RNA–Protein interactions for RNA: ENST00000254271.8

LRRC9-201, Transcript of leucine rich repeat containing 9, humanhuman

TSL 2

Gene LRRC9, Length 4,915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC9-201ENST00000254271 UNC5CLQ8IV45 518 aa3.63□□□□□ -1.83
LRRC9-201ENST00000254271 CACNA1FO60840 1977 aa3.63□□□□□ -1.83
LRRC9-201ENST00000254271 INSRP06213 1382 aa3.62□□□□□ -1.83
LRRC9-201ENST00000254271 TMEM132EQ6IEE7 984 aa3.62□□□□□ -1.83
LRRC9-201ENST00000254271 PPP4R3CPQ6ZMV5 832 aa3.62□□□□□ -1.83
LRRC9-201ENST00000254271 TONSLQ96HA7 1378 aa3.62□□□□□ -1.83
LRRC9-201ENST00000254271 DDX60LQ5H9U9 1706 aaKnown RBP3.62□□□□□ -1.83
LRRC9-201ENST00000254271 CHIC2Q9UKJ5 165 aa3.62□□□□□ -1.83
LRRC9-201ENST00000254271 CSMD2Q7Z408 3487 aa3.62□□□□□ -1.83
LRRC9-201ENST00000254271 ARHGEF25Q86VW2 580 aa3.62□□□□□ -1.83
LRRC9-201ENST00000254271 A0A1W2PP64 1363 aa3.61□□□□□ -1.83
LRRC9-201ENST00000254271 PLSCR1O15162 318 aa3.61□□□□□ -1.83
LRRC9-201ENST00000254271 ZNF827Q17R98 1081 aa3.61□□□□□ -1.83
LRRC9-201ENST00000254271 HEG1Q9ULI3 1381 aa3.61□□□□□ -1.83
LRRC9-201ENST00000254271 PPIP5K1Q6PFW1 1433 aa3.6□□□□□ -1.83
LRRC9-201ENST00000254271 ZNF236Q9UL36 1845 aa3.6□□□□□ -1.83
LRRC9-201ENST00000254271 MGAMO43451 1857 aa3.6□□□□□ -1.83
LRRC9-201ENST00000254271 CABLES1Q8TDN4 633 aa3.6□□□□□ -1.83
LRRC9-201ENST00000254271 LRRC59Q96AG4 307 aaKnown RBP3.6□□□□□ -1.83
LRRC9-201ENST00000254271 PROSER2Q86WR7 435 aaPredicted RBP3.6□□□□□ -1.83
LRRC9-201ENST00000254271 CARD14Q9BXL6 1004 aa3.6□□□□□ -1.83
LRRC9-201ENST00000254271 QTRT2Q9H974 415 aaKnown RBP3.6□□□□□ -1.83
LRRC9-201ENST00000254271 ARHGEF10O15013 1369 aa3.6□□□□□ -1.83
LRRC9-201ENST00000254271 TSPY4P0CV99 314 aa3.6□□□□□ -1.83
LRRC9-201ENST00000254271 TSPY10P0CW01 314 aa3.6□□□□□ -1.83
LRRC9-201ENST00000254271 POTECB2RU33 542 aa3.59□□□□□ -1.83
LRRC9-201ENST00000254271 ZNF772Q68DY9 489 aaPredicted RBP3.59□□□□□ -1.83
LRRC9-201ENST00000254271 KANK1Q14678 1352 aa3.59□□□□□ -1.83
LRRC9-201ENST00000254271 NINLQ9Y2I6 1382 aa3.59□□□□□ -1.83
LRRC9-201ENST00000254271 WASLO00401 505 aaPredicted RBP3.59□□□□□ -1.84
LRRC9-201ENST00000254271 RGL3Q3MIN7 710 aa3.59□□□□□ -1.84
LRRC9-201ENST00000254271 AMER1Q5JTC6 1135 aaPredicted RBP3.59□□□□□ -1.84
LRRC9-201ENST00000254271 LRP10Q7Z4F1 713 aa3.59□□□□□ -1.84
LRRC9-201ENST00000254271 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.58□□□□□ -1.84
LRRC9-201ENST00000254271 ZRANB1Q9UGI0 708 aa3.58□□□□□ -1.84
LRRC9-201ENST00000254271 DMXL2Q8TDJ6 3036 aa3.58□□□□□ -1.84
LRRC9-201ENST00000254271 FAM182BQ5T319 152 aa3.58□□□□□ -1.84
LRRC9-201ENST00000254271 PNPLA7Q6ZV29 1317 aa3.58□□□□□ -1.84
LRRC9-201ENST00000254271 NPHP3Q7Z494 1330 aa3.58□□□□□ -1.84
LRRC9-201ENST00000254271 PTPRSQ13332 1948 aa3.58□□□□□ -1.84
LRRC9-201ENST00000254271 EDC4Q6P2E9 1401 aaKnown RBP3.58□□□□□ -1.84
LRRC9-201ENST00000254271 VPS13CQ709C8 3753 aa3.58□□□□□ -1.84
LRRC9-201ENST00000254271 FOXO3O43524 673 aa3.58□□□□□ -1.84
LRRC9-201ENST00000254271 C11orf95C9JLR9 678 aaPredicted RBP3.57□□□□□ -1.84
LRRC9-201ENST00000254271 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP3.57□□□□□ -1.84
LRRC9-201ENST00000254271 RXRBP28702 533 aa3.57□□□□□ -1.84
LRRC9-201ENST00000254271 EZH2Q15910 746 aaKnown RBP3.57□□□□□ -1.84
LRRC9-201ENST00000254271 HNRNPUL2Q1KMD3 747 aaKnown RBP3.57□□□□□ -1.84
LRRC9-201ENST00000254271 LARP1Q6PKG0 1096 aaKnown RBP3.57□□□□□ -1.84
LRRC9-201ENST00000254271 CCDC125Q86Z20 511 aa3.57□□□□□ -1.84
LRRC9-201ENST00000254271 NBPF19A0A087WUL8 3843 aa3.57□□□□□ -1.84
LRRC9-201ENST00000254271 LCTP09848 1927 aa3.57□□□□□ -1.84
LRRC9-201ENST00000254271 LTBP2Q14767 1821 aa3.57□□□□□ -1.84
LRRC9-201ENST00000254271 SEPT12Q8IYM1 358 aa3.57□□□□□ -1.84
LRRC9-201ENST00000254271 SP7Q8TDD2 431 aaPredicted RBP3.57□□□□□ -1.84
LRRC9-201ENST00000254271 YBX3P16989 372 aaKnown RBP eCLIP3.56□□□□□ -1.84
LRRC9-201ENST00000254271 NKX1-1Q15270 411 aaPredicted RBP3.56□□□□□ -1.84
LRRC9-201ENST00000254271 SLC51AQ86UW1 340 aa3.56□□□□□ -1.84
LRRC9-201ENST00000254271 ITPR1Q14643 2758 aa3.56□□□□□ -1.84
LRRC9-201ENST00000254271 USP47Q96K76 1375 aa3.56□□□□□ -1.84
LRRC9-201ENST00000254271 CCDC7Q96M83 1385 aa3.56□□□□□ -1.84
LRRC9-201ENST00000254271 ACEP12821 1306 aa3.56□□□□□ -1.84
LRRC9-201ENST00000254271 PER1O15534 1290 aaPredicted RBP3.56□□□□□ -1.84
LRRC9-201ENST00000254271 TRPC5Q9UL62 973 aaPredicted RBP3.56□□□□□ -1.84
LRRC9-201ENST00000254271 WDR17Q8IZU2 1322 aa3.56□□□□□ -1.84
LRRC9-201ENST00000254271 PRAM1Q96QH2 718 aa3.56□□□□□ -1.84
LRRC9-201ENST00000254271 USP21Q9UK80 565 aa3.56□□□□□ -1.84
LRRC9-201ENST00000254271 AKAP11Q9UKA4 1901 aa3.55□□□□□ -1.84
LRRC9-201ENST00000254271 KCNQ2O43526 872 aa3.55□□□□□ -1.84
LRRC9-201ENST00000254271 CNKSR2Q8WXI2 1034 aa3.55□□□□□ -1.84
LRRC9-201ENST00000254271 DOCK2Q92608 1830 aa3.55□□□□□ -1.84
LRRC9-201ENST00000254271 AK9Q5TCS8 1911 aa3.55□□□□□ -1.84
LRRC9-201ENST00000254271 BOD1L1Q8NFC6 3051 aa3.54□□□□□ -1.84
LRRC9-201ENST00000254271 PUS7Q96PZ0 661 aaKnown RBP3.54□□□□□ -1.84
LRRC9-201ENST00000254271 ANKRD36BQ8N2N9 1353 aa3.54□□□□□ -1.84
LRRC9-201ENST00000254271 XPCQ01831 940 aaPredicted RBP3.54□□□□□ -1.84
LRRC9-201ENST00000254271 APLP2Q06481 763 aa3.54□□□□□ -1.84
LRRC9-201ENST00000254271 KMT2BQ9UMN6 2715 aaPredicted RBP3.54□□□□□ -1.84
LRRC9-201ENST00000254271 GREB1LQ9C091 1923 aaPredicted RBP3.54□□□□□ -1.84
LRRC9-201ENST00000254271 BDP1A6H8Y1 2624 aa3.54□□□□□ -1.84
LRRC9-201ENST00000254271 MAST2Q6P0Q8 1798 aa3.54□□□□□ -1.84
LRRC9-201ENST00000254271 HOXD11P31277 338 aaPredicted RBP3.54□□□□□ -1.84
LRRC9-201ENST00000254271 KAT6BQ8WYB5 2073 aa3.54□□□□□ -1.84
LRRC9-201ENST00000254271 PHF8Q9UPP1 1060 aa3.53□□□□□ -1.84
LRRC9-201ENST00000254271 COL4A6Q14031 1691 aa3.53□□□□□ -1.84
LRRC9-201ENST00000254271 KRT28Q7Z3Y7 464 aa3.53□□□□□ -1.84
LRRC9-201ENST00000254271 CEMIPQ8WUJ3 1361 aa3.53□□□□□ -1.84
LRRC9-201ENST00000254271 ATAD5Q96QE3 1844 aa3.53□□□□□ -1.84
LRRC9-201ENST00000254271 ZNF609O15014 1411 aa3.53□□□□□ -1.84
LRRC9-201ENST00000254271 KIF3CO14782 793 aa3.53□□□□□ -1.84
LRRC9-201ENST00000254271 SLC24A1O60721 1099 aa3.53□□□□□ -1.84
LRRC9-201ENST00000254271 C8orf37Q96NL8 207 aa3.53□□□□□ -1.84
LRRC9-201ENST00000254271 A0A0G2JMZ2 1700 aa3.52□□□□□ -1.85
LRRC9-201ENST00000254271 CARMIL3Q8ND23 1372 aa3.52□□□□□ -1.85
LRRC9-201ENST00000254271 LRRC37A2A6NM11 1700 aa3.52□□□□□ -1.85
LRRC9-201ENST00000254271 GBF1Q92538 1859 aa3.52□□□□□ -1.85
LRRC9-201ENST00000254271 RTL1A6NKG5 1358 aa3.52□□□□□ -1.85
LRRC9-201ENST00000254271 VGFO15240 615 aaPredicted RBP3.52□□□□□ -1.85
LRRC9-201ENST00000254271 EID1Q9Y6B2 187 aa3.52□□□□□ -1.85
LRRC9-201ENST00000254271 KIF24Q5T7B8 1368 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms