RNA–Protein interactions for RNA: ENST00000053243.5

TNFRSF17-201, Transcript of TNF receptor superfamily member 17, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TNFRSF17, Length 994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF17-201ENST00000053243 REPIN1Q9BWE0 567 aaKnown RBP8.64□□□□□ -1.03
TNFRSF17-201ENST00000053243 FAM117AQ9C073 453 aa8.64□□□□□ -1.03
TNFRSF17-201ENST00000053243 SMG6Q86US8 1419 aaKnown RBP8.63□□□□□ -1.03
TNFRSF17-201ENST00000053243 YTHDC2Q9H6S0 1430 aaKnown RBP8.63□□□□□ -1.03
TNFRSF17-201ENST00000053243 ZNF142P52746 1687 aaPredicted RBP8.63□□□□□ -1.03
TNFRSF17-201ENST00000053243 SHPRHQ149N8 1683 aa8.63□□□□□ -1.03
TNFRSF17-201ENST00000053243 RIMS1Q86UR5 1692 aaKnown RBP8.63□□□□□ -1.03
TNFRSF17-201ENST00000053243 TTC13Q8NBP0 860 aa8.63□□□□□ -1.03
TNFRSF17-201ENST00000053243 TMUB1Q9BVT8 246 aa8.63□□□□□ -1.03
TNFRSF17-201ENST00000053243 PANK3Q9H999 370 aa8.63□□□□□ -1.03
TNFRSF17-201ENST00000053243 TSKSQ9UJT2 592 aa8.63□□□□□ -1.03
TNFRSF17-201ENST00000053243 ADGRB2O60241 1585 aa8.63□□□□□ -1.03
TNFRSF17-201ENST00000053243 DIP2AQ14689 1571 aa8.63□□□□□ -1.03
TNFRSF17-201ENST00000053243 TECPR2O15040 1411 aa8.63□□□□□ -1.03
TNFRSF17-201ENST00000053243 RIMS2Q9UQ26 1411 aa8.63□□□□□ -1.03
TNFRSF17-201ENST00000053243 NSD2O96028 1365 aa8.62□□□□□ -1.03
TNFRSF17-201ENST00000053243 ZMYM3Q14202 1370 aa8.62□□□□□ -1.03
TNFRSF17-201ENST00000053243 PLEKHG3A1L390 1219 aa8.62□□□□□ -1.03
TNFRSF17-201ENST00000053243 TRIM6-TRIM34B2RNG4 842 aa8.62□□□□□ -1.03
TNFRSF17-201ENST00000053243 FAM161AQ3B820 660 aa8.62□□□□□ -1.03
TNFRSF17-201ENST00000053243 ERICH6BQ5W0A0 696 aa8.62□□□□□ -1.03
TNFRSF17-201ENST00000053243 ADGRD1Q6QNK2 874 aa8.62□□□□□ -1.03
TNFRSF17-201ENST00000053243 TMC1Q8TDI8 760 aa8.62□□□□□ -1.03
TNFRSF17-201ENST00000053243 RBM27Q9P2N5 1060 aaKnown RBP8.62□□□□□ -1.03
TNFRSF17-201ENST00000053243 FAM198AQ9UFP1 575 aa8.62□□□□□ -1.03
TNFRSF17-201ENST00000053243 VPS9D1Q9Y2B5 631 aa8.62□□□□□ -1.03
TNFRSF17-201ENST00000053243 SLIT1O75093 1534 aa8.62□□□□□ -1.03
TNFRSF17-201ENST00000053243 AKAP12Q02952 1782 aa8.62□□□□□ -1.03
TNFRSF17-201ENST00000053243 MED14O60244 1454 aa8.62□□□□□ -1.03
TNFRSF17-201ENST00000053243 ITSN1Q15811 1721 aa8.61□□□□□ -1.03
TNFRSF17-201ENST00000053243 MON2Q7Z3U7 1717 aa8.61□□□□□ -1.03
TNFRSF17-201ENST00000053243 SLC4A5Q9BY07 1137 aa8.61□□□□□ -1.03
TNFRSF17-201ENST00000053243 KNSTRNQ9Y448 316 aa8.61□□□□□ -1.03
TNFRSF17-201ENST00000053243 SUPT16HQ9Y5B9 1047 aaKnown RBP8.61□□□□□ -1.03
TNFRSF17-201ENST00000053243 TNRQ92752 1358 aa8.61□□□□□ -1.03
TNFRSF17-201ENST00000053243 EVC2Q86UK5 1308 aa8.6□□□□□ -1.03
TNFRSF17-201ENST00000053243 TOPAZ1Q8N9V7 1692 aa8.6□□□□□ -1.03
TNFRSF17-201ENST00000053243 ARHGAP23Q9P227 1491 aa8.6□□□□□ -1.03
TNFRSF17-201ENST00000053243 TK2O00142 265 aa8.6□□□□□ -1.03
TNFRSF17-201ENST00000053243 FAM9BQ8IZU0 186 aa8.6□□□□□ -1.03
TNFRSF17-201ENST00000053243 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.6□□□□□ -1.03
TNFRSF17-201ENST00000053243 ATAD2Q6PL18 1390 aa8.6□□□□□ -1.03
TNFRSF17-201ENST00000053243 ANKRD36BQ8N2N9 1353 aa8.6□□□□□ -1.03
TNFRSF17-201ENST00000053243 NEFLP07196 543 aa8.59□□□□□ -1.03
TNFRSF17-201ENST00000053243 TTLL12Q14166 644 aaPredicted RBP8.59□□□□□ -1.03
TNFRSF17-201ENST00000053243 GIGYF2Q6Y7W6 1299 aaKnown RBP8.59□□□□□ -1.03
TNFRSF17-201ENST00000053243 KIAA1468Q9P260 1216 aa8.59□□□□□ -1.03
TNFRSF17-201ENST00000053243 ADGRG1Q9Y653 693 aa8.59□□□□□ -1.03
TNFRSF17-201ENST00000053243 FAM135BQ49AJ0 1406 aa8.59□□□□□ -1.03
TNFRSF17-201ENST00000053243 ABCC11Q96J66 1382 aa8.59□□□□□ -1.03
TNFRSF17-201ENST00000053243 ATP7BP35670 1465 aa8.58□□□□□ -1.04
TNFRSF17-201ENST00000053243 C3orf80F5H4A9 247 aa8.58□□□□□ -1.04
TNFRSF17-201ENST00000053243 MS4A1P11836 297 aa8.58□□□□□ -1.04
TNFRSF17-201ENST00000053243 FBXO31Q5XUX0 539 aaPredicted RBP8.58□□□□□ -1.04
TNFRSF17-201ENST00000053243 METTL3Q86U44 580 aaKnown RBP8.58□□□□□ -1.04
TNFRSF17-201ENST00000053243 DAXXQ9UER7 740 aaPredicted RBP8.58□□□□□ -1.04
TNFRSF17-201ENST00000053243 ADAMTSL3P82987 1691 aa8.58□□□□□ -1.04
TNFRSF17-201ENST00000053243 HDGFP51858 240 aaKnown RBP8.57□□□□□ -1.04
TNFRSF17-201ENST00000053243 PDE3BQ13370 1112 aa8.57□□□□□ -1.04
TNFRSF17-201ENST00000053243 PACS2Q86VP3 889 aa8.57□□□□□ -1.04
TNFRSF17-201ENST00000053243 PXYLP1Q8TE99 480 aa8.57□□□□□ -1.04
TNFRSF17-201ENST00000053243 SIRT1Q96EB6 747 aa8.57□□□□□ -1.04
TNFRSF17-201ENST00000053243 DDRGK1Q96HY6 314 aa8.57□□□□□ -1.04
TNFRSF17-201ENST00000053243 ESF1Q9H501 851 aaKnown RBP8.57□□□□□ -1.04
TNFRSF17-201ENST00000053243 RABGEF1Q9UJ41 708 aa8.57□□□□□ -1.04
TNFRSF17-201ENST00000053243 TRAK1Q9UPV9 953 aa8.57□□□□□ -1.04
TNFRSF17-201ENST00000053243 POLR3AO14802 1390 aaPredicted RBP8.57□□□□□ -1.04
TNFRSF17-201ENST00000053243 TMEM2Q9UHN6 1383 aa8.57□□□□□ -1.04
TNFRSF17-201ENST00000053243 XRN1Q8IZH2 1706 aaKnown RBP8.57□□□□□ -1.04
TNFRSF17-201ENST00000053243 NSD3Q9BZ95 1437 aa8.56□□□□□ -1.04
TNFRSF17-201ENST00000053243 NBPF26B4DH59 902 aa8.56□□□□□ -1.04
TNFRSF17-201ENST00000053243 HRO43593 1189 aa8.56□□□□□ -1.04
TNFRSF17-201ENST00000053243 ONECUT3O60422 494 aaPredicted RBP8.56□□□□□ -1.04
TNFRSF17-201ENST00000053243 OATP04181 439 aa8.56□□□□□ -1.04
TNFRSF17-201ENST00000053243 PPP2R1AP30153 589 aa8.56□□□□□ -1.04
TNFRSF17-201ENST00000053243 MDM2Q00987 491 aaPredicted RBP8.56□□□□□ -1.04
TNFRSF17-201ENST00000053243 NGEFQ8N5V2 710 aa8.56□□□□□ -1.04
TNFRSF17-201ENST00000053243 CDC42BPGQ6DT37 1551 aa8.56□□□□□ -1.04
TNFRSF17-201ENST00000053243 NRKQ7Z2Y5 1582 aa8.56□□□□□ -1.04
TNFRSF17-201ENST00000053243 RNF123Q5XPI4 1314 aa8.55□□□□□ -1.04
TNFRSF17-201ENST00000053243 BHMG1C9JSJ3 638 aaPredicted RBP8.55□□□□□ -1.04
TNFRSF17-201ENST00000053243 SMAPO00193 183 aa8.55□□□□□ -1.04
TNFRSF17-201ENST00000053243 CLCN1P35523 988 aa8.55□□□□□ -1.04
TNFRSF17-201ENST00000053243 TMEM132EQ6IEE7 984 aa8.55□□□□□ -1.04
TNFRSF17-201ENST00000053243 NUDT18Q6ZVK8 323 aa8.55□□□□□ -1.04
TNFRSF17-201ENST00000053243 NLRP7Q8WX94 980 aa8.55□□□□□ -1.04
TNFRSF17-201ENST00000053243 NBPF3Q9H094 633 aa8.55□□□□□ -1.04
TNFRSF17-201ENST00000053243 SEPT9Q9UHD8 586 aaPredicted RBP8.55□□□□□ -1.04
TNFRSF17-201ENST00000053243 PNMA3Q9UL41 463 aa8.55□□□□□ -1.04
TNFRSF17-201ENST00000053243 NUDCQ9Y266 331 aa8.55□□□□□ -1.04
TNFRSF17-201ENST00000053243 PLEKHG1Q9ULL1 1385 aa8.55□□□□□ -1.04
TNFRSF17-201ENST00000053243 CD163L1Q9NR16 1453 aa8.55□□□□□ -1.04
TNFRSF17-201ENST00000053243 CEP170BQ9Y4F5 1589 aaPredicted RBP8.55□□□□□ -1.04
TNFRSF17-201ENST00000053243 SETD1BQ9UPS6 1966 aaKnown RBP8.54□□□□□ -1.04
TNFRSF17-201ENST00000053243 CC2D1BQ5T0F9 858 aaKnown RBP8.54□□□□□ -1.04
TNFRSF17-201ENST00000053243 TATDN2Q93075 761 aa8.54□□□□□ -1.04
TNFRSF17-201ENST00000053243 CARD14Q9BXL6 1004 aa8.54□□□□□ -1.04
TNFRSF17-201ENST00000053243 GPCPD1Q9NPB8 672 aa8.54□□□□□ -1.04
TNFRSF17-201ENST00000053243 ADAMTS13Q76LX8 1427 aa8.54□□□□□ -1.04
TNFRSF17-201ENST00000053243 CGNL1Q0VF96 1302 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms