RNA–Protein interactions for RNA: ENSMUST00000113054.8

Shroom3-202, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-202ENSMUST00000113054 Matr3Q8K310 846 aaKnown RBP17.08■□□□□ 0.32
Shroom3-202ENSMUST00000113054 Krt85Q9Z2T6 507 aa17.08■□□□□ 0.32
Shroom3-202ENSMUST00000113054 Ccdc141E9Q8Q6 1531 aa17.08■□□□□ 0.32
Shroom3-202ENSMUST00000113054 TnikP83510 1323 aa17.08■□□□□ 0.32
Shroom3-202ENSMUST00000113054 Zkscan1Q8BGS3 561 aaKnown RBP17.08■□□□□ 0.32
Shroom3-202ENSMUST00000113054 CarsQ9ER72 831 aaKnown RBP17.08■□□□□ 0.32
Shroom3-202ENSMUST00000113054 Maco1Q7TQE6 664 aaKnown RBP17.07■□□□□ 0.32
Shroom3-202ENSMUST00000113054 Chaf1aQ9QWF0 911 aa17.07■□□□□ 0.32
Shroom3-202ENSMUST00000113054 Rufy2Q8R4C2 606 aa17.07■□□□□ 0.32
Shroom3-202ENSMUST00000113054 Dctn1O08788 1281 aa17.07■□□□□ 0.32
Shroom3-202ENSMUST00000113054 Znf131Q8K3J5 619 aa17.07■□□□□ 0.32
Shroom3-202ENSMUST00000113054 Rbm19Q8R3C6 952 aaKnown RBP17.07■□□□□ 0.32
Shroom3-202ENSMUST00000113054 Myom3A2ABU4 1439 aa17.07■□□□□ 0.32
Shroom3-202ENSMUST00000113054 Rhot2Q8JZN7 620 aa17.07■□□□□ 0.32
Shroom3-202ENSMUST00000113054 Ccne1Q61457 408 aa17.06■□□□□ 0.32
Shroom3-202ENSMUST00000113054 Mipol1Q9D9F8 279 aa17.06■□□□□ 0.32
Shroom3-202ENSMUST00000113054 Cdkn1cP49919 348 aa17.06■□□□□ 0.32
Shroom3-202ENSMUST00000113054 Ccdc39Q9D5Y1 937 aa17.06■□□□□ 0.32
Shroom3-202ENSMUST00000113054 NsmfQ99NF2 532 aa17.06■□□□□ 0.32
Shroom3-202ENSMUST00000113054 Ppfia3P60469 1194 aa17.06■□□□□ 0.32
Shroom3-202ENSMUST00000113054 Erlin2Q8BFZ9 340 aa17.06■□□□□ 0.32
Shroom3-202ENSMUST00000113054 Nup88Q8CEC0 753 aaKnown RBP17.06■□□□□ 0.32
Shroom3-202ENSMUST00000113054 GptQ8QZR5 496 aa17.05■□□□□ 0.32
Shroom3-202ENSMUST00000113054 Dph6Q9CQ28 267 aa17.05■□□□□ 0.32
Shroom3-202ENSMUST00000113054 Psmd1Q3TXS7 953 aa17.05■□□□□ 0.32
Shroom3-202ENSMUST00000113054 Sall3Q62255 1320 aa17.05■□□□□ 0.32
Shroom3-202ENSMUST00000113054 Rbm26Q6NZN0 1012 aaKnown RBP17.05■□□□□ 0.32
Shroom3-202ENSMUST00000113054 Pof1bQ8K4L4 587 aa17.05■□□□□ 0.32
Shroom3-202ENSMUST00000113054 Gnl2Q99LH1 728 aaKnown RBP17.05■□□□□ 0.32
Shroom3-202ENSMUST00000113054 Cdkl5Q3UTQ8 938 aa17.04■□□□□ 0.32
Shroom3-202ENSMUST00000113054 Fgd6Q69ZL1 1399 aa17.04■□□□□ 0.32
Shroom3-202ENSMUST00000113054 Duox2A2AQ99 1517 aa17.04■□□□□ 0.32
Shroom3-202ENSMUST00000113054 Vps8Q0P5W1 1427 aa17.04■□□□□ 0.32
Shroom3-202ENSMUST00000113054 MvpQ9EQK5 861 aa17.04■□□□□ 0.32
Shroom3-202ENSMUST00000113054 Cep131Q62036 1060 aa17.03■□□□□ 0.32
Shroom3-202ENSMUST00000113054 Pip4k2aO70172 405 aa17.03■□□□□ 0.32
Shroom3-202ENSMUST00000113054 Top2aQ01320 1528 aaKnown RBP17.03■□□□□ 0.32
Shroom3-202ENSMUST00000113054 Gas2l3Q3UWW6 683 aa17.03■□□□□ 0.32
Shroom3-202ENSMUST00000113054 Zbtb3Q91X45 518 aa17.03■□□□□ 0.32
Shroom3-202ENSMUST00000113054 Tut1Q8R3F9 869 aa17.03■□□□□ 0.32
Shroom3-202ENSMUST00000113054 ImmtQ8CAQ8 757 aaKnown RBP17.03■□□□□ 0.32
Shroom3-202ENSMUST00000113054 Atxn3Q9CVD2 355 aa17.03■□□□□ 0.32
Shroom3-202ENSMUST00000113054 Zbtb22Q9Z0G7 638 aa17.03■□□□□ 0.32
Shroom3-202ENSMUST00000113054 Ca8P28651 291 aa17.02■□□□□ 0.32
Shroom3-202ENSMUST00000113054 Cacna2d4Q5RJF7 1116 aa17.02■□□□□ 0.32
Shroom3-202ENSMUST00000113054 Tspyl2Q7TQI8 677 aa17.02■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Gm14025A2AP89 1413 aa17.02■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Mcm10Q0VBD2 885 aa17.02■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Fam170aQ66LM6 333 aa17.02■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Ccdc181Q80ZU5 509 aa17.01■□□□□ 0.31
Shroom3-202ENSMUST00000113054 NapbP28663 298 aa17.01■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Znf18Q810A1 556 aa17.01■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Riok1Q922Q2 567 aa17.01■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Pet2A2AHY8 747 aa17.01■□□□□ 0.31
Shroom3-202ENSMUST00000113054 2310002L09RikQ9D7L5 217 aa17.01■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Nfxl1E9Q8I7 918 aaKnown RBP17.01■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Ifit1bl2Q3U687 466 aa17.01■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Gimap5Q8BWF2 308 aa17.01■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Cep57l1Q8VDS7 400 aa17.01■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Adck5Q80V03 582 aa17■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Nop14Q8R3N1 860 aaKnown RBP17■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Ccdc102aQ3TMW1 549 aa17■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Arid3aQ62431 601 aa17■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Slf2Q6P9P0 1278 aa17■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Tmx4Q8C0L0 335 aa17■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Sh3d21Q7TSG5 549 aa16.99■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Luc7lQ9CYI4 371 aaKnown RBP16.99■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Kcnh5Q920E3 988 aa16.99■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Jmjd4Q8BFT6 427 aa16.99■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Efcab5A0JP43 1406 aa16.99■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Cep55Q8BT07 462 aa16.98■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Lmbr1Q9JIT0 490 aa16.98■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Cct2P80314 535 aaKnown RBP16.98■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Ccdc172Q810N9 267 aa16.98■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Atp2b1G5E829 1220 aa16.98■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Cc2d1bQ8BRN9 848 aa16.98■□□□□ 0.31
Shroom3-202ENSMUST00000113054 IbtkQ6ZPR6 1352 aaKnown RBP16.98■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Cyp7a1Q64505 503 aa16.97■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Tmem67Q8BR76 992 aa16.97■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Il1rapl2Q9ERS6 686 aa16.97■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Igflr1Q3U4N7 345 aa16.97■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Ppp1r42Q8R1Z4 357 aa16.97■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Slc14a2Q8R4T9 930 aa16.97■□□□□ 0.31
Shroom3-202ENSMUST00000113054 CastP51125 788 aa16.97■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Soga3Q6NZL0 945 aa16.97■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Ercc6lQ8BHK9 1240 aa16.97■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Fchsd2Q3USJ8 740 aa16.96■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Larp6Q8BN59 492 aa16.96■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Cfap58B2RW38 873 aa16.96■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Trim25Q61510 634 aaKnown RBP16.96■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Wasf1Q8R5H6 559 aa16.96■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Knop1Q9Z2Q2 478 aaKnown RBP16.96■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Exoc5Q3TPX4 708 aa16.96■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Gbp4Q61107 620 aa16.96■□□□□ 0.31
Shroom3-202ENSMUST00000113054 Ano8Q6PB70 1060 aa16.95■□□□□ 0.3
Shroom3-202ENSMUST00000113054 Arhgef18Q6P9R4 1021 aa16.95■□□□□ 0.3
Shroom3-202ENSMUST00000113054 Lman1Q9D0F3 517 aa16.95■□□□□ 0.3
Shroom3-202ENSMUST00000113054 Homer1Q9Z2Y3 366 aa16.95■□□□□ 0.3
Shroom3-202ENSMUST00000113054 Bag3Q9JLV1 577 aaKnown RBP16.95■□□□□ 0.3
Shroom3-202ENSMUST00000113054 Tax1bp1Q3UKC1 814 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms