RNA–Protein interactions for RNA: ENST00000243662.10

RAB38-201, Transcript of RAB38, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB38, Length 1,465 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38-201ENST00000243662 RAPGEF4Q8WZA2 1011 aa20.88■□□□□ 0.93
RAB38-201ENST00000243662 SBF2Q86WG5 1849 aa20.88■□□□□ 0.93
RAB38-201ENST00000243662 EXOC5O00471 708 aa20.88■□□□□ 0.93
RAB38-201ENST00000243662 AEBP1Q8IUX7 1158 aa20.88■□□□□ 0.93
RAB38-201ENST00000243662 TATP17735 454 aaPredicted RBP20.87■□□□□ 0.93
RAB38-201ENST00000243662 PDE3BQ13370 1112 aa20.86■□□□□ 0.93
RAB38-201ENST00000243662 SULT6B1Q6IMI4 303 aa20.86■□□□□ 0.93
RAB38-201ENST00000243662 MARCH10Q8NA82 808 aaPredicted RBP20.85■□□□□ 0.93
RAB38-201ENST00000243662 BCL9O00512 1426 aa20.84■□□□□ 0.93
RAB38-201ENST00000243662 ANP32CO43423 234 aa20.84■□□□□ 0.93
RAB38-201ENST00000243662 FAM182BQ5T319 152 aa20.84■□□□□ 0.93
RAB38-201ENST00000243662 ZCRB1Q8TBF4 217 aaKnown RBP20.84■□□□□ 0.93
RAB38-201ENST00000243662 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.83■□□□□ 0.93
RAB38-201ENST00000243662 HMOX1P09601 288 aa20.82■□□□□ 0.92
RAB38-201ENST00000243662 NUDCQ9Y266 331 aa20.82■□□□□ 0.92
RAB38-201ENST00000243662 CCER2I3L3R5 266 aa20.81■□□□□ 0.92
RAB38-201ENST00000243662 U2SURPO15042 1029 aaKnown RBP20.81■□□□□ 0.92
RAB38-201ENST00000243662 FAM196AQ6ZSG2 479 aa20.8■□□□□ 0.92
RAB38-201ENST00000243662 TNS1Q9HBL0 1735 aaKnown RBP20.8■□□□□ 0.92
RAB38-201ENST00000243662 PCDH11XQ9BZA7 1347 aa20.79■□□□□ 0.92
RAB38-201ENST00000243662 PCDH11YQ9BZA8 1340 aa20.79■□□□□ 0.92
RAB38-201ENST00000243662 DOT1LQ8TEK3 1739 aa20.78■□□□□ 0.92
RAB38-201ENST00000243662 CYP27B1O15528 508 aa20.78■□□□□ 0.92
RAB38-201ENST00000243662 RSPH6AQ9H0K4 717 aa20.78■□□□□ 0.92
RAB38-201ENST00000243662 SPG7Q9UQ90 795 aa20.78■□□□□ 0.92
RAB38-201ENST00000243662 NHSQ6T4R5 1651 aa20.78■□□□□ 0.92
RAB38-201ENST00000243662 VIRMAQ69YN4 1812 aaKnown RBP20.77■□□□□ 0.92
RAB38-201ENST00000243662 KAT6BQ8WYB5 2073 aa20.77■□□□□ 0.92
RAB38-201ENST00000243662 SOCS7O14512 581 aa20.77■□□□□ 0.92
RAB38-201ENST00000243662 U2AF1L5P0DN76 240 aaPredicted RBP20.77■□□□□ 0.92
RAB38-201ENST00000243662 U2AF1Q01081 240 aaKnown RBP eCLIP20.77■□□□□ 0.92
RAB38-201ENST00000243662 DDX54Q8TDD1 881 aaKnown RBP20.77■□□□□ 0.92
RAB38-201ENST00000243662 UPF1Q92900 1129 aaKnown RBP eCLIP20.77■□□□□ 0.92
RAB38-201ENST00000243662 TOGARAM1Q9Y4F4 1720 aa20.77■□□□□ 0.92
RAB38-201ENST00000243662 CCDC184Q52MB2 194 aa20.76■□□□□ 0.91
RAB38-201ENST00000243662 FCHSD2O94868 740 aa20.75■□□□□ 0.91
RAB38-201ENST00000243662 AMOTQ4VCS5 1084 aa20.75■□□□□ 0.91
RAB38-201ENST00000243662 PLEKHO1Q53GL0 409 aaPredicted RBP20.75■□□□□ 0.91
RAB38-201ENST00000243662 ITGB4P16144 1822 aa20.74■□□□□ 0.91
RAB38-201ENST00000243662 NKX1-1Q15270 411 aaPredicted RBP20.74■□□□□ 0.91
RAB38-201ENST00000243662 PHKG2P15735 406 aa20.73■□□□□ 0.91
RAB38-201ENST00000243662 PRKAR2BP31323 418 aa20.73■□□□□ 0.91
RAB38-201ENST00000243662 SCN11AQ9UI33 1791 aa20.73■□□□□ 0.91
RAB38-201ENST00000243662 IFNL2Q8IZJ0 200 aa20.72■□□□□ 0.91
RAB38-201ENST00000243662 ADAMTS7Q9UKP4 1686 aa20.72■□□□□ 0.91
RAB38-201ENST00000243662 BTAF1O14981 1849 aa20.71■□□□□ 0.91
RAB38-201ENST00000243662 CCDC125Q86Z20 511 aa20.71■□□□□ 0.91
RAB38-201ENST00000243662 DLG5Q8TDM6 1919 aa20.71■□□□□ 0.91
RAB38-201ENST00000243662 TRIM37O94972 964 aa20.7■□□□□ 0.9
RAB38-201ENST00000243662 MTHFSDQ2M296 383 aaKnown RBP20.7■□□□□ 0.9
RAB38-201ENST00000243662 ZNF530Q6P9A1 599 aaPredicted RBP20.7■□□□□ 0.9
RAB38-201ENST00000243662 PHACTR3Q96KR7 559 aa20.7■□□□□ 0.9
RAB38-201ENST00000243662 PLEKHF1Q96S99 279 aa20.7■□□□□ 0.9
RAB38-201ENST00000243662 PTF1AQ7RTS3 328 aa20.69■□□□□ 0.9
RAB38-201ENST00000243662 RGPD3A6NKT7 1758 aaPredicted RBP20.68■□□□□ 0.9
RAB38-201ENST00000243662 RGPD4Q7Z3J3 1758 aa20.68■□□□□ 0.9
RAB38-201ENST00000243662 KDM6AO15550 1401 aaPredicted RBP20.68■□□□□ 0.9
RAB38-201ENST00000243662 KCNQ2O43526 872 aa20.68■□□□□ 0.9
RAB38-201ENST00000243662 BCL11BQ9C0K0 894 aaPredicted RBP20.68■□□□□ 0.9
RAB38-201ENST00000243662 AKAP4Q5JQC9 854 aa20.67■□□□□ 0.9
RAB38-201ENST00000243662 ACSBG1Q96GR2 724 aa20.67■□□□□ 0.9
RAB38-201ENST00000243662 ADAMTS8Q9UP79 889 aa20.67■□□□□ 0.9
RAB38-201ENST00000243662 WDR43Q15061 677 aaKnown RBP eCLIP20.66■□□□□ 0.9
RAB38-201ENST00000243662 MRS2Q9HD23 443 aa20.66■□□□□ 0.9
RAB38-201ENST00000243662 HSP90AB1P08238 724 aaKnown RBP20.65■□□□□ 0.9
RAB38-201ENST00000243662 C1orf141Q5JVX7 400 aa20.65■□□□□ 0.9
RAB38-201ENST00000243662 GAS2L2Q8NHY3 880 aa20.65■□□□□ 0.9
RAB38-201ENST00000243662 PNISRQ8TF01 805 aaKnown RBP20.65■□□□□ 0.9
RAB38-201ENST00000243662 PRIM1P49642 420 aaKnown RBP20.64■□□□□ 0.89
RAB38-201ENST00000243662 DCAF5Q96JK2 942 aa20.64■□□□□ 0.89
RAB38-201ENST00000243662 PNNQ9H307 717 aaKnown RBP20.64■□□□□ 0.89
RAB38-201ENST00000243662 MAP3K5Q99683 1374 aa20.62■□□□□ 0.89
RAB38-201ENST00000243662 MRC1P22897 1456 aa20.62■□□□□ 0.89
RAB38-201ENST00000243662 SIPA1L3O60292 1781 aaPredicted RBP20.62■□□□□ 0.89
RAB38-201ENST00000243662 SF3B2Q13435 895 aaKnown RBP20.62■□□□□ 0.89
RAB38-201ENST00000243662 PELP1Q8IZL8 1130 aaKnown RBP20.62■□□□□ 0.89
RAB38-201ENST00000243662 RREB1Q92766 1687 aa20.61■□□□□ 0.89
RAB38-201ENST00000243662 LY75O60449 1722 aa20.61■□□□□ 0.89
RAB38-201ENST00000243662 MPRIPQ6WCQ1 1025 aa20.61■□□□□ 0.89
RAB38-201ENST00000243662 ERVV-2B6SEH9 535 aa20.6■□□□□ 0.89
RAB38-201ENST00000243662 APBA3O96018 575 aa20.6■□□□□ 0.89
RAB38-201ENST00000243662 DEFB132Q7Z7B7 95 aa20.6■□□□□ 0.89
RAB38-201ENST00000243662 GNAT3A8MTJ3 354 aa20.59■□□□□ 0.89
RAB38-201ENST00000243662 PLSCR1O15162 318 aa20.59■□□□□ 0.89
RAB38-201ENST00000243662 BAG6P46379 1132 aa20.59■□□□□ 0.89
RAB38-201ENST00000243662 SYTL4Q96C24 671 aaPredicted RBP20.59■□□□□ 0.89
RAB38-201ENST00000243662 LGR6Q9HBX8 967 aa20.59■□□□□ 0.89
RAB38-201ENST00000243662 MAPK8IP3Q9UPT6 1336 aa20.59■□□□□ 0.89
RAB38-201ENST00000243662 RNMTO43148 476 aaKnown RBP20.58■□□□□ 0.89
RAB38-201ENST00000243662 NEFMP07197 916 aa20.58■□□□□ 0.89
RAB38-201ENST00000243662 RUNDC1Q96C34 613 aa20.58■□□□□ 0.89
RAB38-201ENST00000243662 CEMIPQ8WUJ3 1361 aa20.58■□□□□ 0.88
RAB38-201ENST00000243662 NFE2L2Q16236 605 aa20.57■□□□□ 0.88
RAB38-201ENST00000243662 CCDC146Q8IYE0 955 aa20.57■□□□□ 0.88
RAB38-201ENST00000243662 IL17REQ8NFR9 667 aa20.57■□□□□ 0.88
RAB38-201ENST00000243662 PIGBQ92521 554 aa20.57■□□□□ 0.88
RAB38-201ENST00000243662 CAMKK2Q96RR4 588 aa20.57■□□□□ 0.88
RAB38-201ENST00000243662 EN1Q05925 392 aaPredicted RBP20.56■□□□□ 0.88
RAB38-201ENST00000243662 PAPPAQ13219 1627 aa20.56■□□□□ 0.88
RAB38-201ENST00000243662 NUP188Q5SRE5 1749 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms