RNA–Protein interactions for RNA: ENST00000221573.10

SNAPC2-201, Transcript of small nuclear RNA activating complex polypeptide 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC2-201ENST00000221573 MYT1Q01538 1121 aa25.94■■□□□ 1.74
SNAPC2-201ENST00000221573 PNISRQ8TF01 805 aaKnown RBP25.94■■□□□ 1.74
SNAPC2-201ENST00000221573 RGS12O14924 1447 aa25.94■■□□□ 1.74
SNAPC2-201ENST00000221573 ONECUT3O60422 494 aaPredicted RBP25.93■■□□□ 1.74
SNAPC2-201ENST00000221573 TATP17735 454 aaPredicted RBP25.93■■□□□ 1.74
SNAPC2-201ENST00000221573 ADAMTS8Q9UP79 889 aa25.93■■□□□ 1.74
SNAPC2-201ENST00000221573 PRKAR2BP31323 418 aa25.92■■□□□ 1.74
SNAPC2-201ENST00000221573 CDCA7Q9BWT1 371 aaPredicted RBP25.92■■□□□ 1.74
SNAPC2-201ENST00000221573 SEPT12Q8IYM1 358 aa25.91■■□□□ 1.74
SNAPC2-201ENST00000221573 TNS2Q63HR2 1409 aa25.91■■□□□ 1.74
SNAPC2-201ENST00000221573 FCHSD2O94868 740 aa25.9■■□□□ 1.74
SNAPC2-201ENST00000221573 DDB1Q16531 1140 aa25.88■■□□□ 1.73
SNAPC2-201ENST00000221573 FAM9BQ8IZU0 186 aa25.88■■□□□ 1.73
SNAPC2-201ENST00000221573 PLEKHG2Q9H7P9 1386 aa25.86■■□□□ 1.73
SNAPC2-201ENST00000221573 CCDC146Q8IYE0 955 aa25.86■■□□□ 1.73
SNAPC2-201ENST00000221573 ZCRB1Q8TBF4 217 aaKnown RBP25.86■■□□□ 1.73
SNAPC2-201ENST00000221573 PHACTR3Q96KR7 559 aa25.86■■□□□ 1.73
SNAPC2-201ENST00000221573 PLEKHF1Q96S99 279 aa25.86■■□□□ 1.73
SNAPC2-201ENST00000221573 EXOC5O00471 708 aa25.85■■□□□ 1.73
SNAPC2-201ENST00000221573 DLG5Q8TDM6 1919 aa25.84■■□□□ 1.73
SNAPC2-201ENST00000221573 PLEKHO1Q53GL0 409 aaPredicted RBP25.83■■□□□ 1.72
SNAPC2-201ENST00000221573 VIRMAQ69YN4 1812 aaKnown RBP25.82■■□□□ 1.72
SNAPC2-201ENST00000221573 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.82■■□□□ 1.72
SNAPC2-201ENST00000221573 SPG7Q9UQ90 795 aa25.82■■□□□ 1.72
SNAPC2-201ENST00000221573 MTHFSDQ2M296 383 aaKnown RBP25.81■■□□□ 1.72
SNAPC2-201ENST00000221573 AMOTQ4VCS5 1084 aa25.81■■□□□ 1.72
SNAPC2-201ENST00000221573 PNNQ9H307 717 aaKnown RBP25.81■■□□□ 1.72
SNAPC2-201ENST00000221573 DDX54Q8TDD1 881 aaKnown RBP25.8■■□□□ 1.72
SNAPC2-201ENST00000221573 PCDH11XQ9BZA7 1347 aa25.8■■□□□ 1.72
SNAPC2-201ENST00000221573 PCDH11YQ9BZA8 1340 aa25.8■■□□□ 1.72
SNAPC2-201ENST00000221573 MAPK8IP3Q9UPT6 1336 aa25.8■■□□□ 1.72
SNAPC2-201ENST00000221573 CYP27B1O15528 508 aa25.79■■□□□ 1.72
SNAPC2-201ENST00000221573 PDE3BQ13370 1112 aa25.79■■□□□ 1.72
SNAPC2-201ENST00000221573 ZNF530Q6P9A1 599 aaPredicted RBP25.79■■□□□ 1.72
SNAPC2-201ENST00000221573 MARCH10Q8NA82 808 aaPredicted RBP25.79■■□□□ 1.72
SNAPC2-201ENST00000221573 RUNDC1Q96C34 613 aa25.79■■□□□ 1.72
SNAPC2-201ENST00000221573 NEFMP07197 916 aa25.78■■□□□ 1.72
SNAPC2-201ENST00000221573 FAM182BQ5T319 152 aa25.78■■□□□ 1.72
SNAPC2-201ENST00000221573 KRT27Q7Z3Y8 459 aa25.78■■□□□ 1.72
SNAPC2-201ENST00000221573 PHKG2P15735 406 aa25.76■■□□□ 1.71
SNAPC2-201ENST00000221573 DOT1LQ8TEK3 1739 aa25.76■■□□□ 1.71
SNAPC2-201ENST00000221573 TOGARAM1Q9Y4F4 1720 aa25.76■■□□□ 1.71
SNAPC2-201ENST00000221573 GAS2L2Q8NHY3 880 aa25.75■■□□□ 1.71
SNAPC2-201ENST00000221573 IFNL2Q8IZJ0 200 aa25.74■■□□□ 1.71
SNAPC2-201ENST00000221573 SBF2Q86WG5 1849 aa25.74■■□□□ 1.71
SNAPC2-201ENST00000221573 SCN11AQ9UI33 1791 aa25.74■■□□□ 1.71
SNAPC2-201ENST00000221573 SENP3-EIF4A1A0A087X0R7 540 aa25.73■■□□□ 1.71
SNAPC2-201ENST00000221573 KAT6BQ8WYB5 2073 aa25.73■■□□□ 1.71
SNAPC2-201ENST00000221573 C1orf141Q5JVX7 400 aa25.73■■□□□ 1.71
SNAPC2-201ENST00000221573 APAF1O14727 1248 aa25.72■■□□□ 1.71
SNAPC2-201ENST00000221573 NFE2L2Q16236 605 aa25.72■■□□□ 1.71
SNAPC2-201ENST00000221573 AKAP4Q5JQC9 854 aa25.72■■□□□ 1.71
SNAPC2-201ENST00000221573 RRP7AQ9Y3A4 280 aaKnown RBP25.72■■□□□ 1.71
SNAPC2-201ENST00000221573 MAP3K5Q99683 1374 aa25.72■■□□□ 1.71
SNAPC2-201ENST00000221573 ADAMTS7Q9UKP4 1686 aa25.71■■□□□ 1.71
SNAPC2-201ENST00000221573 EP400Q96L91 3159 aa25.7■■□□□ 1.71
SNAPC2-201ENST00000221573 KDM6AO15550 1401 aaPredicted RBP25.7■■□□□ 1.71
SNAPC2-201ENST00000221573 TMPOP42166 694 aaKnown RBP25.7■■□□□ 1.7
SNAPC2-201ENST00000221573 ITGB4P16144 1822 aa25.7■■□□□ 1.7
SNAPC2-201ENST00000221573 NKX1-1Q15270 411 aaPredicted RBP25.68■■□□□ 1.7
SNAPC2-201ENST00000221573 NEUROD2Q15784 382 aa25.68■■□□□ 1.7
SNAPC2-201ENST00000221573 GNAT3A8MTJ3 354 aa25.68■■□□□ 1.7
SNAPC2-201ENST00000221573 MPRIPQ6WCQ1 1025 aa25.68■■□□□ 1.7
SNAPC2-201ENST00000221573 RIPK4P57078 832 aa25.67■■□□□ 1.7
SNAPC2-201ENST00000221573 NHSQ6T4R5 1651 aa25.67■■□□□ 1.7
SNAPC2-201ENST00000221573 BCL9O00512 1426 aa25.66■■□□□ 1.7
SNAPC2-201ENST00000221573 HSP90AB1P08238 724 aaKnown RBP25.65■■□□□ 1.7
SNAPC2-201ENST00000221573 ILDR2Q71H61 639 aa25.65■■□□□ 1.7
SNAPC2-201ENST00000221573 ACSBG1Q96GR2 724 aa25.64■■□□□ 1.7
SNAPC2-201ENST00000221573 DCAF5Q96JK2 942 aa25.64■■□□□ 1.7
SNAPC2-201ENST00000221573 LGR6Q9HBX8 967 aa25.64■■□□□ 1.7
SNAPC2-201ENST00000221573 DCTN1Q14203 1278 aa25.63■■□□□ 1.69
SNAPC2-201ENST00000221573 FAM196AQ6ZSG2 479 aa25.63■■□□□ 1.69
SNAPC2-201ENST00000221573 SIPA1L3O60292 1781 aaPredicted RBP25.63■■□□□ 1.69
SNAPC2-201ENST00000221573 RNMTO43148 476 aaKnown RBP25.63■■□□□ 1.69
SNAPC2-201ENST00000221573 MCM10Q7L590 875 aa25.63■■□□□ 1.69
SNAPC2-201ENST00000221573 IL17REQ8NFR9 667 aa25.62■■□□□ 1.69
SNAPC2-201ENST00000221573 RTF1Q92541 710 aaKnown RBP25.61■■□□□ 1.69
SNAPC2-201ENST00000221573 TRIM35Q9UPQ4 493 aa25.61■■□□□ 1.69
SNAPC2-201ENST00000221573 MRC1P22897 1456 aa25.61■■□□□ 1.69
SNAPC2-201ENST00000221573 BTAF1O14981 1849 aa25.6■■□□□ 1.69
SNAPC2-201ENST00000221573 SALL2Q9Y467 1007 aaPredicted RBP25.6■■□□□ 1.69
SNAPC2-201ENST00000221573 CEMIPQ8WUJ3 1361 aa25.6■■□□□ 1.69
SNAPC2-201ENST00000221573 KCNQ2O43526 872 aa25.59■■□□□ 1.69
SNAPC2-201ENST00000221573 HTATSF1O43719 755 aaKnown RBP25.59■■□□□ 1.69
SNAPC2-201ENST00000221573 THUMPD2Q9BTF0 503 aaKnown RBP25.59■■□□□ 1.69
SNAPC2-201ENST00000221573 TNS1Q9HBL0 1735 aaKnown RBP25.59■■□□□ 1.69
SNAPC2-201ENST00000221573 PRIM1P49642 420 aaKnown RBP25.58■■□□□ 1.69
SNAPC2-201ENST00000221573 PTF1AQ7RTS3 328 aa25.58■■□□□ 1.69
SNAPC2-201ENST00000221573 SYTL4Q96C24 671 aaPredicted RBP25.58■■□□□ 1.69
SNAPC2-201ENST00000221573 LMOD3Q0VAK6 560 aa25.58■■□□□ 1.68
SNAPC2-201ENST00000221573 ERVV-2B6SEH9 535 aa25.56■■□□□ 1.68
SNAPC2-201ENST00000221573 TRIM37O94972 964 aa25.56■■□□□ 1.68
SNAPC2-201ENST00000221573 SLC52A2Q9HAB3 445 aa25.55■■□□□ 1.68
SNAPC2-201ENST00000221573 CABP4P57796 275 aa25.54■■□□□ 1.68
SNAPC2-201ENST00000221573 NFATC2IPQ8NCF5 419 aa25.53■■□□□ 1.68
SNAPC2-201ENST00000221573 TMOD3Q9NYL9 352 aa25.53■■□□□ 1.68
SNAPC2-201ENST00000221573 PAPPAQ13219 1627 aa25.53■■□□□ 1.68
SNAPC2-201ENST00000221573 TEFQ10587 303 aa25.53■■□□□ 1.68
SNAPC2-201ENST00000221573 CCDC27Q2M243 656 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms