RNA–Protein interactions for RNA: ENST00000249289.4

ATP6V1F-201, Transcript of ATPase H+ transporting V1 subunit F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP6V1F, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1F-201ENST00000249289 EXOC5O00471 708 aa20.27■□□□□ 0.84
ATP6V1F-201ENST00000249289 PDE3BQ13370 1112 aa20.27■□□□□ 0.84
ATP6V1F-201ENST00000249289 KRT27Q7Z3Y8 459 aa20.27■□□□□ 0.84
ATP6V1F-201ENST00000249289 HMOX1P09601 288 aa20.26■□□□□ 0.83
ATP6V1F-201ENST00000249289 U2AF1L5P0DN76 240 aaPredicted RBP20.26■□□□□ 0.83
ATP6V1F-201ENST00000249289 U2AF1Q01081 240 aaKnown RBP eCLIP20.26■□□□□ 0.83
ATP6V1F-201ENST00000249289 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.25■□□□□ 0.83
ATP6V1F-201ENST00000249289 ILDR2Q71H61 639 aa20.24■□□□□ 0.83
ATP6V1F-201ENST00000249289 ZCRB1Q8TBF4 217 aaKnown RBP20.24■□□□□ 0.83
ATP6V1F-201ENST00000249289 PCDH11XQ9BZA7 1347 aa20.24■□□□□ 0.83
ATP6V1F-201ENST00000249289 PCDH11YQ9BZA8 1340 aa20.24■□□□□ 0.83
ATP6V1F-201ENST00000249289 MRS2Q9HD23 443 aa20.23■□□□□ 0.83
ATP6V1F-201ENST00000249289 SPG7Q9UQ90 795 aa20.23■□□□□ 0.83
ATP6V1F-201ENST00000249289 FCHSD2O94868 740 aa20.22■□□□□ 0.83
ATP6V1F-201ENST00000249289 WDR43Q15061 677 aaKnown RBP eCLIP20.22■□□□□ 0.83
ATP6V1F-201ENST00000249289 RSPH6AQ9H0K4 717 aa20.22■□□□□ 0.83
ATP6V1F-201ENST00000249289 AMOTQ4VCS5 1084 aa20.21■□□□□ 0.83
ATP6V1F-201ENST00000249289 PLEKHO1Q53GL0 409 aaPredicted RBP20.21■□□□□ 0.83
ATP6V1F-201ENST00000249289 BCL9O00512 1426 aa20.2■□□□□ 0.82
ATP6V1F-201ENST00000249289 PRKAR2BP31323 418 aa20.2■□□□□ 0.82
ATP6V1F-201ENST00000249289 CCDC184Q52MB2 194 aa20.2■□□□□ 0.82
ATP6V1F-201ENST00000249289 MARCH10Q8NA82 808 aaPredicted RBP20.2■□□□□ 0.82
ATP6V1F-201ENST00000249289 DDX54Q8TDD1 881 aaKnown RBP20.18■□□□□ 0.82
ATP6V1F-201ENST00000249289 PNNQ9H307 717 aaKnown RBP20.18■□□□□ 0.82
ATP6V1F-201ENST00000249289 FAM196AQ6ZSG2 479 aa20.17■□□□□ 0.82
ATP6V1F-201ENST00000249289 CCER2I3L3R5 266 aa20.16■□□□□ 0.82
ATP6V1F-201ENST00000249289 CYP27B1O15528 508 aa20.16■□□□□ 0.82
ATP6V1F-201ENST00000249289 NEFMP07197 916 aa20.16■□□□□ 0.82
ATP6V1F-201ENST00000249289 FAM182BQ5T319 152 aa20.15■□□□□ 0.82
ATP6V1F-201ENST00000249289 ZNF530Q6P9A1 599 aaPredicted RBP20.15■□□□□ 0.82
ATP6V1F-201ENST00000249289 IFNL2Q8IZJ0 200 aa20.15■□□□□ 0.82
ATP6V1F-201ENST00000249289 DOT1LQ8TEK3 1739 aa20.14■□□□□ 0.81
ATP6V1F-201ENST00000249289 PHKG2P15735 406 aa20.14■□□□□ 0.81
ATP6V1F-201ENST00000249289 GAS2L2Q8NHY3 880 aa20.14■□□□□ 0.81
ATP6V1F-201ENST00000249289 SBF2Q86WG5 1849 aa20.13■□□□□ 0.81
ATP6V1F-201ENST00000249289 MAPK8IP3Q9UPT6 1336 aa20.13■□□□□ 0.81
ATP6V1F-201ENST00000249289 C1orf141Q5JVX7 400 aa20.13■□□□□ 0.81
ATP6V1F-201ENST00000249289 PNISRQ8TF01 805 aaKnown RBP20.13■□□□□ 0.81
ATP6V1F-201ENST00000249289 ADAMTS8Q9UP79 889 aa20.13■□□□□ 0.81
ATP6V1F-201ENST00000249289 NHSQ6T4R5 1651 aa20.13■□□□□ 0.81
ATP6V1F-201ENST00000249289 HSP90AB1P08238 724 aaKnown RBP20.12■□□□□ 0.81
ATP6V1F-201ENST00000249289 NKX1-1Q15270 411 aaPredicted RBP20.12■□□□□ 0.81
ATP6V1F-201ENST00000249289 MTHFSDQ2M296 383 aaKnown RBP20.12■□□□□ 0.81
ATP6V1F-201ENST00000249289 PHACTR3Q96KR7 559 aa20.12■□□□□ 0.81
ATP6V1F-201ENST00000249289 PLEKHF1Q96S99 279 aa20.12■□□□□ 0.81
ATP6V1F-201ENST00000249289 TOGARAM1Q9Y4F4 1720 aa20.11■□□□□ 0.81
ATP6V1F-201ENST00000249289 MIER1Q8N108 512 aa20.11■□□□□ 0.81
ATP6V1F-201ENST00000249289 AKAP4Q5JQC9 854 aa20.1■□□□□ 0.81
ATP6V1F-201ENST00000249289 MAP3K5Q99683 1374 aa20.09■□□□□ 0.81
ATP6V1F-201ENST00000249289 RUNDC1Q96C34 613 aa20.09■□□□□ 0.81
ATP6V1F-201ENST00000249289 TNS1Q9HBL0 1735 aaKnown RBP20.09■□□□□ 0.81
ATP6V1F-201ENST00000249289 ADAMTS7Q9UKP4 1686 aa20.09■□□□□ 0.81
ATP6V1F-201ENST00000249289 DCAF5Q96JK2 942 aa20.08■□□□□ 0.81
ATP6V1F-201ENST00000249289 KDM6AO15550 1401 aaPredicted RBP20.08■□□□□ 0.8
ATP6V1F-201ENST00000249289 SCN11AQ9UI33 1791 aa20.08■□□□□ 0.8
ATP6V1F-201ENST00000249289 CCDC146Q8IYE0 955 aa20.06■□□□□ 0.8
ATP6V1F-201ENST00000249289 VIRMAQ69YN4 1812 aaKnown RBP20.06■□□□□ 0.8
ATP6V1F-201ENST00000249289 DLG5Q8TDM6 1919 aa20.06■□□□□ 0.8
ATP6V1F-201ENST00000249289 GNAT3A8MTJ3 354 aa20.05■□□□□ 0.8
ATP6V1F-201ENST00000249289 TRIM37O94972 964 aa20.05■□□□□ 0.8
ATP6V1F-201ENST00000249289 NFE2L2Q16236 605 aa20.05■□□□□ 0.8
ATP6V1F-201ENST00000249289 CCDC125Q86Z20 511 aa20.05■□□□□ 0.8
ATP6V1F-201ENST00000249289 BCL11BQ9C0K0 894 aaPredicted RBP20.05■□□□□ 0.8
ATP6V1F-201ENST00000249289 MRC1P22897 1456 aa20.05■□□□□ 0.8
ATP6V1F-201ENST00000249289 ITGB4P16144 1822 aa20.04■□□□□ 0.8
ATP6V1F-201ENST00000249289 MPRIPQ6WCQ1 1025 aa20.04■□□□□ 0.8
ATP6V1F-201ENST00000249289 ACSBG1Q96GR2 724 aa20.04■□□□□ 0.8
ATP6V1F-201ENST00000249289 KAT6BQ8WYB5 2073 aa20.03■□□□□ 0.8
ATP6V1F-201ENST00000249289 FAM9BQ8IZU0 186 aa20.03■□□□□ 0.8
ATP6V1F-201ENST00000249289 UPF1Q92900 1129 aaKnown RBP eCLIP20.03■□□□□ 0.8
ATP6V1F-201ENST00000249289 BTAF1O14981 1849 aa20.03■□□□□ 0.8
ATP6V1F-201ENST00000249289 ERVV-2B6SEH9 535 aa20.02■□□□□ 0.8
ATP6V1F-201ENST00000249289 HTATSF1O43719 755 aaKnown RBP20.02■□□□□ 0.8
ATP6V1F-201ENST00000249289 PRIM1P49642 420 aaKnown RBP20.02■□□□□ 0.8
ATP6V1F-201ENST00000249289 SF3B2Q13435 895 aaKnown RBP20.02■□□□□ 0.8
ATP6V1F-201ENST00000249289 SYTL4Q96C24 671 aaPredicted RBP20.02■□□□□ 0.8
ATP6V1F-201ENST00000249289 EP400Q96L91 3159 aa20.01■□□□□ 0.79
ATP6V1F-201ENST00000249289 RNMTO43148 476 aaKnown RBP20.01■□□□□ 0.79
ATP6V1F-201ENST00000249289 KCNQ2O43526 872 aa20.01■□□□□ 0.79
ATP6V1F-201ENST00000249289 TMPOP42166 694 aaKnown RBP20.01■□□□□ 0.79
ATP6V1F-201ENST00000249289 RTF1Q92541 710 aaKnown RBP20.01■□□□□ 0.79
ATP6V1F-201ENST00000249289 RGPD3A6NKT7 1758 aaPredicted RBP20■□□□□ 0.79
ATP6V1F-201ENST00000249289 RGPD4Q7Z3J3 1758 aa20■□□□□ 0.79
ATP6V1F-201ENST00000249289 CEMIPQ8WUJ3 1361 aa20■□□□□ 0.79
ATP6V1F-201ENST00000249289 TMOD3Q9NYL9 352 aa20■□□□□ 0.79
ATP6V1F-201ENST00000249289 LMOD3Q0VAK6 560 aa19.99■□□□□ 0.79
ATP6V1F-201ENST00000249289 SOCS7O14512 581 aa19.98■□□□□ 0.79
ATP6V1F-201ENST00000249289 APAF1O14727 1248 aa19.98■□□□□ 0.79
ATP6V1F-201ENST00000249289 RIPK4P57078 832 aa19.98■□□□□ 0.79
ATP6V1F-201ENST00000249289 CABP4P57796 275 aa19.98■□□□□ 0.79
ATP6V1F-201ENST00000249289 PTF1AQ7RTS3 328 aa19.98■□□□□ 0.79
ATP6V1F-201ENST00000249289 LGR6Q9HBX8 967 aa19.98■□□□□ 0.79
ATP6V1F-201ENST00000249289 SIPA1L3O60292 1781 aaPredicted RBP19.98■□□□□ 0.79
ATP6V1F-201ENST00000249289 BAG6P46379 1132 aa19.97■□□□□ 0.79
ATP6V1F-201ENST00000249289 IL17REQ8NFR9 667 aa19.97■□□□□ 0.79
ATP6V1F-201ENST00000249289 RRP7AQ9Y3A4 280 aaKnown RBP19.97■□□□□ 0.79
ATP6V1F-201ENST00000249289 APBA3O96018 575 aa19.96■□□□□ 0.79
ATP6V1F-201ENST00000249289 TEFQ10587 303 aa19.96■□□□□ 0.79
ATP6V1F-201ENST00000249289 PIGBQ92521 554 aa19.96■□□□□ 0.79
ATP6V1F-201ENST00000249289 SLC52A2Q9HAB3 445 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms