261707 CTR9Q6PD62 1173 aa12.59□□□□□ -0.39
SLC6A4-201ENST00000261707 TNPO1Q92973 898 aaKnown RBP12.59□□□□□ -0.39
SLC6A4-201ENST00000261707 CHD1LQ86WJ1 897 aa12.59□□□□□ -0.39
SLC6A4-201ENST00000261707 SMAP1Q8IYB5 467 aaPredicted RBP12.59□□□□□ -0.39
SLC6A4-201ENST00000261707 KIF4BQ2VIQ3 1234 aa12.59□□□□□ -0.39
SLC6A4-201ENST00000261707 TANGO6Q9C0B7 1094 aa12.59□□□□□ -0.39
SLC6A4-201ENST00000261707 NOB1Q9ULX3 412 aaKnown RBP12.59□□□□□ -0.39
SLC6A4-201ENST00000261707 SLC3A2P08195 630 aaKnown RBP12.59□□□□□ -0.39
SLC6A4-201ENST00000261707 CEP135Q66GS9 1140 aa12.59□□□□□ -0.39
SLC6A4-201ENST00000261707 SCLT1Q96NL6 688 aa12.59□□□□□ -0.39
SLC6A4-201ENST00000261707 TSPYL4Q9UJ04 414 aa12.59□□□□□ -0.39
SLC6A4-201ENST00000261707 NEMFO60524 1076 aa12.58□□□□□ -0.39
SLC6A4-201ENST00000261707 ADCY5O95622 1261 aa12.58□□□□□ -0.4
SLC6A4-201ENST00000261707 CCDC113Q9H0I3 377 aa12.58□□□□□ -0.4
SLC6A4-201ENST00000261707 DRC1Q96MC2 740 aa12.58□□□□□ -0.4
SLC6A4-201ENST00000261707 TTC31Q49AM3 519 aaPredicted RBP12.58□□□□□ -0.4
SLC6A4-201ENST00000261707 ZSCAN31Q96LW9 406 aaPredicted RBP12.58□□□□□ -0.4
SLC6A4-201ENST00000261707 TRIM21P19474 475 aaKnown RBP12.57□□□□□ -0.4
SLC6A4-201ENST00000261707 CCDC91Q7Z6B0 441 aa12.57□□□□□ -0.4
SLC6A4-201ENST00000261707 ZNF526Q8TF50 670 aaPredicted RBP12.57□□□□□ -0.4
SLC6A4-201ENST00000261707 SART3Q15020 963 aaKnown RBP12.57□□□□□ -0.4
SLC6A4-201ENST00000261707 LUZP1Q86V48 1076 aa12.57□□□□□ -0.4
SLC6A4-201ENST00000261707 PDRG1Q9NUG6 133 aa12.57□□□□□ -0.4
SLC6A4-201ENST00000261707 UACAQ9BZF9 1416 aa12.57□□□□□ -0.4
SLC6A4-201ENST00000261707 TDO2P48775 406 aa12.57□□□□□ -0.4
SLC6A4-201ENST00000261707 TMX1Q9H3N1 280 aa12.57□□□□□ -0.4
SLC6A4-201ENST00000261707 SURF6O75683 361 aaKnown RBP12.57□□□□□ -0.4
SLC6A4-201ENST00000261707 SSFA2P28290 1259 aa12.57□□□□□ -0.4
SLC6A4-201ENST00000261707 BICDL1Q6ZP65 573 aa12.57□□□□□ -0.4
SLC6A4-201ENST00000261707 VTI1AQ96AJ9 217 aa12.57□□□□□ -0.4
SLC6A4-201ENST00000261707 PPP6R1Q9UPN7 881 aa12.57□□□□□ -0.4
SLC6A4-201ENST00000261707 BCCIPQ9P287 314 aaKnown RBP eCLIP12.57□□□□□ -0.4
SLC6A4-201ENST00000261707 RSPH14Q9UHP6 348 aa12.57□□□□□ -0.4
SLC6A4-201ENST00000261707 NGLY1Q96IV0 654 aa12.57□□□□□ -0.4
SLC6A4-201ENST00000261707 RAI14Q9P0K7 980 aa12.57□□□□□ -0.4
SLC6A4-201ENST00000261707 ADAMTS2O95450 1211 aa12.56□□□□□ -0.4
SLC6A4-201ENST00000261707 ZNF219Q9P2Y4 722 aaPredicted RBP12.56□□□□□ -0.4
SLC6A4-201ENST00000261707 GNAI3P08754 354 aa12.56□□□□□ -0.4
SLC6A4-201ENST00000261707 EXOSC9Q06265 439 aaKnown RBP12.56□□□□□ -0.4
SLC6A4-201ENST00000261707 SNW1Q13573 536 aaKnown RBP12.56□□□□□ -0.4
SLC6A4-201ENST00000261707 SMC1AQ14683 1233 aaKnown RBP12.56□□□□□ -0.4
SLC6A4-201ENST00000261707 ANO10Q9NW15 660 aa12.56□□□□□ -0.4
SLC6A4-201ENST00000261707 CCDC175P0C221 793 aa12.55□□□□□ -0.4
SLC6A4-201ENST00000261707 GNL3LQ9NVN8 582 aaKnown RBP12.55□□□□□ -0.4
SLC6A4-201ENST00000261707 IFFO1Q0D2I5 559 aa12.55□□□□□ -0.4
SLC6A4-201ENST00000261707 CEP63Q96MT8 703 aa12.55□□□□□ -0.4
SLC6A4-201ENST00000261707 TBC1D2Q9BYX2 928 aa12.55□□□□□ -0.4
SLC6A4-201ENST00000261707 C11orf95C9JLR9 678 aaPredicted RBP12.55□□□□□ -0.4
SLC6A4-201ENST00000261707 MVPQ14764 893 aaKnown RBP12.55□□□□□ -0.4
SLC6A4-201ENST00000261707 GIGYF2Q6Y7W6 1299 aaKnown RBP12.55□□□□□ -0.4
SLC6A4-201ENST00000261707 TOP1P11387 765 aaKnown RBP12.55□□□□□ -0.4
SLC6A4-201ENST00000261707 MICALL1Q8N3F8 863 aa12.55□□□□□ -0.4
SLC6A4-201ENST00000261707 IMMTQ16891 758 aaKnown RBP12.54□□□□□ -0.4
SLC6A4-201ENST00000261707 KRT18P05783 430 aaKnown RBP12.54□□□□□ -0.4
SLC6A4-201ENST00000261707 EIF5P55010 431 aaKnown RBP12.54□□□□□ -0.4
SLC6A4-201ENST00000261707 XRCC6P12956 609 aaKnown RBP eCLIP12.54□□□□□ -0.4
SLC6A4-201ENST00000261707 PDIA4P13667 645 aaKnown RBP12.54□□□□□ -0.4
SLC6A4-201ENST00000261707 UVSSAQ2YD98 709 aa12.54□□□□□ -0.4
SLC6A4-201ENST00000261707 TCP11L2Q8N4U5 519 aa12.54□□□□□ -0.4
SLC6A4-201ENST00000261707 HMOX1P09601 288 aa12.54□□□□□ -0.4
SLC6A4-201ENST00000261707 GSDMDP57764 484 aa12.54□□□□□ -0.4
SLC6A4-201ENST00000261707 SPATA24Q86W54 205 aa12.54□□□□□ -0.4
SLC6A4-201ENST00000261707 MAP4K4O95819 1239 aaPredicted RBP12.53□□□□□ -0.4
SLC6A4-201ENST00000261707 ZNF397Q8NF99 534 aaPredicted RBP12.53□□□□□ -0.4
SLC6A4-201ENST00000261707 NOLC1Q14978 699 aaKnown RBP eCLIP12.53□□□□□ -0.4
SLC6A4-201ENST00000261707 BIN2Q9UBW5 565 aaPredicted RBP12.53□□□□□ -0.4
SLC6A4-201ENST00000261707 GCOM1H8Y6P7 765 aaPredicted RBP12.53□□□□□ -0.4
SLC6A4-201ENST00000261707 MYZAPP0CAP1 466 aa12.53□□□□□ -0.4
SLC6A4-201ENST00000261707 HSPA4P34932 840 aa12.53□□□□□ -0.4
SLC6A4-201ENST00000261707 ABTB2Q8N961 1025 aa12.53□□□□□ -0.4
SLC6A4-201ENST00000261707 SPA17Q15506 151 aa12.53□□□□□ -0.4
SLC6A4-201ENST00000261707 GNAI2P04899 355 aa12.52□□□□□ -0.4
SLC6A4-201ENST00000261707 TXNDC2Q86VQ3 553 aa12.52□□□□□ -0.4
SLC6A4-201ENST00000261707 JAKMIP1Q96N16 626 aaKnown RBP12.52□□□□□ -0.4
SLC6A4-201ENST00000261707 CNNM1Q9NRU3 951 aa12.52□□□□□ -0.4
SLC6A4-201ENST00000261707 ZSCAN23Q3MJ62 389 aa12.52□□□□□ -0.4
SLC6A4-201ENST00000261707 JPH4Q96JJ6 628 aa12.52□□□□□ -0.4
SLC6A4-201ENST00000261707 RASSF4Q9H2L5 321 aa12.52□□□□□ -0.4
SLC6A4-201ENST00000261707 TBC1D2BQ9UPU7 963 aa12.52□□□□□ -0.4
SLC6A4-201ENST00000261707 SPECC1LQ69YQ0 1117 aa12.52□□□□□ -0.41
SLC6A4-201ENST00000261707 TATP17735 454 aaPredicted RBP12.52□□□□□ -0.41
SLC6A4-201ENST00000261707 GOPCQ9HD26 462 aa12.52□□□□□ -0.41
SLC6A4-201ENST00000261707 SEPT11Q9NVA2 429 aaKnown RBP12.52□□□□□ -0.41
SLC6A4-201ENST00000261707 FHOD3Q2V2M9 1422 aa12.52□□□□□ -0.41
SLC6A4-201ENST00000261707 PPP2R1AP30153 589 aa12.52□□□□□ -0.41
SLC6A4-201ENST00000261707 CCDC83Q8IWF9 413 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms