RNA–Protein interactions for RNA: ENST00000241312.8

CSMD2-201, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best)

Gene CSMD2, Length 13,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-201ENST00000241312 PPP2R1AP30153 589 aa7.9□□□□□ -1.14
CSMD2-201ENST00000241312 ATF3P18847 181 aa7.9□□□□□ -1.14
CSMD2-201ENST00000241312 ZSCAN25Q6NSZ9 544 aa7.9□□□□□ -1.14
CSMD2-201ENST00000241312 SCAND2PQ9GZW5 306 aaPredicted RBP7.9□□□□□ -1.14
CSMD2-201ENST00000241312 MAP4K4O95819 1239 aaPredicted RBP7.9□□□□□ -1.14
CSMD2-201ENST00000241312 FAM177A1Q8N128 213 aaPredicted RBP7.9□□□□□ -1.14
CSMD2-201ENST00000241312 NOB1Q9ULX3 412 aaKnown RBP7.9□□□□□ -1.14
CSMD2-201ENST00000241312 PLEKHO1Q53GL0 409 aaPredicted RBP7.9□□□□□ -1.15
CSMD2-201ENST00000241312 LUZP1Q86V48 1076 aa7.9□□□□□ -1.15
CSMD2-201ENST00000241312 HDGFL1Q5TGJ6 251 aa7.9□□□□□ -1.15
CSMD2-201ENST00000241312 BLOC1S2Q6QNY1 142 aa7.9□□□□□ -1.15
CSMD2-201ENST00000241312 PHAXQ9H814 394 aaKnown RBP7.9□□□□□ -1.15
CSMD2-201ENST00000241312 GOLGA6L10A0A0M3HER8 536 aa7.89□□□□□ -1.15
CSMD2-201ENST00000241312 SYCE3A1L190 88 aa7.89□□□□□ -1.15
CSMD2-201ENST00000241312 C9orf84Q5VXU9 1444 aa7.89□□□□□ -1.15
CSMD2-201ENST00000241312 CETN2P41208 172 aa7.89□□□□□ -1.15
CSMD2-201ENST00000241312 PDRG1Q9NUG6 133 aa7.89□□□□□ -1.15
CSMD2-201ENST00000241312 KIF5CO60282 957 aa7.89□□□□□ -1.15
CSMD2-201ENST00000241312 MCM4P33991 863 aa7.89□□□□□ -1.15
CSMD2-201ENST00000241312 AACSQ86V21 672 aa7.89□□□□□ -1.15
CSMD2-201ENST00000241312 WDR63Q8IWG1 891 aa7.89□□□□□ -1.15
CSMD2-201ENST00000241312 CABP2Q9NPB3 220 aa7.89□□□□□ -1.15
CSMD2-201ENST00000241312 SH2B1Q9NRF2 756 aaPredicted RBP7.89□□□□□ -1.15
CSMD2-201ENST00000241312 MICALCLQ6ZW33 695 aa7.89□□□□□ -1.15
CSMD2-201ENST00000241312 CASTP20810 708 aaKnown RBP7.89□□□□□ -1.15
CSMD2-201ENST00000241312 STK3Q13188 491 aa7.89□□□□□ -1.15
CSMD2-201ENST00000241312 CFAP100Q494V2 611 aa7.89□□□□□ -1.15
CSMD2-201ENST00000241312 CALCOCO1Q9P1Z2 691 aa7.89□□□□□ -1.15
CSMD2-201ENST00000241312 SMC1AQ14683 1233 aaKnown RBP7.89□□□□□ -1.15
CSMD2-201ENST00000241312 SOGA3Q5TF21 947 aa7.89□□□□□ -1.15
CSMD2-201ENST00000241312 CHD1LQ86WJ1 897 aa7.89□□□□□ -1.15
CSMD2-201ENST00000241312 CGNQ9P2M7 1197 aaKnown RBP7.89□□□□□ -1.15
CSMD2-201ENST00000241312 CCDC183Q5T5S1 534 aa7.89□□□□□ -1.15
CSMD2-201ENST00000241312 PNISRQ8TF01 805 aaKnown RBP7.88□□□□□ -1.15
CSMD2-201ENST00000241312 MCM5P33992 734 aa7.88□□□□□ -1.15
CSMD2-201ENST00000241312 ATF7IPQ6VMQ6 1270 aa7.88□□□□□ -1.15
CSMD2-201ENST00000241312 ALS2CR12Q96Q35 445 aa7.88□□□□□ -1.15
CSMD2-201ENST00000241312 NEMFO60524 1076 aa7.88□□□□□ -1.15
CSMD2-201ENST00000241312 PTPN14Q15678 1187 aa7.88□□□□□ -1.15
CSMD2-201ENST00000241312 CNNM1Q9NRU3 951 aa7.88□□□□□ -1.15
CSMD2-201ENST00000241312 GGNBP2Q9H3C7 697 aa7.88□□□□□ -1.15
CSMD2-201ENST00000241312 ZHX3Q9H4I2 956 aa7.88□□□□□ -1.15
CSMD2-201ENST00000241312 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.88□□□□□ -1.15
CSMD2-201ENST00000241312 CAVIN2O95810 425 aa7.88□□□□□ -1.15
CSMD2-201ENST00000241312 FILIP1Q7Z7B0 1213 aa7.88□□□□□ -1.15
CSMD2-201ENST00000241312 SKAP1Q86WV1 359 aa7.88□□□□□ -1.15
CSMD2-201ENST00000241312 TSR2Q969E8 191 aaKnown RBP7.88□□□□□ -1.15
CSMD2-201ENST00000241312 FEZ1Q99689 392 aa7.88□□□□□ -1.15
CSMD2-201ENST00000241312 U3KPZ7 1027 aaPredicted RBP7.88□□□□□ -1.15
CSMD2-201ENST00000241312 JAKMIP1Q96N16 626 aaKnown RBP7.88□□□□□ -1.15
CSMD2-201ENST00000241312 ATAD2BQ9ULI0 1458 aa7.87□□□□□ -1.15
CSMD2-201ENST00000241312 NLRP6P59044 892 aa7.87□□□□□ -1.15
CSMD2-201ENST00000241312 NUP133Q8WUM0 1156 aa7.87□□□□□ -1.15
CSMD2-201ENST00000241312 STAMBPO95630 424 aa7.87□□□□□ -1.15
CSMD2-201ENST00000241312 DNAI2Q9GZS0 605 aa7.87□□□□□ -1.15
CSMD2-201ENST00000241312 ERBINQ96RT1 1412 aa7.87□□□□□ -1.15
CSMD2-201ENST00000241312 SLC4A2P04920 1241 aa7.87□□□□□ -1.15
CSMD2-201ENST00000241312 C11orf95C9JLR9 678 aaPredicted RBP7.87□□□□□ -1.15
CSMD2-201ENST00000241312 MPHOSPH8Q99549 860 aa7.87□□□□□ -1.15
CSMD2-201ENST00000241312 BCAR3O75815 825 aa7.87□□□□□ -1.15
CSMD2-201ENST00000241312 NF2P35240 595 aa7.87□□□□□ -1.15
CSMD2-201ENST00000241312 DAPK1P53355 1430 aa7.87□□□□□ -1.15
CSMD2-201ENST00000241312 WDR97A6NE52 1622 aa7.87□□□□□ -1.15
CSMD2-201ENST00000241312 TIAM1Q13009 1591 aa7.87□□□□□ -1.15
CSMD2-201ENST00000241312 CCDC141Q6ZP82 1450 aa7.87□□□□□ -1.15
CSMD2-201ENST00000241312 EXOSC9Q06265 439 aaKnown RBP7.87□□□□□ -1.15
CSMD2-201ENST00000241312 SEC63Q9UGP8 760 aaKnown RBP7.87□□□□□ -1.15
CSMD2-201ENST00000241312 CTAGE5O15320 804 aa7.87□□□□□ -1.15
CSMD2-201ENST00000241312 GCOM1H8Y6P7 765 aaPredicted RBP7.87□□□□□ -1.15
CSMD2-201ENST00000241312 MYZAPP0CAP1 466 aa7.87□□□□□ -1.15
CSMD2-201ENST00000241312 SYNJ2O15056 1496 aa7.86□□□□□ -1.15
CSMD2-201ENST00000241312 ANKRD30BQ9BXX2 1392 aa7.86□□□□□ -1.15
CSMD2-201ENST00000241312 ATP2B2Q01814 1243 aa7.86□□□□□ -1.15
CSMD2-201ENST00000241312 FAM135AQ9P2D6 1515 aa7.86□□□□□ -1.15
CSMD2-201ENST00000241312 NEBLO76041 1014 aa7.86□□□□□ -1.15
CSMD2-201ENST00000241312 TDO2P48775 406 aa7.86□□□□□ -1.15
CSMD2-201ENST00000241312 CCDC83Q8IWF9 413 aa7.86□□□□□ -1.15
CSMD2-201ENST00000241312 FGFR1OPO95684 399 aaKnown RBP7.86□□□□□ -1.15
CSMD2-201ENST00000241312 IFFO1Q0D2I5 559 aa7.86□□□□□ -1.15
CSMD2-201ENST00000241312 ABTB2Q8N961 1025 aa7.86□□□□□ -1.15
CSMD2-201ENST00000241312 NKTRP30414 1462 aaKnown RBP7.86□□□□□ -1.15
CSMD2-201ENST00000241312 SSBP05455 408 aaKnown RBP eCLIP7.86□□□□□ -1.15
CSMD2-201ENST00000241312 CCDC175P0C221 793 aa7.86□□□□□ -1.15
CSMD2-201ENST00000241312 GSDMDP57764 484 aa7.86□□□□□ -1.15
CSMD2-201ENST00000241312 EHBP1Q8NDI1 1231 aa7.86□□□□□ -1.15
CSMD2-201ENST00000241312 SPATA24Q86W54 205 aa7.86□□□□□ -1.15
CSMD2-201ENST00000241312 KIAA1107Q9UPP5 1409 aa7.86□□□□□ -1.15
CSMD2-201ENST00000241312 CFTRP13569 1480 aa7.86□□□□□ -1.15
CSMD2-201ENST00000241312 MAP2K1Q02750 393 aaPredicted RBP7.86□□□□□ -1.15
CSMD2-201ENST00000241312 FKBP15Q5T1M5 1219 aa7.86□□□□□ -1.15
CSMD2-201ENST00000241312 BBXQ8WY36 941 aaPredicted RBP7.85□□□□□ -1.15
CSMD2-201ENST00000241312 SSR1P43307 286 aaKnown RBP7.85□□□□□ -1.15
CSMD2-201ENST00000241312 HOOK3Q86VS8 718 aa7.85□□□□□ -1.15
CSMD2-201ENST00000241312 SIL1Q9H173 461 aa7.85□□□□□ -1.15
CSMD2-201ENST00000241312 CLIP2Q9UDT6 1046 aa7.85□□□□□ -1.15
CSMD2-201ENST00000241312 CASQ1P31415 396 aa7.85□□□□□ -1.15
CSMD2-201ENST00000241312 ANO10Q9NW15 660 aa7.85□□□□□ -1.15
CSMD2-201ENST00000241312 ATAD2Q6PL18 1390 aa7.85□□□□□ -1.15
CSMD2-201ENST00000241312 GSTTP1A0A1W2PQM5 241 aa7.85□□□□□ -1.15
CSMD2-201ENST00000241312 GOLGA6L9A6NEM1 432 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms