RNA–Protein interactions for RNA: ENST00000229214.8

KRR1-201, Transcript of KRR1, small subunit processome component homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRR1, Length 10,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-201ENST00000229214 GCC1Q96CN9 775 aa6.18□□□□□ -1.42
KRR1-201ENST00000229214 KIF2CQ99661 725 aa6.18□□□□□ -1.42
KRR1-201ENST00000229214 MYH9P35579 1960 aaKnown RBP6.18□□□□□ -1.42
KRR1-201ENST00000229214 ABCC11Q96J66 1382 aa6.18□□□□□ -1.42
KRR1-201ENST00000229214 FRAT2O75474 233 aaPredicted RBP6.18□□□□□ -1.42
KRR1-201ENST00000229214 GSDMDP57764 484 aa6.18□□□□□ -1.42
KRR1-201ENST00000229214 CCDC192P0DO97 292 aa6.18□□□□□ -1.42
KRR1-201ENST00000229214 CCDC57Q2TAC2 916 aa6.18□□□□□ -1.42
KRR1-201ENST00000229214 AMER1Q5JTC6 1135 aaPredicted RBP6.18□□□□□ -1.42
KRR1-201ENST00000229214 KIF3CO14782 793 aa6.18□□□□□ -1.42
KRR1-201ENST00000229214 MYO1BO43795 1136 aa6.18□□□□□ -1.42
KRR1-201ENST00000229214 HOMER1Q86YM7 354 aa6.18□□□□□ -1.42
KRR1-201ENST00000229214 DNAJC2Q99543 621 aaKnown RBP6.18□□□□□ -1.42
KRR1-201ENST00000229214 IVLP07476 585 aa6.18□□□□□ -1.42
KRR1-201ENST00000229214 NOC2LQ9Y3T9 749 aaKnown RBP6.18□□□□□ -1.42
KRR1-201ENST00000229214 RAB3GAP2Q9H2M9 1393 aa6.18□□□□□ -1.42
KRR1-201ENST00000229214 PPP4R3AQ6IN85 833 aa6.18□□□□□ -1.42
KRR1-201ENST00000229214 GAS2L2Q8NHY3 880 aa6.18□□□□□ -1.42
KRR1-201ENST00000229214 SPAG17Q6Q759 2223 aa6.17□□□□□ -1.42
KRR1-201ENST00000229214 IRX4P78413 519 aa6.17□□□□□ -1.42
KRR1-201ENST00000229214 ATL3Q6DD88 541 aa6.17□□□□□ -1.42
KRR1-201ENST00000229214 RRP9O43818 475 aaKnown RBP6.17□□□□□ -1.42
KRR1-201ENST00000229214 MAP4K4O95819 1239 aaPredicted RBP6.17□□□□□ -1.42
KRR1-201ENST00000229214 GSE1Q14687 1217 aa6.17□□□□□ -1.42
KRR1-201ENST00000229214 TTLL5Q6EMB2 1281 aa6.17□□□□□ -1.42
KRR1-201ENST00000229214 KIAA1328Q86T90 577 aa6.17□□□□□ -1.42
KRR1-201ENST00000229214 VPS37DQ86XT2 251 aa6.17□□□□□ -1.42
KRR1-201ENST00000229214 CNKSR2Q8WXI2 1034 aa6.17□□□□□ -1.42
KRR1-201ENST00000229214 SSR1P43307 286 aaKnown RBP6.17□□□□□ -1.42
KRR1-201ENST00000229214 NASPP49321 788 aaPredicted RBP6.17□□□□□ -1.42
KRR1-201ENST00000229214 MSANTD4Q8NCY6 345 aa6.17□□□□□ -1.42
KRR1-201ENST00000229214 MKRN1Q9UHC7 482 aaKnown RBP6.17□□□□□ -1.42
KRR1-201ENST00000229214 GOLGA8QA0A0J9YX86 632 aa6.17□□□□□ -1.42
KRR1-201ENST00000229214 GOLGA8OA6NCC3 632 aa6.17□□□□□ -1.42
KRR1-201ENST00000229214 GOLGA8NF8WBI6 632 aa6.17□□□□□ -1.42
KRR1-201ENST00000229214 FAM43AQ8N2R8 423 aa6.17□□□□□ -1.42
KRR1-201ENST00000229214 IQSEC3Q9UPP2 1182 aaPredicted RBP6.17□□□□□ -1.42
KRR1-201ENST00000229214 MMRN2Q9H8L6 949 aa6.17□□□□□ -1.42
KRR1-201ENST00000229214 ATP2A1O14983 1001 aa6.17□□□□□ -1.42
KRR1-201ENST00000229214 NOL7Q9UMY1 257 aaKnown RBP6.17□□□□□ -1.42
KRR1-201ENST00000229214 JRKLQ9Y4A0 524 aa6.17□□□□□ -1.42
KRR1-201ENST00000229214 TAOK1Q7L7X3 1001 aa6.17□□□□□ -1.42
KRR1-201ENST00000229214 ANKRD62A6NC57 917 aa6.17□□□□□ -1.42
KRR1-201ENST00000229214 ANAPC15P60006 121 aa6.17□□□□□ -1.42
KRR1-201ENST00000229214 EP400NLQ6ZTU2 488 aa6.16□□□□□ -1.42
KRR1-201ENST00000229214 CALCOCO1Q9P1Z2 691 aa6.16□□□□□ -1.42
KRR1-201ENST00000229214 TMCO5BA8MYB1 307 aa6.16□□□□□ -1.42
KRR1-201ENST00000229214 IGSF3O75054 1194 aa6.16□□□□□ -1.42
KRR1-201ENST00000229214 CEP135Q66GS9 1140 aa6.16□□□□□ -1.42
KRR1-201ENST00000229214 SMARCC1Q92922 1105 aaPredicted RBP6.16□□□□□ -1.42
KRR1-201ENST00000229214 SCAND2PQ9GZW5 306 aaPredicted RBP6.16□□□□□ -1.42
KRR1-201ENST00000229214 NUP155O75694 1391 aa6.16□□□□□ -1.42
KRR1-201ENST00000229214 EPB41L2O43491 1005 aaKnown RBP6.16□□□□□ -1.42
KRR1-201ENST00000229214 PAK3O75914 559 aaPredicted RBP6.16□□□□□ -1.42
KRR1-201ENST00000229214 PSME1Q06323 249 aa6.16□□□□□ -1.42
KRR1-201ENST00000229214 SPC24Q8NBT2 197 aa6.16□□□□□ -1.42
KRR1-201ENST00000229214 ZSCAN31Q96LW9 406 aaPredicted RBP6.16□□□□□ -1.42
KRR1-201ENST00000229214 FSD1Q9BTV5 496 aa6.16□□□□□ -1.42
KRR1-201ENST00000229214 WDR33Q9C0J8 1336 aaKnown RBP6.16□□□□□ -1.42
KRR1-201ENST00000229214 MCTP2Q6DN12 878 aa6.16□□□□□ -1.42
KRR1-201ENST00000229214 CLASRPQ8N2M8 674 aaKnown RBP6.16□□□□□ -1.42
KRR1-201ENST00000229214 ZNF713Q8N859 430 aaPredicted RBP6.16□□□□□ -1.42
KRR1-201ENST00000229214 PFDN4Q9NQP4 134 aa6.16□□□□□ -1.42
KRR1-201ENST00000229214 ANKS4BQ8N8V4 417 aa6.16□□□□□ -1.42
KRR1-201ENST00000229214 RAB3IPQ96QF0 476 aaPredicted RBP6.16□□□□□ -1.42
KRR1-201ENST00000229214 LRPPRCP42704 1394 aaKnown RBP6.16□□□□□ -1.42
KRR1-201ENST00000229214 PPFIA2O75334 1257 aa6.16□□□□□ -1.42
KRR1-201ENST00000229214 PPP2R5AQ15172 486 aa6.16□□□□□ -1.42
KRR1-201ENST00000229214 ARFGAP2Q8N6H7 521 aa6.16□□□□□ -1.42
KRR1-201ENST00000229214 ZMYM3Q14202 1370 aa6.16□□□□□ -1.42
KRR1-201ENST00000229214 PABPN1LA6NDY0 278 aaKnown RBP6.16□□□□□ -1.42
KRR1-201ENST00000229214 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.16□□□□□ -1.427e-8■■■■□ 20
KRR1-201ENST00000229214 C9orf78Q9NZ63 289 aaPredicted RBP6.16□□□□□ -1.42
KRR1-201ENST00000229214 FEZ2Q9UHY8 353 aaPredicted RBP6.16□□□□□ -1.42
KRR1-201ENST00000229214 RANBP1P43487 201 aa6.15□□□□□ -1.42
KRR1-201ENST00000229214 AMPD3Q01432 767 aa6.15□□□□□ -1.42
KRR1-201ENST00000229214 HS1BP3Q53T59 392 aa6.15□□□□□ -1.42
KRR1-201ENST00000229214 BICDL1Q6ZP65 573 aa6.15□□□□□ -1.42
KRR1-201ENST00000229214 ANKRD12Q6UB98 2062 aa6.15□□□□□ -1.42
KRR1-201ENST00000229214 MYO18AQ92614 2054 aaKnown RBP6.15□□□□□ -1.42
KRR1-201ENST00000229214 FERP16591 822 aa6.15□□□□□ -1.42
KRR1-201ENST00000229214 COG3Q96JB2 828 aa6.15□□□□□ -1.42
KRR1-201ENST00000229214 DDX49Q9Y6V7 483 aaKnown RBP6.15□□□□□ -1.42
KRR1-201ENST00000229214 ZBTB17Q13105 803 aa6.15□□□□□ -1.42
KRR1-201ENST00000229214 KIF4BQ2VIQ3 1234 aa6.15□□□□□ -1.42
KRR1-201ENST00000229214 PPP1R2P3Q6NXS1 205 aa6.15□□□□□ -1.42
KRR1-201ENST00000229214 HSPA8P11142 646 aaKnown RBP6.15□□□□□ -1.42
KRR1-201ENST00000229214 IPO4Q8TEX9 1081 aaKnown RBP6.15□□□□□ -1.42
KRR1-201ENST00000229214 RTEL1Q9NZ71 1219 aa6.15□□□□□ -1.42
KRR1-201ENST00000229214 LMOD2Q6P5Q4 547 aa6.15□□□□□ -1.43
KRR1-201ENST00000229214 CNTROBQ8N137 903 aa6.15□□□□□ -1.43
KRR1-201ENST00000229214 CFAP65Q6ZU64 1925 aaKnown RBP6.15□□□□□ -1.43
KRR1-201ENST00000229214 ALDH3A1P30838 453 aa6.15□□□□□ -1.43
KRR1-201ENST00000229214 CCT4P50991 539 aaKnown RBP6.15□□□□□ -1.43
KRR1-201ENST00000229214 CEP57L1Q8IYX8 460 aa6.15□□□□□ -1.43
KRR1-201ENST00000229214 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.15□□□□□ -1.43
KRR1-201ENST00000229214 CCDC96Q2M329 555 aa6.15□□□□□ -1.43
KRR1-201ENST00000229214 SPATS2Q86XZ4 545 aaKnown RBP6.15□□□□□ -1.43
KRR1-201ENST00000229214 ZNF830Q96NB3 372 aaPredicted RBP6.15□□□□□ -1.43
KRR1-201ENST00000229214 LOC105371045A0A1W2PR82 267 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms