RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 MEIS3Q99687 375 aa17.49■□□□□ 0.39
SFXN3-201ENST00000224807 TSPY26PQ9H489 355 aa17.49■□□□□ 0.39
SFXN3-201ENST00000224807 HCLS1P14317 486 aaPredicted RBP17.48■□□□□ 0.39
SFXN3-201ENST00000224807 TMX3Q96JJ7 454 aa17.48■□□□□ 0.39
SFXN3-201ENST00000224807 COL3A1P02461 1466 aaPredicted RBP17.48■□□□□ 0.39
SFXN3-201ENST00000224807 FIBPO43427 364 aa17.48■□□□□ 0.39
SFXN3-201ENST00000224807 IL16Q14005 1332 aa17.48■□□□□ 0.39
SFXN3-201ENST00000224807 PRDM4Q9UKN5 801 aa17.47■□□□□ 0.39
SFXN3-201ENST00000224807 GLI2P10070 1586 aa17.47■□□□□ 0.39
SFXN3-201ENST00000224807 SASS6Q6UVJ0 657 aa17.47■□□□□ 0.39
SFXN3-201ENST00000224807 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.46■□□□□ 0.39
SFXN3-201ENST00000224807 A0A1W2PP64 1363 aa17.46■□□□□ 0.39
SFXN3-201ENST00000224807 NPATQ14207 1427 aa17.46■□□□□ 0.39
SFXN3-201ENST00000224807 PUS7Q96PZ0 661 aaKnown RBP17.46■□□□□ 0.39
SFXN3-201ENST00000224807 TERF2IPQ9NYB0 399 aa17.46■□□□□ 0.39
SFXN3-201ENST00000224807 STAG3Q9UJ98 1225 aa17.46■□□□□ 0.39
SFXN3-201ENST00000224807 PALD1Q9ULE6 856 aa17.46■□□□□ 0.39
SFXN3-201ENST00000224807 KIDINS220Q9ULH0 1771 aa17.46■□□□□ 0.39
SFXN3-201ENST00000224807 MCM10Q7L590 875 aa17.46■□□□□ 0.38
SFXN3-201ENST00000224807 PPP4R3BQ5MIZ7 849 aa17.45■□□□□ 0.38
SFXN3-201ENST00000224807 CFAP74Q9C0B2 1584 aa17.45■□□□□ 0.38
SFXN3-201ENST00000224807 ARHGEF28Q8N1W1 1705 aaKnown RBP17.45■□□□□ 0.38
SFXN3-201ENST00000224807 CSPP1Q1MSJ5 1256 aa17.45■□□□□ 0.38
SFXN3-201ENST00000224807 HDGFL2Q7Z4V5 671 aaPredicted RBP17.44■□□□□ 0.38
SFXN3-201ENST00000224807 ALDH1L2Q3SY69 923 aa17.44■□□□□ 0.38
SFXN3-201ENST00000224807 ZNF500O60304 480 aaPredicted RBP17.43■□□□□ 0.38
SFXN3-201ENST00000224807 REC8O95072 547 aa17.43■□□□□ 0.38
SFXN3-201ENST00000224807 IL1RAPL2Q9NP60 686 aa17.43■□□□□ 0.38
SFXN3-201ENST00000224807 NCKAP5LQ9HCH0 1330 aa17.42■□□□□ 0.38
SFXN3-201ENST00000224807 ERC2O15083 957 aa17.42■□□□□ 0.38
SFXN3-201ENST00000224807 DYNC1I1O14576 645 aa17.42■□□□□ 0.38
SFXN3-201ENST00000224807 ADCY5O95622 1261 aa17.42■□□□□ 0.38
SFXN3-201ENST00000224807 GNAI1P63096 354 aa17.42■□□□□ 0.38
SFXN3-201ENST00000224807 GIMAP6Q6P9H5 292 aa17.41■□□□□ 0.38
SFXN3-201ENST00000224807 WAPLQ7Z5K2 1190 aa17.41■□□□□ 0.38
SFXN3-201ENST00000224807 USP48Q86UV5 1035 aa17.41■□□□□ 0.38
SFXN3-201ENST00000224807 RPGRIP1LQ68CZ1 1315 aa17.41■□□□□ 0.38
SFXN3-201ENST00000224807 CPA1P15085 419 aa17.41■□□□□ 0.38
SFXN3-201ENST00000224807 NFE2L2Q16236 605 aa17.41■□□□□ 0.38
SFXN3-201ENST00000224807 PDLIM2Q96JY6 352 aa17.41■□□□□ 0.38
SFXN3-201ENST00000224807 API5Q9BZZ5 524 aaKnown RBP17.41■□□□□ 0.38
SFXN3-201ENST00000224807 CNPY2Q9Y2B0 182 aa17.41■□□□□ 0.38
SFXN3-201ENST00000224807 MED14O60244 1454 aa17.41■□□□□ 0.38
SFXN3-201ENST00000224807 MAP7D2Q96T17 732 aa17.41■□□□□ 0.38
SFXN3-201ENST00000224807 NME9Q86XW9 330 aa17.4■□□□□ 0.38
SFXN3-201ENST00000224807 AEBP1Q8IUX7 1158 aa17.4■□□□□ 0.38
SFXN3-201ENST00000224807 SLC4A2P04920 1241 aa17.4■□□□□ 0.38
SFXN3-201ENST00000224807 NOLC1Q14978 699 aaKnown RBP eCLIP17.4■□□□□ 0.38
SFXN3-201ENST00000224807 CHMP4BQ9H444 224 aaKnown RBP17.4■□□□□ 0.38
SFXN3-201ENST00000224807 CAMSAP1Q5T5Y3 1602 aa17.4■□□□□ 0.38
SFXN3-201ENST00000224807 CDK19Q9BWU1 502 aa17.39■□□□□ 0.38
SFXN3-201ENST00000224807 CWC22Q9HCG8 908 aaKnown RBP17.39■□□□□ 0.38
SFXN3-201ENST00000224807 DCTPP1Q9H773 170 aa17.39■□□□□ 0.37
SFXN3-201ENST00000224807 POLKQ9UBT6 870 aa17.39■□□□□ 0.37
SFXN3-201ENST00000224807 FCHSD2O94868 740 aa17.38■□□□□ 0.37
SFXN3-201ENST00000224807 CYP2E1P05181 493 aaPredicted RBP17.38■□□□□ 0.37
SFXN3-201ENST00000224807 DRC7Q8IY82 874 aa17.38■□□□□ 0.37
SFXN3-201ENST00000224807 U2AF2P26368 475 aaKnown RBP eCLIP17.38■□□□□ 0.37
SFXN3-201ENST00000224807 ZNF592Q92610 1267 aa17.38■□□□□ 0.37
SFXN3-201ENST00000224807 CAMK4Q16566 473 aa17.37■□□□□ 0.37
SFXN3-201ENST00000224807 ATP2B3Q16720 1220 aa17.37■□□□□ 0.37
SFXN3-201ENST00000224807 CEP85Q6P2H3 762 aa17.37■□□□□ 0.37
SFXN3-201ENST00000224807 MBD3O95983 291 aa17.37■□□□□ 0.37
SFXN3-201ENST00000224807 SYAP1Q96A49 352 aaPredicted RBP17.36■□□□□ 0.37
SFXN3-201ENST00000224807 TAOK2Q9UL54 1235 aa17.36■□□□□ 0.37
SFXN3-201ENST00000224807 NPHP1O15259 732 aa17.36■□□□□ 0.37
SFXN3-201ENST00000224807 VPS37CA5D8V6 355 aaPredicted RBP17.36■□□□□ 0.37
SFXN3-201ENST00000224807 BRPF1P55201 1214 aaPredicted RBP17.36■□□□□ 0.37
SFXN3-201ENST00000224807 FERMT3Q86UX7 667 aa17.36■□□□□ 0.37
SFXN3-201ENST00000224807 NUTM1Q86Y26 1132 aa17.36■□□□□ 0.37
SFXN3-201ENST00000224807 G2E3Q7L622 706 aa17.35■□□□□ 0.37
SFXN3-201ENST00000224807 CCDC94Q9BW85 323 aaPredicted RBP17.35■□□□□ 0.37
SFXN3-201ENST00000224807 VGFO15240 615 aaPredicted RBP17.35■□□□□ 0.37
SFXN3-201ENST00000224807 SULT6B1Q6IMI4 303 aa17.35■□□□□ 0.37
SFXN3-201ENST00000224807 KIF3AQ9Y496 699 aa17.35■□□□□ 0.37
SFXN3-201ENST00000224807 NEXMIFQ5QGS0 1516 aa17.35■□□□□ 0.37
SFXN3-201ENST00000224807 ANKRD26Q9UPS8 1709 aa17.35■□□□□ 0.37
SFXN3-201ENST00000224807 CLEC17AQ6ZS10 378 aa17.34■□□□□ 0.37
SFXN3-201ENST00000224807 LRRC7Q96NW7 1537 aa17.34■□□□□ 0.37
SFXN3-201ENST00000224807 MCCP23508 829 aa17.34■□□□□ 0.37
SFXN3-201ENST00000224807 PNPLA6Q8IY17 1366 aa17.34■□□□□ 0.37
SFXN3-201ENST00000224807 ZNF710Q8N1W2 664 aa17.34■□□□□ 0.37
SFXN3-201ENST00000224807 CD163L1Q9NR16 1453 aa17.34■□□□□ 0.37
SFXN3-201ENST00000224807 FRMPD1Q5SYB0 1578 aa17.34■□□□□ 0.37
SFXN3-201ENST00000224807 PDE1AP54750 535 aa17.34■□□□□ 0.37
SFXN3-201ENST00000224807 HS1BP3Q53T59 392 aa17.34■□□□□ 0.37
SFXN3-201ENST00000224807 FAM173BQ6P4H8 233 aa17.34■□□□□ 0.37
SFXN3-201ENST00000224807 UNC5CLQ8IV45 518 aa17.34■□□□□ 0.37
SFXN3-201ENST00000224807 FBXW7Q969H0 707 aa17.34■□□□□ 0.37
SFXN3-201ENST00000224807 PIK3R4Q99570 1358 aa17.33■□□□□ 0.37
SFXN3-201ENST00000224807 MSH6P52701 1360 aa17.33■□□□□ 0.36
SFXN3-201ENST00000224807 NAA30Q147X3 362 aaPredicted RBP17.33■□□□□ 0.36
SFXN3-201ENST00000224807 ANKRD44Q8N8A2 993 aa17.33■□□□□ 0.36
SFXN3-201ENST00000224807 PTCH1Q13635 1447 aa17.33■□□□□ 0.36
SFXN3-201ENST00000224807 PDCL2Q8N4E4 241 aa17.32■□□□□ 0.36
SFXN3-201ENST00000224807 BCL2L12Q9HB09 334 aa17.32■□□□□ 0.36
SFXN3-201ENST00000224807 HECW2Q9P2P5 1572 aa17.32■□□□□ 0.36
SFXN3-201ENST00000224807 SIGLEC1Q9BZZ2 1709 aa17.32■□□□□ 0.36
SFXN3-201ENST00000224807 IDI1Q13907 227 aa17.32■□□□□ 0.36
SFXN3-201ENST00000224807 C16orf45Q96MC5 204 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms