RNA–Protein interactions for RNA: ENSMUST00000169486.8

Ebf3-204, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ebf3, Length 4,994 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-204ENSMUST00000169486 Ccar2Q8VDP4 922 aaKnown RBP20.37■□□□□ 0.85
Ebf3-204ENSMUST00000169486 Adcy5P84309 1262 aa20.36■□□□□ 0.85
Ebf3-204ENSMUST00000169486 MicalclQ9D5U9 680 aa20.36■□□□□ 0.85
Ebf3-204ENSMUST00000169486 Rbm27Q5SFM8 1060 aaKnown RBP20.36■□□□□ 0.85
Ebf3-204ENSMUST00000169486 EvcP57680 1005 aa20.36■□□□□ 0.85
Ebf3-204ENSMUST00000169486 Spty2d1Q68FG3 682 aa20.36■□□□□ 0.85
Ebf3-204ENSMUST00000169486 Neo1P97798 1493 aa20.35■□□□□ 0.85
Ebf3-204ENSMUST00000169486 Polr3aB2RXC6 1390 aa20.35■□□□□ 0.85
Ebf3-204ENSMUST00000169486 Fam13aQ8BGI4 693 aa20.35■□□□□ 0.85
Ebf3-204ENSMUST00000169486 Gigyf1Q99MR1 1044 aaKnown RBP20.35■□□□□ 0.85
Ebf3-204ENSMUST00000169486 Bcar3Q9QZK2 820 aa20.35■□□□□ 0.85
Ebf3-204ENSMUST00000169486 Wdr63B2RY71 923 aa20.35■□□□□ 0.85
Ebf3-204ENSMUST00000169486 Fsd2Q8BZ52 692 aa20.34■□□□□ 0.85
Ebf3-204ENSMUST00000169486 Slc26a8Q8R0C3 999 aa20.34■□□□□ 0.85
Ebf3-204ENSMUST00000169486 Magi1Q6RHR9 1471 aa20.34■□□□□ 0.85
Ebf3-204ENSMUST00000169486 Zpr1Q62384 459 aa20.34■□□□□ 0.85
Ebf3-204ENSMUST00000169486 Rnf187Q8BFX1 236 aa20.34■□□□□ 0.85
Ebf3-204ENSMUST00000169486 Gm1043A0A140LJC2 1431 aa20.34■□□□□ 0.85
Ebf3-204ENSMUST00000169486 Catsper2A2ARP9 588 aa20.34■□□□□ 0.85
Ebf3-204ENSMUST00000169486 Kdm4aQ8BW72 1064 aa20.34■□□□□ 0.85
Ebf3-204ENSMUST00000169486 Gps2Q921N8 327 aa20.34■□□□□ 0.85
Ebf3-204ENSMUST00000169486 Smg7Q5RJH6 1138 aaKnown RBP20.33■□□□□ 0.85
Ebf3-204ENSMUST00000169486 Jakmip2D3YXK0 820 aa20.33■□□□□ 0.85
Ebf3-204ENSMUST00000169486 Lrrcc1Q69ZB0 1026 aa20.33■□□□□ 0.85
Ebf3-204ENSMUST00000169486 Commd10Q8JZY2 202 aa20.33■□□□□ 0.85
Ebf3-204ENSMUST00000169486 Ddx19aQ61655 478 aaKnown RBP20.33■□□□□ 0.84
Ebf3-204ENSMUST00000169486 Tshz3Q8CGV9 1081 aa20.33■□□□□ 0.84
Ebf3-204ENSMUST00000169486 Serpina10Q8R121 448 aa20.33■□□□□ 0.84
Ebf3-204ENSMUST00000169486 Rprd2Q6NXI6 1469 aaKnown RBP20.32■□□□□ 0.84
Ebf3-204ENSMUST00000169486 Duxf3A0A0N4SV92 674 aa20.32■□□□□ 0.84
Ebf3-204ENSMUST00000169486 Zkscan7E9PVW1 718 aa20.32■□□□□ 0.84
Ebf3-204ENSMUST00000169486 Rufy2Q8R4C2 606 aa20.32■□□□□ 0.84
Ebf3-204ENSMUST00000169486 ZwintQ9CQU5 252 aa20.32■□□□□ 0.84
Ebf3-204ENSMUST00000169486 NexmifQ5DTT1 1515 aa20.32■□□□□ 0.84
Ebf3-204ENSMUST00000169486 Pip4k2aO70172 405 aa20.32■□□□□ 0.84
Ebf3-204ENSMUST00000169486 Ccdc181Q80ZU5 509 aa20.32■□□□□ 0.84
Ebf3-204ENSMUST00000169486 Cct4P80315 539 aaKnown RBP20.31■□□□□ 0.84
Ebf3-204ENSMUST00000169486 Ehmt1Q5DW34 1296 aa20.31■□□□□ 0.84
Ebf3-204ENSMUST00000169486 Pdcl2Q78Y63 240 aa20.31■□□□□ 0.84
Ebf3-204ENSMUST00000169486 Sass6Q80UK7 654 aa20.31■□□□□ 0.84
Ebf3-204ENSMUST00000169486 Slc52a2Q9D8F3 450 aa20.31■□□□□ 0.84
Ebf3-204ENSMUST00000169486 Sel1lQ9Z2G6 790 aa20.31■□□□□ 0.84
Ebf3-204ENSMUST00000169486 NinlQ6ZQ12 1394 aa20.31■□□□□ 0.84
Ebf3-204ENSMUST00000169486 CalrP14211 416 aaKnown RBP20.31■□□□□ 0.84
Ebf3-204ENSMUST00000169486 Ccdc66Q6NS45 935 aa20.31■□□□□ 0.84
Ebf3-204ENSMUST00000169486 Afap1Q80YS6 731 aa20.31■□□□□ 0.84
Ebf3-204ENSMUST00000169486 Ccdc96Q9CR92 584 aa20.31■□□□□ 0.84
Ebf3-204ENSMUST00000169486 Pcf11G3X9Z4 1553 aa20.3■□□□□ 0.84
Ebf3-204ENSMUST00000169486 Anapc15-psA0A140T8L6 141 aa20.3■□□□□ 0.84
Ebf3-204ENSMUST00000169486 Ccdc178Q8CDV0 866 aa20.3■□□□□ 0.84
Ebf3-204ENSMUST00000169486 Ttc19Q8CC21 365 aa20.3■□□□□ 0.84
Ebf3-204ENSMUST00000169486 Mmel1Q9JLI3 765 aa20.3■□□□□ 0.84
Ebf3-204ENSMUST00000169486 Stim1P70302 685 aa20.3■□□□□ 0.84
Ebf3-204ENSMUST00000169486 Erc1Q99MI1 1120 aa20.3■□□□□ 0.84
Ebf3-204ENSMUST00000169486 TnikP83510 1323 aa20.3■□□□□ 0.84
Ebf3-204ENSMUST00000169486 Pafah1b1P63005 410 aaKnown RBP20.29■□□□□ 0.84
Ebf3-204ENSMUST00000169486 Aplp1Q03157 653 aa20.29■□□□□ 0.84
Ebf3-204ENSMUST00000169486 Slc12a5Q91V14 1138 aa20.29■□□□□ 0.84
Ebf3-204ENSMUST00000169486 Map9Q3TRR0 646 aa20.29■□□□□ 0.84
Ebf3-204ENSMUST00000169486 Cdkl5Q3UTQ8 938 aa20.29■□□□□ 0.84
Ebf3-204ENSMUST00000169486 Dnajc5bQ9CQ94 199 aa20.29■□□□□ 0.84
Ebf3-204ENSMUST00000169486 Cfap45Q9D9U9 551 aa20.29■□□□□ 0.84
Ebf3-204ENSMUST00000169486 Uri1Q3TLD5 531 aa20.29■□□□□ 0.84
Ebf3-204ENSMUST00000169486 Stx6Q9JKK1 255 aa20.29■□□□□ 0.84
Ebf3-204ENSMUST00000169486 Strn4P58404 760 aa20.28■□□□□ 0.84
Ebf3-204ENSMUST00000169486 Erich4Q3UNU4 136 aa20.28■□□□□ 0.84
Ebf3-204ENSMUST00000169486 Btbd11Q6GQW0 1109 aa20.28■□□□□ 0.84
Ebf3-204ENSMUST00000169486 Sirt1Q923E4 737 aa20.27■□□□□ 0.84
Ebf3-204ENSMUST00000169486 Prl7d1P04769 244 aa20.27■□□□□ 0.84
Ebf3-204ENSMUST00000169486 Uspl1Q3ULM6 1089 aa20.27■□□□□ 0.84
Ebf3-204ENSMUST00000169486 Ankrd44B2RXR6 993 aa20.27■□□□□ 0.84
Ebf3-204ENSMUST00000169486 Ppp1r15aP17564 657 aa20.27■□□□□ 0.84
Ebf3-204ENSMUST00000169486 HnrnpmQ9D0E1 729 aaKnown RBP20.27■□□□□ 0.84
Ebf3-204ENSMUST00000169486 Cep89Q9CZX2 791 aa20.27■□□□□ 0.83
Ebf3-204ENSMUST00000169486 KdrP35918 1367 aa20.27■□□□□ 0.83
Ebf3-204ENSMUST00000169486 Krt84Q99M73 603 aa20.26■□□□□ 0.83
Ebf3-204ENSMUST00000169486 Zscan20B2KFW1 1030 aa20.26■□□□□ 0.83
Ebf3-204ENSMUST00000169486 Iqca1Q9CUL5 857 aa20.26■□□□□ 0.83
Ebf3-204ENSMUST00000169486 Stxbp4Q9WV89 557 aa20.26■□□□□ 0.83
Ebf3-204ENSMUST00000169486 Egfem1Q8C088 590 aa20.25■□□□□ 0.83
Ebf3-204ENSMUST00000169486 Gm42641I6L9G2 585 aa20.25■□□□□ 0.83
Ebf3-204ENSMUST00000169486 AtripQ8BMG1 785 aa20.25■□□□□ 0.83
Ebf3-204ENSMUST00000169486 Luc7lQ9CYI4 371 aaKnown RBP20.25■□□□□ 0.83
Ebf3-204ENSMUST00000169486 Paxbp1P58501 919 aa20.25■□□□□ 0.83
Ebf3-204ENSMUST00000169486 Ccdc83Q9D4V3 305 aa20.24■□□□□ 0.83
Ebf3-204ENSMUST00000169486 Atf3Q60765 181 aa20.24■□□□□ 0.83
Ebf3-204ENSMUST00000169486 ImmtQ8CAQ8 757 aaKnown RBP20.24■□□□□ 0.83
Ebf3-204ENSMUST00000169486 Gsdma2Q32M21 443 aa20.24■□□□□ 0.83
Ebf3-204ENSMUST00000169486 AidaQ8C4Q6 305 aa20.24■□□□□ 0.83
Ebf3-204ENSMUST00000169486 Ttc21bQ0HA38 1315 aa20.24■□□□□ 0.83
Ebf3-204ENSMUST00000169486 Ube2hP62257 183 aa20.24■□□□□ 0.83
Ebf3-204ENSMUST00000169486 Maats1Q8BRC6 783 aa20.24■□□□□ 0.83
Ebf3-204ENSMUST00000169486 Rrs1Q9CYH6 365 aaKnown RBP20.23■□□□□ 0.83
Ebf3-204ENSMUST00000169486 Cyp26c1B2RXA7 518 aa20.23■□□□□ 0.83
Ebf3-204ENSMUST00000169486 Ppp4r3bQ922R5 820 aa20.23■□□□□ 0.83
Ebf3-204ENSMUST00000169486 Gm7361D3Z6R1 267 aa20.23■□□□□ 0.83
Ebf3-204ENSMUST00000169486 Bin1O08539 588 aaKnown RBP20.23■□□□□ 0.83
Ebf3-204ENSMUST00000169486 Luzp1Q8R4U7 1068 aaKnown RBP20.22■□□□□ 0.83
Ebf3-204ENSMUST00000169486 Themis2Q91YX0 663 aa20.22■□□□□ 0.83
Ebf3-204ENSMUST00000169486 Ccdc39Q9D5Y1 937 aa20.22■□□□□ 0.83
Retrieved 100 of 22,080 RNA–protein pairs in 12.3 ms