RNA–Protein interactions for RNA: ENST00000081029.7

MRPS35-201, Transcript of mitochondrial ribosomal protein S35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS35, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-201ENST00000081029 TRIM37O94972 964 aa14.15□□□□□ -0.14
MRPS35-201ENST00000081029 SF3B2Q13435 895 aaKnown RBP14.15□□□□□ -0.14
MRPS35-201ENST00000081029 MEGF6O75095 1541 aa14.14□□□□□ -0.15
MRPS35-201ENST00000081029 KAT6BQ8WYB5 2073 aa14.14□□□□□ -0.15
MRPS35-201ENST00000081029 IGSF1Q8N6C5 1336 aa14.14□□□□□ -0.15
MRPS35-201ENST00000081029 PARP4Q9UKK3 1724 aaKnown RBP14.14□□□□□ -0.15
MRPS35-201ENST00000081029 EP400Q96L91 3159 aa14.13□□□□□ -0.15
MRPS35-201ENST00000081029 LRRC37A3O60309 1634 aa14.13□□□□□ -0.15
MRPS35-201ENST00000081029 ACSBG1Q96GR2 724 aa14.13□□□□□ -0.15
MRPS35-201ENST00000081029 NUDCQ9Y266 331 aa14.13□□□□□ -0.15
MRPS35-201ENST00000081029 U2AF1L5P0DN76 240 aaPredicted RBP14.12□□□□□ -0.15
MRPS35-201ENST00000081029 U2AF1Q01081 240 aaKnown RBP eCLIP14.12□□□□□ -0.15
MRPS35-201ENST00000081029 CCDC184Q52MB2 194 aa14.12□□□□□ -0.15
MRPS35-201ENST00000081029 SPG7Q9UQ90 795 aa14.12□□□□□ -0.15
MRPS35-201ENST00000081029 TNS2Q63HR2 1409 aa14.12□□□□□ -0.15
MRPS35-201ENST00000081029 WNK3Q9BYP7 1800 aa14.12□□□□□ -0.15
MRPS35-201ENST00000081029 MYBBP1AQ9BQG0 1328 aaKnown RBP14.11□□□□□ -0.15
MRPS35-201ENST00000081029 SYTL4Q96C24 671 aaPredicted RBP14.11□□□□□ -0.15
MRPS35-201ENST00000081029 OVOS2A0A0G2JMS6 1433 aa14.11□□□□□ -0.15
MRPS35-201ENST00000081029 APBA3O96018 575 aa14.1□□□□□ -0.15
MRPS35-201ENST00000081029 CENPBP07199 599 aaPredicted RBP14.1□□□□□ -0.15
MRPS35-201ENST00000081029 PLEKHO1Q53GL0 409 aaPredicted RBP14.1□□□□□ -0.15
MRPS35-201ENST00000081029 PTF1AQ7RTS3 328 aa14.1□□□□□ -0.15
MRPS35-201ENST00000081029 DEFB132Q7Z7B7 95 aa14.1□□□□□ -0.15
MRPS35-201ENST00000081029 CCDC125Q86Z20 511 aa14.1□□□□□ -0.15
MRPS35-201ENST00000081029 PCDH11XQ9BZA7 1347 aa14.09□□□□□ -0.15
MRPS35-201ENST00000081029 PCDH11YQ9BZA8 1340 aa14.09□□□□□ -0.15
MRPS35-201ENST00000081029 CYP27B1O15528 508 aa14.09□□□□□ -0.15
MRPS35-201ENST00000081029 KCNQ2O43526 872 aa14.09□□□□□ -0.15
MRPS35-201ENST00000081029 COL3A1P02461 1466 aaPredicted RBP14.08□□□□□ -0.16
MRPS35-201ENST00000081029 ZNF530Q6P9A1 599 aaPredicted RBP14.08□□□□□ -0.16
MRPS35-201ENST00000081029 NCAPD2Q15021 1401 aa14.07□□□□□ -0.16
MRPS35-201ENST00000081029 PRIM1P49642 420 aaKnown RBP14.07□□□□□ -0.16
MRPS35-201ENST00000081029 EN1Q05925 392 aaPredicted RBP14.07□□□□□ -0.16
MRPS35-201ENST00000081029 AMOTQ4VCS5 1084 aa14.07□□□□□ -0.16
MRPS35-201ENST00000081029 MRS2Q9HD23 443 aa14.07□□□□□ -0.16
MRPS35-201ENST00000081029 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.07□□□□□ -0.168e-7■■■■□ 19.7
MRPS35-201ENST00000081029 PRKAR2BP31323 418 aa14.06□□□□□ -0.16
MRPS35-201ENST00000081029 BAG6P46379 1132 aa14.06□□□□□ -0.16
MRPS35-201ENST00000081029 C1orf141Q5JVX7 400 aa14.06□□□□□ -0.16
MRPS35-201ENST00000081029 IFNL2Q8IZJ0 200 aa14.06□□□□□ -0.16
MRPS35-201ENST00000081029 BCL11BQ9C0K0 894 aaPredicted RBP14.06□□□□□ -0.16
MRPS35-201ENST00000081029 KDRP35968 1356 aa14.05□□□□□ -0.16
MRPS35-201ENST00000081029 PHKG2P15735 406 aa14.05□□□□□ -0.16
MRPS35-201ENST00000081029 RGPD1P0DJD0 1748 aa14.04□□□□□ -0.16
MRPS35-201ENST00000081029 MPRIPQ6WCQ1 1025 aa14.04□□□□□ -0.16
MRPS35-201ENST00000081029 FCHSD2O94868 740 aa14.04□□□□□ -0.16
MRPS35-201ENST00000081029 MTHFSDQ2M296 383 aaKnown RBP14.04□□□□□ -0.16
MRPS35-201ENST00000081029 PHACTR3Q96KR7 559 aa14.04□□□□□ -0.16
MRPS35-201ENST00000081029 RSPH6AQ9H0K4 717 aa14.04□□□□□ -0.16
MRPS35-201ENST00000081029 NEFMP07197 916 aa14.03□□□□□ -0.16
MRPS35-201ENST00000081029 WDR43Q15061 677 aaKnown RBP eCLIP14.03□□□□□ -0.16
MRPS35-201ENST00000081029 EZH2Q15910 746 aaKnown RBP14.02□□□□□ -0.16
MRPS35-201ENST00000081029 SHANK3Q9BYB0 1731 aa14.01□□□□□ -0.17
MRPS35-201ENST00000081029 HSP90AB1P08238 724 aaKnown RBP14.01□□□□□ -0.17
MRPS35-201ENST00000081029 BCL9O00512 1426 aa14.01□□□□□ -0.17
MRPS35-201ENST00000081029 SBF2Q86WG5 1849 aa14.01□□□□□ -0.17
MRPS35-201ENST00000081029 PKD1L3Q7Z443 1732 aa14□□□□□ -0.17
MRPS35-201ENST00000081029 NKX1-1Q15270 411 aaPredicted RBP14□□□□□ -0.17
MRPS35-201ENST00000081029 DCAF5Q96JK2 942 aa14□□□□□ -0.17
MRPS35-201ENST00000081029 AKAP4Q5JQC9 854 aa13.99□□□□□ -0.17
MRPS35-201ENST00000081029 FAM9BQ8IZU0 186 aa13.99□□□□□ -0.17
MRPS35-201ENST00000081029 TMOD3Q9NYL9 352 aa13.99□□□□□ -0.17
MRPS35-201ENST00000081029 CABP4P57796 275 aa13.99□□□□□ -0.17
MRPS35-201ENST00000081029 CCDC146Q8IYE0 955 aa13.99□□□□□ -0.17
MRPS35-201ENST00000081029 GAS2L2Q8NHY3 880 aa13.99□□□□□ -0.17
MRPS35-201ENST00000081029 PNISRQ8TF01 805 aaKnown RBP13.99□□□□□ -0.17
MRPS35-201ENST00000081029 CAMKK2Q96RR4 588 aa13.99□□□□□ -0.17
MRPS35-201ENST00000081029 PNNQ9H307 717 aaKnown RBP13.99□□□□□ -0.17
MRPS35-201ENST00000081029 LGR6Q9HBX8 967 aa13.99□□□□□ -0.17
MRPS35-201ENST00000081029 ADAMTS8Q9UP79 889 aa13.99□□□□□ -0.17
MRPS35-201ENST00000081029 MAPK8IP3Q9UPT6 1336 aa13.98□□□□□ -0.17
MRPS35-201ENST00000081029 PIGBQ92521 554 aa13.98□□□□□ -0.17
MRPS35-201ENST00000081029 GNAT3A8MTJ3 354 aa13.97□□□□□ -0.17
MRPS35-201ENST00000081029 PLSCR1O15162 318 aa13.97□□□□□ -0.17
MRPS35-201ENST00000081029 NFATC2IPQ8NCF5 419 aa13.97□□□□□ -0.17
MRPS35-201ENST00000081029 DOT1LQ8TEK3 1739 aa13.97□□□□□ -0.17
MRPS35-201ENST00000081029 TNS1Q9HBL0 1735 aaKnown RBP13.97□□□□□ -0.17
MRPS35-201ENST00000081029 KCNQ4P56696 695 aa13.97□□□□□ -0.17
MRPS35-201ENST00000081029 ERVV-2B6SEH9 535 aa13.96□□□□□ -0.17
MRPS35-201ENST00000081029 PLEKHF1Q96S99 279 aa13.96□□□□□ -0.17
MRPS35-201ENST00000081029 PLEKHG2Q9H7P9 1386 aa13.96□□□□□ -0.17
MRPS35-201ENST00000081029 RNMTO43148 476 aaKnown RBP13.95□□□□□ -0.18
MRPS35-201ENST00000081029 NEUROD2Q15784 382 aa13.95□□□□□ -0.18
MRPS35-201ENST00000081029 TXNRD1Q16881 649 aa13.95□□□□□ -0.18
MRPS35-201ENST00000081029 RTF1Q92541 710 aaKnown RBP13.95□□□□□ -0.18
MRPS35-201ENST00000081029 NHSQ6T4R5 1651 aa13.95□□□□□ -0.18
MRPS35-201ENST00000081029 PROM2Q8N271 834 aa13.95□□□□□ -0.18
MRPS35-201ENST00000081029 ASAP1Q9ULH1 1129 aa13.95□□□□□ -0.18
MRPS35-201ENST00000081029 KDM6AO15550 1401 aaPredicted RBP13.95□□□□□ -0.18
MRPS35-201ENST00000081029 MAP3K5Q99683 1374 aa13.94□□□□□ -0.18
MRPS35-201ENST00000081029 SENP3-EIF4A1A0A087X0R7 540 aa13.94□□□□□ -0.18
MRPS35-201ENST00000081029 DCTN1Q14203 1278 aa13.94□□□□□ -0.18
MRPS35-201ENST00000081029 MCM10Q7L590 875 aa13.94□□□□□ -0.18
MRPS35-201ENST00000081029 RRP7AQ9Y3A4 280 aaKnown RBP13.94□□□□□ -0.18
MRPS35-201ENST00000081029 BTAF1O14981 1849 aa13.94□□□□□ -0.18
MRPS35-201ENST00000081029 HNRNPUQ00839 825 aaKnown RBP eCLIP13.93□□□□□ -0.18
MRPS35-201ENST00000081029 IL17REQ8NFR9 667 aa13.93□□□□□ -0.18
MRPS35-201ENST00000081029 TEFQ10587 303 aa13.93□□□□□ -0.18
MRPS35-201ENST00000081029 TOGARAM1Q9Y4F4 1720 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms