RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Cdkn1cP49919 348 aa10.92□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Cplx2P84086 134 aa10.92□□□□□ -0.66
Scn8a-213ENSMUST00000201549 AI481877A2ALV5 1481 aa10.91□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Prkar2bP31324 416 aa10.91□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Bcar3Q9QZK2 820 aa10.91□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Supt6hQ62383 1726 aaKnown RBP10.91□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Zbtb22Q9Z0G7 638 aa10.91□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Arhgef40Q3UPH7 1517 aa10.91□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Rasa1E9PYG6 1038 aa10.91□□□□□ -0.66
Scn8a-213ENSMUST00000201549 TmpoQ61033 693 aaKnown RBP10.91□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Zpr1Q62384 459 aa10.91□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Erbb3Q61526 1339 aa10.9□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Catsper2A2ARP9 588 aa10.9□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Klhdc4Q921I2 584 aa10.9□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Mctp1E9PV86 951 aa10.9□□□□□ -0.66
Scn8a-213ENSMUST00000201549 TnikP83510 1323 aa10.9□□□□□ -0.66
Scn8a-213ENSMUST00000201549 DroshaQ5HZJ0 1373 aaKnown RBP10.9□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Nkx1-2P42580 305 aa10.9□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Arhgef12Q8R4H2 1543 aaKnown RBP10.89□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Ak9G3UYQ4 1894 aa10.89□□□□□ -0.67
Scn8a-213ENSMUST00000201549 PxdnQ3UQ28 1475 aa10.89□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Cnnm1Q0GA42 951 aa10.89□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Nap1l2P51860 460 aa10.89□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Rbm27Q5SFM8 1060 aaKnown RBP10.89□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Cfap99A0A140LIX9 648 aa10.89□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Me1P06801 572 aa10.89□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Bag4Q8CI61 457 aa10.89□□□□□ -0.67
Scn8a-213ENSMUST00000201549 HnrnpmQ9D0E1 729 aaKnown RBP10.89□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Wdr63B2RY71 923 aa10.89□□□□□ -0.67
Scn8a-213ENSMUST00000201549 HmmrQ00547 794 aaKnown RBP10.89□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Wwc1Q5SXA9 1104 aa10.89□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Ppp4r3bQ922R5 820 aa10.89□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Trim30cD3YVI9 513 aa10.88□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Brf1Q8CFK2 676 aa10.88□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Gcc2Q8CHG3 1679 aa10.88□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Mcm3P25206 812 aaKnown RBP10.88□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Nop14Q8R3N1 860 aaKnown RBP10.88□□□□□ -0.67
Scn8a-213ENSMUST00000201549 CrcpO35427 148 aa10.88□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Ppp1r42Q8R1Z4 357 aa10.88□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Slc52a2Q9D8F3 450 aa10.88□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Nup88Q8CEC0 753 aaKnown RBP10.87□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Rcan3Q9JKK0 239 aa10.87□□□□□ -0.67
Scn8a-213ENSMUST00000201549 TchpQ3TVW5 497 aa10.87□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Evc2Q8K1G2 1220 aa10.87□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Tshz3Q8CGV9 1081 aa10.87□□□□□ -0.67
Scn8a-213ENSMUST00000201549 UvssaQ9D479 717 aa10.87□□□□□ -0.67
Scn8a-213ENSMUST00000201549 KdrP35918 1367 aa10.87□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Pla2r1Q62028 1487 aa10.87□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Top1mtQ8R4U6 593 aa10.87□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Med4Q9CQA5 270 aa10.87□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Naip6Q9JIB6 1403 aa10.87□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Ppp1r15aP17564 657 aa10.87□□□□□ -0.67
Scn8a-213ENSMUST00000201549 ImpactO55091 318 aa10.86□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Mapkbp1Q6NS57 1503 aa10.86□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Anp32eP97822 260 aaKnown RBP10.86□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Zranb3Q6NZP1 1069 aa10.86□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Ddx54Q8K4L0 874 aaKnown RBP10.86□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Kdm3bQ6ZPY7 1562 aa10.86□□□□□ -0.67
Scn8a-213ENSMUST00000201549 AU019823E9PUQ3 292 aa10.86□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Kif21aQ9QXL2 1672 aa10.86□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Trim55G3X8Y1 545 aa10.85□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Krt85Q9Z2T6 507 aa10.85□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Znhit6Q3UFB2 460 aaKnown RBP10.85□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Cbx1P83917 185 aaKnown RBP10.85□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Btbd11Q6GQW0 1109 aa10.85□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Ssh2Q5SW75 1423 aa10.85□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Gjb2Q00977 226 aa10.85□□□□□ -0.67
Scn8a-213ENSMUST00000201549 4931400O07RikQ9D4M5 137 aa10.85□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Homer1Q9Z2Y3 366 aa10.85□□□□□ -0.67
Scn8a-213ENSMUST00000201549 GlmnQ8BZM1 596 aa10.85□□□□□ -0.67
Scn8a-213ENSMUST00000201549 FanclQ9CR14 375 aa10.85□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Pprc1Q6NZN1 1644 aa10.85□□□□□ -0.67
Scn8a-213ENSMUST00000201549 TefQ9JLC6 301 aa10.85□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Trappc8E9PWG2 1437 aa10.85□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Stk38Q91VJ4 465 aa10.84□□□□□ -0.67
Scn8a-213ENSMUST00000201549 EvcP57680 1005 aa10.84□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Mns1Q61884 491 aa10.84□□□□□ -0.67
Scn8a-213ENSMUST00000201549 DmtnQ9WV69 405 aa10.84□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Ccdc34Q3UI66 367 aa10.84□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Ankrd44B2RXR6 993 aa10.84□□□□□ -0.67
Scn8a-213ENSMUST00000201549 Kdm2bQ6P1G2 1309 aa10.83□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Fancd2Q80V62 1450 aa10.83□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Gcom1E9PZ54 550 aa10.83□□□□□ -0.68
Scn8a-213ENSMUST00000201549 MyzapQ3UIJ9 466 aa10.83□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Pmfbp1Q9WVQ0 1022 aa10.83□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Zhx1P70121 873 aa10.83□□□□□ -0.68
Scn8a-213ENSMUST00000201549 CalcaP70160 136 aa10.83□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Cers3Q1A3B0 383 aa10.83□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Kdm5bQ80Y84 1544 aa10.83□□□□□ -0.68
Scn8a-213ENSMUST00000201549 PdiltQ9DAN1 588 aa10.82□□□□□ -0.68
Scn8a-213ENSMUST00000201549 NefhP19246 1090 aa10.82□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Fsd1Q7TPM6 496 aa10.82□□□□□ -0.68
Scn8a-213ENSMUST00000201549 PsapQ61207 557 aaKnown RBP10.82□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Cep57l1Q8VDS7 400 aa10.82□□□□□ -0.68
Scn8a-213ENSMUST00000201549 A0A1L1SQF0 893 aa10.82□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Sos1Q62245 1319 aa10.82□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Atp10dQ8K2X1 1416 aa10.81□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Atf7ipQ7TT18 1306 aa10.81□□□□□ -0.68
Scn8a-213ENSMUST00000201549 NcapgE9PWG6 1004 aa10.81□□□□□ -0.68
Scn8a-213ENSMUST00000201549 ItpripQ3TNL8 555 aa10.81□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 9.9 ms