RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 SERPINC1P01008 464 aa15.12■□□□□ 0.01
VAMP4-201ENST00000236192 ZMYM3Q14202 1370 aa15.12■□□□□ 0.01
VAMP4-201ENST00000236192 EBAG9O00559 213 aa15.12■□□□□ 0.01
VAMP4-201ENST00000236192 RNF187Q5TA31 235 aaPredicted RBP15.12■□□□□ 0.01
VAMP4-201ENST00000236192 CCDC172P0C7W6 258 aa15.11■□□□□ 0.01
VAMP4-201ENST00000236192 GIMAP6Q6P9H5 292 aa15.11■□□□□ 0.01
VAMP4-201ENST00000236192 NEK11Q8NG66 645 aa15.11■□□□□ 0.01
VAMP4-201ENST00000236192 FMNL2Q96PY5 1086 aa15.11■□□□□ 0.01
VAMP4-201ENST00000236192 USP48Q86UV5 1035 aa15.11■□□□□ 0.01
VAMP4-201ENST00000236192 PLEKHD1A6NEE1 506 aa15.11■□□□□ 0.01
VAMP4-201ENST00000236192 NEBLO76041 1014 aa15.11■□□□□ 0.01
VAMP4-201ENST00000236192 ZNF853P0CG23 659 aa15.11■□□□□ 0.01
VAMP4-201ENST00000236192 LUZP1Q86V48 1076 aa15.11■□□□□ 0.01
VAMP4-201ENST00000236192 CCDC150Q8NCX0 1101 aa15.11■□□□□ 0.01
VAMP4-201ENST00000236192 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.11■□□□□ 0.01
VAMP4-201ENST00000236192 CEP83Q9Y592 693 aa15.11■□□□□ 0.01
VAMP4-201ENST00000236192 SLC4A10Q6U841 1118 aa15.1■□□□□ 0.01
VAMP4-201ENST00000236192 RRP15Q9Y3B9 282 aaKnown RBP15.1■□□□□ 0.01
VAMP4-201ENST00000236192 HDAC1Q13547 482 aaPredicted RBP15.1■□□□□ 0.01
VAMP4-201ENST00000236192 DDX19AQ9NUU7 478 aaKnown RBP15.1■□□□□ 0.01
VAMP4-201ENST00000236192 GOLGA6L9A6NEM1 432 aa15.1■□□□□ 0.01
VAMP4-201ENST00000236192 HMGB1P09429 215 aaKnown RBP15.1■□□□□ 0.01
VAMP4-201ENST00000236192 NCAPGQ9BPX3 1015 aa15.1■□□□□ 0.01
VAMP4-201ENST00000236192 EXOSC9Q06265 439 aaKnown RBP15.09■□□□□ 0.01
VAMP4-201ENST00000236192 DDX41Q9UJV9 622 aaKnown RBP15.09■□□□□ 0.01
VAMP4-201ENST00000236192 PCDHB15Q9Y5E8 787 aa15.09■□□□□ 0.01
VAMP4-201ENST00000236192 GOLGA6L10A6NI86 522 aa15.09■□□□□ 0.01
VAMP4-201ENST00000236192 OAS2P29728 719 aaKnown RBP15.09■□□□□ 0.01
VAMP4-201ENST00000236192 POTEDQ86YR6 584 aa15.09■□□□□ 0.01
VAMP4-201ENST00000236192 NAIPQ13075 1403 aa15.09■□□□□ 0.01
VAMP4-201ENST00000236192 DNAJC21Q5F1R6 531 aaKnown RBP15.08■□□□□ 0.01
VAMP4-201ENST00000236192 AP1ARQ63HQ0 302 aa15.08■□□□□ 0.01
VAMP4-201ENST00000236192 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.08■□□□□ 0.01
VAMP4-201ENST00000236192 SMARCE1Q969G3 411 aa15.08■□□□□ 0.01
VAMP4-201ENST00000236192 CCDC196A0A1B0GTZ2 297 aa15.08■□□□□ 0
VAMP4-201ENST00000236192 SETSIPP0DME0 302 aa15.08■□□□□ 0
VAMP4-201ENST00000236192 ZNF165P49910 485 aa15.08■□□□□ 0
VAMP4-201ENST00000236192 ANO10Q9NW15 660 aa15.08■□□□□ 0
VAMP4-201ENST00000236192 LARP1BQ659C4 914 aaKnown RBP15.08■□□□□ 0
VAMP4-201ENST00000236192 C1orf115Q9H7X2 142 aa15.08■□□□□ 0
VAMP4-201ENST00000236192 ERLIN2O94905 339 aa15.08■□□□□ 0
VAMP4-201ENST00000236192 POLA1P09884 1462 aaPredicted RBP15.07■□□□□ 0
VAMP4-201ENST00000236192 MCM6Q14566 821 aa15.07■□□□□ 0
VAMP4-201ENST00000236192 RAD51AP2Q09MP3 1159 aa15.07■□□□□ 0
VAMP4-201ENST00000236192 IQCEQ6IPM2 695 aa15.07■□□□□ 0
VAMP4-201ENST00000236192 ZSCAN31Q96LW9 406 aaPredicted RBP15.07■□□□□ 0
VAMP4-201ENST00000236192 PSMA5P28066 241 aa15.07■□□□□ 0
VAMP4-201ENST00000236192 CKAP2LQ8IYA6 745 aa15.07■□□□□ 0
VAMP4-201ENST00000236192 RGS22Q8NE09 1264 aa15.07■□□□□ 0
VAMP4-201ENST00000236192 ELL2O00472 640 aaPredicted RBP15.06■□□□□ 0
VAMP4-201ENST00000236192 ZNF396Q96N95 335 aaPredicted RBP15.06■□□□□ 0
VAMP4-201ENST00000236192 RSRC1Q96IZ7 334 aaKnown RBP15.06■□□□□ 0
VAMP4-201ENST00000236192 SCAND2PQ9GZW5 306 aaPredicted RBP15.06■□□□□ 0
VAMP4-201ENST00000236192 SCAPERQ9BY12 1400 aa15.06■□□□□ 0
VAMP4-201ENST00000236192 ZRSR2Q15696 482 aaKnown RBP15.06■□□□□ 0
VAMP4-201ENST00000236192 RBM42Q9BTD8 480 aaKnown RBP15.06■□□□□ 0
VAMP4-201ENST00000236192 DNAI1Q9UI46 699 aa15.06■□□□□ 0
VAMP4-201ENST00000236192 EIF5P55010 431 aaKnown RBP15.06■□□□□ 0
VAMP4-201ENST00000236192 TMEM63CQ9P1W3 806 aa15.06■□□□□ 0
VAMP4-201ENST00000236192 CTAGE5O15320 804 aa15.05■□□□□ 0
VAMP4-201ENST00000236192 NUCB1Q02818 461 aa15.05■□□□□ 0
VAMP4-201ENST00000236192 SYT10Q6XYQ8 523 aa15.05■□□□□ 0
VAMP4-201ENST00000236192 CEP57Q86XR8 500 aa15.05■□□□□ 0
VAMP4-201ENST00000236192 MYO1CO00159 1063 aa15.05■□□□□ 0
VAMP4-201ENST00000236192 ANKRD18AQ8IVF6 992 aa15.05■□□□□ 0
VAMP4-201ENST00000236192 NAA25Q14CX7 972 aa15.05■□□□□ -0
VAMP4-201ENST00000236192 GOLGA1Q92805 767 aa15.05■□□□□ -0
VAMP4-201ENST00000236192 SLC20A2Q08357 652 aa15.05■□□□□ -0
VAMP4-201ENST00000236192 PPP2R5AQ15172 486 aa15.05■□□□□ -0
VAMP4-201ENST00000236192 CFAP45Q9UL16 551 aa15.05■□□□□ -0
VAMP4-201ENST00000236192 PPP6R1Q9UPN7 881 aa15.05■□□□□ -0
VAMP4-201ENST00000236192 MORC2Q9Y6X9 1032 aaPredicted RBP15.05■□□□□ -0
VAMP4-201ENST00000236192 CLNS1AP54105 237 aaKnown RBP15.04■□□□□ -0
VAMP4-201ENST00000236192 HDXQ7Z353 690 aa15.04■□□□□ -0
VAMP4-201ENST00000236192 TMEM57Q8N5G2 664 aa15.04■□□□□ -0
VAMP4-201ENST00000236192 TULP1O00294 542 aaPredicted RBP15.04■□□□□ -0
VAMP4-201ENST00000236192 KIF5CO60282 957 aa15.04■□□□□ -0
VAMP4-201ENST00000236192 MCTP2Q6DN12 878 aa15.04■□□□□ -0
VAMP4-201ENST00000236192 OTUD6BQ8N6M0 293 aa15.04■□□□□ -0
VAMP4-201ENST00000236192 CEP112Q8N8E3 955 aa15.04■□□□□ -0
VAMP4-201ENST00000236192 PDLIM2Q96JY6 352 aa15.04■□□□□ -0
VAMP4-201ENST00000236192 ANKRD36BQ8N2N9 1353 aa15.04■□□□□ -0
VAMP4-201ENST00000236192 TMX3Q96JJ7 454 aa15.04■□□□□ -0
VAMP4-201ENST00000236192 GPRASP1Q5JY77 1395 aa15.04■□□□□ -0
VAMP4-201ENST00000236192 ANO6Q4KMQ2 910 aa15.04■□□□□ -0
VAMP4-201ENST00000236192 CASKIN1Q8WXD9 1431 aa15.04■□□□□ -0
VAMP4-201ENST00000236192 NEFHP12036 1026 aa15.03■□□□□ -0
VAMP4-201ENST00000236192 STX1AQ16623 288 aa15.03■□□□□ -0
VAMP4-201ENST00000236192 RBM33Q96EV2 1170 aaKnown RBP15.03■□□□□ -0
VAMP4-201ENST00000236192 TUBB4BP68371 445 aa15.03■□□□□ -0
VAMP4-201ENST00000236192 AKAP17AQ02040 695 aaKnown RBP15.03■□□□□ -0
VAMP4-201ENST00000236192 CCDC148Q8NFR7 591 aa15.03■□□□□ -0
VAMP4-201ENST00000236192 MYCNP04198 464 aaPredicted RBP15.03■□□□□ -0
VAMP4-201ENST00000236192 FYCO1Q9BQS8 1478 aa15.03■□□□□ -0
VAMP4-201ENST00000236192 SMC1AQ14683 1233 aaKnown RBP15.03■□□□□ -0
VAMP4-201ENST00000236192 CTNNA3Q9UI47 895 aa15.02■□□□□ -0
VAMP4-201ENST00000236192 STX6O43752 255 aa15.02■□□□□ -0
VAMP4-201ENST00000236192 ARID4AP29374 1257 aaPredicted RBP15.02■□□□□ -0
VAMP4-201ENST00000236192 TMC6Q7Z403 805 aa15.02■□□□□ -0
VAMP4-201ENST00000236192 PPFIBP1Q86W92 1011 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms