RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Paxbp1P58501 919 aa10.84□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Ccdc42Q5SV66 316 aa10.84□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Frat2Q8K025 231 aa10.84□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Mxra7Q9CZH7 178 aa10.84□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Cep57l1Q8VDS7 400 aa10.83□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Cabp1Q9JLK7 227 aa10.83□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Wdr33Q8K4P0 1330 aaKnown RBP10.83□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Nsrp1Q5NCR9 542 aa10.83□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Nek5Q7TSC3 627 aa10.83□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Ccdc158Q8CDI6 1109 aa10.83□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Nol8Q3UHX0 1147 aaKnown RBP10.83□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Tacc1Q6Y685 774 aa10.83□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Cbfa2t2O70374 594 aa10.83□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Specc1lQ2KN98 1118 aaKnown RBP10.83□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Syce3B5KM66 88 aa10.83□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Esx1O88933 382 aa10.83□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Smarcad1Q04692 1021 aa10.83□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Fam107bQ3TGF2 131 aa10.83□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Tacc3Q9JJ11 631 aa10.83□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Kiaa1211Q5PR69 1207 aa10.82□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Ccdc30Q8BVF4 654 aa10.82□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Swt1Q9DBQ9 907 aa10.82□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Washc2Q6PGL7 1334 aa10.82□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Cttnbp2B9EJA2 1648 aa10.82□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Mtus1Q5HZI1 1210 aa10.82□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Bank1Q80VH0 783 aa10.82□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Jakmip1Q8BVL9 626 aa10.82□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Spty2d1Q68FG3 682 aa10.82□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Fsd2Q8BZ52 692 aa10.82□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Wasf1Q8R5H6 559 aa10.82□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Znf394Q9Z1D9 521 aa10.82□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Gnai2P08752 355 aaKnown RBP10.82□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Ell2Q3UKU1 639 aa10.82□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Spa17Q62252 149 aa10.82□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Usp40Q8BWR4 1235 aa10.82□□□□□ -0.68
Col6a5-201ENSMUST00000165165 TefQ9JLC6 301 aa10.82□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Plekhh1Q80TI1 1356 aa10.82□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Usp47Q8BY87 1376 aa10.82□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Mybbp1aQ7TPV4 1344 aaKnown RBP10.82□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Hdhd2Q3UGR5 259 aa10.82□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Igf2bp2Q5SF07 592 aaKnown RBP10.82□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Ccdc174Q3U155 467 aa10.81□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Hook3Q8BUK6 718 aa10.81□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Hs1bp3Q3TC93 395 aa10.81□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Krt84Q99M73 603 aa10.81□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Cdca7Q9D0M2 382 aa10.81□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Mink1Q9JM52 1308 aa10.81□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Dhx57Q6P5D3 1388 aaKnown RBP10.81□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Neurog2P70447 263 aa10.81□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Zrsr1Q64707 428 aa10.81□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Abcf1Q6P542 837 aaKnown RBP10.81□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Ccdc93Q7TQK5 629 aa10.81□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Prkrip1Q9CWV6 186 aaKnown RBP10.81□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Apol7aB2RT54 418 aa10.81□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Diaph1O08808 1255 aa10.81□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Ccdc150Q8CDI7 1110 aa10.81□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Map7d1A2AJI0 846 aa10.81□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Ttll13A4Q9F6 804 aa10.81□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Smarca2Q6DIC0 1577 aa10.81□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Zhx1P70121 873 aa10.8□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Ddx10Q80Y44 875 aaKnown RBP10.8□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Apbb1ipQ8R5A3 670 aa10.8□□□□□ -0.68
Col6a5-201ENSMUST00000165165 HypkQ9CR41 129 aa10.8□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Sh2d4bA6X942 431 aa10.8□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Dnajc2P54103 621 aaKnown RBP10.8□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Gas8Q60779 478 aa10.8□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Usp11Q99K46 921 aa10.8□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Wdr63B2RY71 923 aa10.8□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Kcnn1Q9EQR3 537 aa10.8□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Rbm19Q8R3C6 952 aaKnown RBP10.8□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Smarcc1P97496 1104 aa10.79□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Vgll3P85442 326 aa10.79□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Calml4Q91WQ9 153 aa10.79□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Clul1Q3ZRW6 464 aa10.79□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Skida1Q80YR3 822 aa10.79□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Matr3Q8K310 846 aaKnown RBP10.79□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Znf692Q3U381 531 aa10.79□□□□□ -0.68
Col6a5-201ENSMUST00000165165 GlmnQ8BZM1 596 aa10.79□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Mkrn1Q9QXP6 481 aa10.79□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Cep120Q7TSG1 988 aa10.79□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Ssx2ipQ8VC66 615 aa10.79□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Krt7Q9DCV7 457 aa10.79□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Ccdc171E9Q1U1 1324 aa10.79□□□□□ -0.68
Col6a5-201ENSMUST00000165165 UacaQ8CGB3 1411 aa10.79□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Mcm3P25206 812 aaKnown RBP10.78□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Smco2Q9DA21 347 aa10.78□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Stxbp4Q9WV89 557 aa10.78□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Usp35M0QWN7 1009 aa10.78□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Ankrd49Q8VE42 238 aa10.78□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Pdcl2Q78Y63 240 aa10.78□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Fam13aQ8BGI4 693 aa10.78□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Gcc1Q9D4H2 778 aa10.78□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Uso1Q9Z1Z0 959 aaKnown RBP10.78□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Pds5bQ4VA53 1446 aaKnown RBP10.78□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Ddx58Q6Q899 926 aa10.78□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Pms1Q8K119 917 aa10.78□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Caprin2Q05A80 1031 aaKnown RBP10.77□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Shq1Q7TMX5 569 aa10.77□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Sec62Q8BU14 398 aaKnown RBP10.77□□□□□ -0.68
Col6a5-201ENSMUST00000165165 Nphp1Q9QY53 687 aa10.77□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 87 ms