RNA–Protein interactions for RNA: ENST00000216014.8

KDELR3-201, Transcript of KDEL endoplasmic reticulum protein retention receptor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDELR3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3-201ENST00000216014 ZNF772Q68DY9 489 aaPredicted RBP26.57■■□□□ 1.84
KDELR3-201ENST00000216014 IL2RBP14784 551 aa26.56■■□□□ 1.84
KDELR3-201ENST00000216014 BARGINQ6ZT62 677 aa26.55■■□□□ 1.84
KDELR3-201ENST00000216014 RAPGEF4Q8WZA2 1011 aa26.55■■□□□ 1.84
KDELR3-201ENST00000216014 MTHFSDQ2M296 383 aaKnown RBP26.54■■□□□ 1.84
KDELR3-201ENST00000216014 RUNDC1Q96C34 613 aa26.54■■□□□ 1.84
KDELR3-201ENST00000216014 BRWD3Q6RI45 1802 aa26.54■■□□□ 1.84
KDELR3-201ENST00000216014 PHF23Q9BUL5 403 aaPredicted RBP26.53■■□□□ 1.84
KDELR3-201ENST00000216014 THRAP3Q9Y2W1 955 aaKnown RBP26.53■■□□□ 1.84
KDELR3-201ENST00000216014 RRP7AQ9Y3A4 280 aaKnown RBP26.53■■□□□ 1.84
KDELR3-201ENST00000216014 TATP17735 454 aaPredicted RBP26.53■■□□□ 1.84
KDELR3-201ENST00000216014 APAF1O14727 1248 aa26.52■■□□□ 1.84
KDELR3-201ENST00000216014 VIRMAQ69YN4 1812 aaKnown RBP26.51■■□□□ 1.83
KDELR3-201ENST00000216014 ONECUT3O60422 494 aaPredicted RBP26.49■■□□□ 1.83
KDELR3-201ENST00000216014 CYP27B1O15528 508 aa26.48■■□□□ 1.83
KDELR3-201ENST00000216014 TNS2Q63HR2 1409 aa26.48■■□□□ 1.83
KDELR3-201ENST00000216014 RBM6P78332 1123 aaKnown RBP26.48■■□□□ 1.83
KDELR3-201ENST00000216014 TMPOP42166 694 aaKnown RBP26.47■■□□□ 1.83
KDELR3-201ENST00000216014 ZCRB1Q8TBF4 217 aaKnown RBP26.47■■□□□ 1.83
KDELR3-201ENST00000216014 MAPK8IP3Q9UPT6 1336 aa26.47■■□□□ 1.83
KDELR3-201ENST00000216014 NEUROD2Q15784 382 aa26.45■■□□□ 1.83
KDELR3-201ENST00000216014 SEPT12Q8IYM1 358 aa26.45■■□□□ 1.83
KDELR3-201ENST00000216014 SALL2Q9Y467 1007 aaPredicted RBP26.45■■□□□ 1.83
KDELR3-201ENST00000216014 RGS12O14924 1447 aa26.45■■□□□ 1.83
KDELR3-201ENST00000216014 NFE2L2Q16236 605 aa26.45■■□□□ 1.82
KDELR3-201ENST00000216014 PLEKHO1Q53GL0 409 aaPredicted RBP26.45■■□□□ 1.82
KDELR3-201ENST00000216014 ZNF530Q6P9A1 599 aaPredicted RBP26.45■■□□□ 1.82
KDELR3-201ENST00000216014 TOGARAM1Q9Y4F4 1720 aa26.44■■□□□ 1.82
KDELR3-201ENST00000216014 EP400Q96L91 3159 aa26.43■■□□□ 1.82
KDELR3-201ENST00000216014 A0A0G2JS52 829 aa26.43■■□□□ 1.82
KDELR3-201ENST00000216014 RXRBP28702 533 aa26.43■■□□□ 1.82
KDELR3-201ENST00000216014 MYT1Q01538 1121 aa26.43■■□□□ 1.82
KDELR3-201ENST00000216014 DDX54Q8TDD1 881 aaKnown RBP26.43■■□□□ 1.82
KDELR3-201ENST00000216014 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.43■■□□□ 1.82
KDELR3-201ENST00000216014 DDB1Q16531 1140 aa26.42■■□□□ 1.82
KDELR3-201ENST00000216014 CDCA7Q9BWT1 371 aaPredicted RBP26.42■■□□□ 1.82
KDELR3-201ENST00000216014 PNNQ9H307 717 aaKnown RBP26.42■■□□□ 1.82
KDELR3-201ENST00000216014 TRIM35Q9UPQ4 493 aa26.42■■□□□ 1.82
KDELR3-201ENST00000216014 FAM182BQ5T319 152 aa26.42■■□□□ 1.82
KDELR3-201ENST00000216014 MARCH10Q8NA82 808 aaPredicted RBP26.42■■□□□ 1.82
KDELR3-201ENST00000216014 SPG7Q9UQ90 795 aa26.42■■□□□ 1.82
KDELR3-201ENST00000216014 ADAMTS7Q9UKP4 1686 aa26.41■■□□□ 1.82
KDELR3-201ENST00000216014 PHKG2P15735 406 aa26.41■■□□□ 1.82
KDELR3-201ENST00000216014 DCTN1Q14203 1278 aa26.41■■□□□ 1.82
KDELR3-201ENST00000216014 AMOTQ4VCS5 1084 aa26.41■■□□□ 1.82
KDELR3-201ENST00000216014 PLEKHG2Q9H7P9 1386 aa26.41■■□□□ 1.82
KDELR3-201ENST00000216014 KDM6AO15550 1401 aaPredicted RBP26.41■■□□□ 1.82
KDELR3-201ENST00000216014 SCN11AQ9UI33 1791 aa26.4■■□□□ 1.82
KDELR3-201ENST00000216014 EXOC5O00471 708 aa26.4■■□□□ 1.82
KDELR3-201ENST00000216014 RIPK4P57078 832 aa26.4■■□□□ 1.82
KDELR3-201ENST00000216014 THUMPD2Q9BTF0 503 aaKnown RBP26.4■■□□□ 1.82
KDELR3-201ENST00000216014 YTHDC1Q96MU7 727 aaKnown RBP26.39■■□□□ 1.82
KDELR3-201ENST00000216014 GAS2L2Q8NHY3 880 aa26.39■■□□□ 1.81
KDELR3-201ENST00000216014 MAP3K5Q99683 1374 aa26.39■■□□□ 1.81
KDELR3-201ENST00000216014 PCDH11XQ9BZA7 1347 aa26.38■■□□□ 1.81
KDELR3-201ENST00000216014 PCDH11YQ9BZA8 1340 aa26.38■■□□□ 1.81
KDELR3-201ENST00000216014 HNRNPUQ00839 825 aaKnown RBP eCLIP26.38■■□□□ 1.81
KDELR3-201ENST00000216014 LGR6Q9HBX8 967 aa26.38■■□□□ 1.81
KDELR3-201ENST00000216014 MPRIPQ6WCQ1 1025 aa26.37■■□□□ 1.81
KDELR3-201ENST00000216014 MCM10Q7L590 875 aa26.37■■□□□ 1.81
KDELR3-201ENST00000216014 DOT1LQ8TEK3 1739 aa26.37■■□□□ 1.81
KDELR3-201ENST00000216014 IL17REQ8NFR9 667 aa26.36■■□□□ 1.81
KDELR3-201ENST00000216014 AKAP4Q5JQC9 854 aa26.36■■□□□ 1.81
KDELR3-201ENST00000216014 NEFMP07197 916 aa26.35■■□□□ 1.81
KDELR3-201ENST00000216014 IFNL2Q8IZJ0 200 aa26.35■■□□□ 1.81
KDELR3-201ENST00000216014 GNAT3A8MTJ3 354 aa26.34■■□□□ 1.81
KDELR3-201ENST00000216014 ITGB4P16144 1822 aa26.34■■□□□ 1.81
KDELR3-201ENST00000216014 SIPA1L3O60292 1781 aaPredicted RBP26.33■■□□□ 1.81
KDELR3-201ENST00000216014 C1orf141Q5JVX7 400 aa26.33■■□□□ 1.81
KDELR3-201ENST00000216014 NKX1-1Q15270 411 aaPredicted RBP26.32■■□□□ 1.8
KDELR3-201ENST00000216014 SBF2Q86WG5 1849 aa26.32■■□□□ 1.8
KDELR3-201ENST00000216014 KAT6BQ8WYB5 2073 aa26.32■■□□□ 1.8
KDELR3-201ENST00000216014 ZNF521Q96K83 1311 aa26.32■■□□□ 1.8
KDELR3-201ENST00000216014 WWC1Q8IX03 1113 aa26.31■■□□□ 1.8
KDELR3-201ENST00000216014 RNMTO43148 476 aaKnown RBP26.3■■□□□ 1.8
KDELR3-201ENST00000216014 PDE3BQ13370 1112 aa26.3■■□□□ 1.8
KDELR3-201ENST00000216014 CEMIPQ8WUJ3 1361 aa26.3■■□□□ 1.8
KDELR3-201ENST00000216014 PTF1AQ7RTS3 328 aa26.28■■□□□ 1.8
KDELR3-201ENST00000216014 KRT27Q7Z3Y8 459 aa26.28■■□□□ 1.8
KDELR3-201ENST00000216014 SPINK5Q9NQ38 1064 aaPredicted RBP26.28■■□□□ 1.8
KDELR3-201ENST00000216014 CCDC27Q2M243 656 aa26.27■■□□□ 1.8
KDELR3-201ENST00000216014 MRC1P22897 1456 aa26.27■■□□□ 1.8
KDELR3-201ENST00000216014 DCAF5Q96JK2 942 aa26.26■■□□□ 1.79
KDELR3-201ENST00000216014 ACSBG1Q96GR2 724 aa26.25■■□□□ 1.79
KDELR3-201ENST00000216014 HTATSF1O43719 755 aaKnown RBP26.25■■□□□ 1.79
KDELR3-201ENST00000216014 KCNQ2O43526 872 aa26.24■■□□□ 1.79
KDELR3-201ENST00000216014 RTF1Q92541 710 aaKnown RBP26.24■■□□□ 1.79
KDELR3-201ENST00000216014 CDCA7LQ96GN5 454 aa26.23■■□□□ 1.79
KDELR3-201ENST00000216014 NCBP3Q53F19 620 aaKnown RBP26.22■■□□□ 1.79
KDELR3-201ENST00000216014 NHSQ6T4R5 1651 aa26.22■■□□□ 1.79
KDELR3-201ENST00000216014 MIS18AQ9NYP9 233 aa26.22■■□□□ 1.79
KDELR3-201ENST00000216014 HSP90AB1P08238 724 aaKnown RBP26.21■■□□□ 1.79
KDELR3-201ENST00000216014 PRIM1P49642 420 aaKnown RBP26.21■■□□□ 1.79
KDELR3-201ENST00000216014 NFATC2IPQ8NCF5 419 aa26.21■■□□□ 1.79
KDELR3-201ENST00000216014 ZBED9Q6R2W3 1325 aa26.21■■□□□ 1.79
KDELR3-201ENST00000216014 LMOD3Q0VAK6 560 aa26.2■■□□□ 1.79
KDELR3-201ENST00000216014 KDM3BQ7LBC6 1761 aa26.2■■□□□ 1.78
KDELR3-201ENST00000216014 BCL9O00512 1426 aa26.2■■□□□ 1.78
KDELR3-201ENST00000216014 SLC52A2Q9HAB3 445 aa26.19■■□□□ 1.78
KDELR3-201ENST00000216014 PAPPAQ13219 1627 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms