RNA–Protein interactions for RNA: ENSMUST00000111438.1

Ddx55-202, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

TSL 2 BASIC

Gene Ddx55, Length 2,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-202ENSMUST00000111438 MypopQ8R4U1 393 aa15.95■□□□□ 0.14
Ddx55-202ENSMUST00000111438 Zpr1Q62384 459 aa15.94■□□□□ 0.14
Ddx55-202ENSMUST00000111438 Fnbp4Q6ZQ03 1031 aa15.94■□□□□ 0.14
Ddx55-202ENSMUST00000111438 ThemisQ8BGW0 636 aa15.94■□□□□ 0.14
Ddx55-202ENSMUST00000111438 Cypt2Q6P924 180 aa15.94■□□□□ 0.14
Ddx55-202ENSMUST00000111438 Pak3Q61036 559 aa15.93■□□□□ 0.14
Ddx55-202ENSMUST00000111438 Aox2Q5SGK3 1345 aa15.92■□□□□ 0.14
Ddx55-202ENSMUST00000111438 Calr4Q3TQS0 420 aa15.91■□□□□ 0.14
Ddx55-202ENSMUST00000111438 Cc2d1aQ8K1A6 943 aa15.91■□□□□ 0.14
Ddx55-202ENSMUST00000111438 Ttc41Q692V3 1318 aa15.91■□□□□ 0.14
Ddx55-202ENSMUST00000111438 Ttc21aQ8C0S4 1314 aa15.91■□□□□ 0.14
Ddx55-202ENSMUST00000111438 PappaQ8R4K8 1624 aa15.91■□□□□ 0.14
Ddx55-202ENSMUST00000111438 Ubr2Q6WKZ8 1755 aa15.91■□□□□ 0.14
Ddx55-202ENSMUST00000111438 Ccdc129Q14B48 1034 aa15.9■□□□□ 0.14
Ddx55-202ENSMUST00000111438 Ankrd50F7BE84 1390 aa15.9■□□□□ 0.14
Ddx55-202ENSMUST00000111438 Psrc1Q9D0P7 329 aa15.9■□□□□ 0.14
Ddx55-202ENSMUST00000111438 Abcc12Q80WJ6 1366 aa15.9■□□□□ 0.14
Ddx55-202ENSMUST00000111438 4930572O03RikQ8C5Y0 211 aa15.89■□□□□ 0.13
Ddx55-202ENSMUST00000111438 Kank1E9Q238 1360 aa15.89■□□□□ 0.13
Ddx55-202ENSMUST00000111438 Nwd2Q6P5U7 1742 aa15.89■□□□□ 0.13
Ddx55-202ENSMUST00000111438 Snap23O09044 210 aa15.89■□□□□ 0.13
Ddx55-202ENSMUST00000111438 Ltbp1Q8CG19 1712 aa15.88■□□□□ 0.13
Ddx55-202ENSMUST00000111438 Mst1rQ62190 1378 aa15.88■□□□□ 0.13
Ddx55-202ENSMUST00000111438 Gas2l2Q5SSG4 860 aa15.88■□□□□ 0.13
Ddx55-202ENSMUST00000111438 Sos1Q62245 1319 aa15.88■□□□□ 0.13
Ddx55-202ENSMUST00000111438 Fam50bQ9WTJ8 334 aa15.88■□□□□ 0.13
Ddx55-202ENSMUST00000111438 Rtf1A2AQ19 715 aaKnown RBP15.87■□□□□ 0.13
Ddx55-202ENSMUST00000111438 InhbeO08717 350 aa15.87■□□□□ 0.13
Ddx55-202ENSMUST00000111438 Pm20d1Q8C165 503 aa15.87■□□□□ 0.13
Ddx55-202ENSMUST00000111438 Plekhh1Q80TI1 1356 aa15.86■□□□□ 0.13
Ddx55-202ENSMUST00000111438 L3mbtl2P59178 703 aa15.86■□□□□ 0.13
Ddx55-202ENSMUST00000111438 Erbb3Q61526 1339 aa15.86■□□□□ 0.13
Ddx55-202ENSMUST00000111438 Phkg2Q9DB30 406 aa15.86■□□□□ 0.13
Ddx55-202ENSMUST00000111438 Kcnh4A2A5F7 1018 aa15.85■□□□□ 0.13
Ddx55-202ENSMUST00000111438 Gnai1B2RSH2 354 aa15.85■□□□□ 0.13
Ddx55-202ENSMUST00000111438 Eno4Q8C042 619 aa15.85■□□□□ 0.13
Ddx55-202ENSMUST00000111438 Pdzd9Q9D9M4 266 aa15.85■□□□□ 0.13
Ddx55-202ENSMUST00000111438 Gnai3Q9DC51 354 aa15.85■□□□□ 0.13
Ddx55-202ENSMUST00000111438 Cdc37l1Q9CZP7 335 aa15.85■□□□□ 0.13
Ddx55-202ENSMUST00000111438 Ssfa2Q922B9 1252 aa15.84■□□□□ 0.13
Ddx55-202ENSMUST00000111438 Nkx2-3P97334 362 aa15.83■□□□□ 0.12
Ddx55-202ENSMUST00000111438 Ginm1Q91WR6 327 aa15.83■□□□□ 0.12
Ddx55-202ENSMUST00000111438 Dlg5E9Q9R9 1921 aa15.83■□□□□ 0.12
Ddx55-202ENSMUST00000111438 Rbm25B2RY56 838 aaKnown RBP15.82■□□□□ 0.12
Ddx55-202ENSMUST00000111438 Vps33bP59016 617 aa15.82■□□□□ 0.12
Ddx55-202ENSMUST00000111438 Sf3b2Q3UJB0 878 aaKnown RBP15.82■□□□□ 0.12
Ddx55-202ENSMUST00000111438 Ksr2Q3UVC0 959 aa15.82■□□□□ 0.12
Ddx55-202ENSMUST00000111438 Eif3bQ8JZQ9 803 aaKnown RBP15.82■□□□□ 0.12
Ddx55-202ENSMUST00000111438 Speer4bQ9D9F7 267 aa15.82■□□□□ 0.12
Ddx55-202ENSMUST00000111438 Tjp1P39447 1745 aaKnown RBP15.81■□□□□ 0.12
Ddx55-202ENSMUST00000111438 Prim1P20664 417 aa15.81■□□□□ 0.12
Ddx55-202ENSMUST00000111438 Eif5bQ05D44 1216 aaKnown RBP15.81■□□□□ 0.12
Ddx55-202ENSMUST00000111438 Larp1Q6ZQ58 1072 aaKnown RBP15.81■□□□□ 0.12
Ddx55-202ENSMUST00000111438 Gm21680A0A0G2JGR8 267 aa15.81■□□□□ 0.12
Ddx55-202ENSMUST00000111438 CastP51125 788 aa15.81■□□□□ 0.12
Ddx55-202ENSMUST00000111438 Sik1Q60670 779 aa15.81■□□□□ 0.12
Ddx55-202ENSMUST00000111438 Ankrd23Q812A3 306 aa15.81■□□□□ 0.12
Ddx55-202ENSMUST00000111438 Ggnbp2Q5SV77 696 aa15.8■□□□□ 0.12
Ddx55-202ENSMUST00000111438 Asic4Q7TNS7 539 aa15.8■□□□□ 0.12
Ddx55-202ENSMUST00000111438 Ccar1Q8CH18 1146 aaKnown RBP15.8■□□□□ 0.12
Ddx55-202ENSMUST00000111438 Klhdc4Q921I2 584 aa15.8■□□□□ 0.12
Ddx55-202ENSMUST00000111438 NudcO35685 332 aaKnown RBP15.79■□□□□ 0.12
Ddx55-202ENSMUST00000111438 Shank3Q4ACU6 1730 aa15.79■□□□□ 0.12
Ddx55-202ENSMUST00000111438 Chmp7Q8R1T1 451 aa15.79■□□□□ 0.12
Ddx55-202ENSMUST00000111438 Elp1Q7TT37 1333 aaKnown RBP15.79■□□□□ 0.12
Ddx55-202ENSMUST00000111438 Upf2A2AT37 1269 aaKnown RBP15.78■□□□□ 0.12
Ddx55-202ENSMUST00000111438 Fgd1P52734 960 aa15.78■□□□□ 0.12
Ddx55-202ENSMUST00000111438 Foxp4Q9DBY0 795 aaKnown RBP15.78■□□□□ 0.12
Ddx55-202ENSMUST00000111438 Igsf1Q7TQA1 1317 aa15.78■□□□□ 0.12
Ddx55-202ENSMUST00000111438 Sgsm1Q8BPQ7 1093 aa15.77■□□□□ 0.11
Ddx55-202ENSMUST00000111438 Usp16Q99LG0 825 aa15.77■□□□□ 0.11
Ddx55-202ENSMUST00000111438 Ppp4r2Q0VGB7 417 aa15.76■□□□□ 0.11
Ddx55-202ENSMUST00000111438 Slc5a1Q8C3K6 665 aa15.76■□□□□ 0.11
Ddx55-202ENSMUST00000111438 Tiam2Q6ZPF3 1715 aa15.76■□□□□ 0.11
Ddx55-202ENSMUST00000111438 Gm21663A0A0G2JE01 267 aa15.75■□□□□ 0.11
Ddx55-202ENSMUST00000111438 Gm7361D3Z6R1 267 aa15.75■□□□□ 0.11
Ddx55-202ENSMUST00000111438 5031410I06RikE9Q4E0 267 aa15.75■□□□□ 0.11
Ddx55-202ENSMUST00000111438 Gm1979E9QAN3 267 aa15.75■□□□□ 0.11
Ddx55-202ENSMUST00000111438 Gm5862K7N5V5 267 aa15.75■□□□□ 0.11
Ddx55-202ENSMUST00000111438 Gm10220K7N660 267 aa15.75■□□□□ 0.11
Ddx55-202ENSMUST00000111438 Exoc5Q3TPX4 708 aa15.75■□□□□ 0.11
Ddx55-202ENSMUST00000111438 Msh6P54276 1358 aaKnown RBP15.75■□□□□ 0.11
Ddx55-202ENSMUST00000111438 Gtf3c3Q3TMP1 882 aa15.75■□□□□ 0.11
Ddx55-202ENSMUST00000111438 U2surpQ6NV83 1029 aaKnown RBP15.75■□□□□ 0.11
Ddx55-202ENSMUST00000111438 Ly75Q60767 1723 aa15.75■□□□□ 0.11
Ddx55-202ENSMUST00000111438 Crb1Q8VHS2 1405 aa15.74■□□□□ 0.11
Ddx55-202ENSMUST00000111438 Ccdc171E9Q1U1 1324 aa15.74■□□□□ 0.11
Ddx55-202ENSMUST00000111438 Vamp4O70480 141 aa15.74■□□□□ 0.11
Ddx55-202ENSMUST00000111438 BcorQ8CGN4 1759 aa15.74■□□□□ 0.11
Ddx55-202ENSMUST00000111438 Abca3Q8R420 1704 aa15.74■□□□□ 0.11
Ddx55-202ENSMUST00000111438 Ddb1Q3U1J4 1140 aaKnown RBP15.74■□□□□ 0.11
Ddx55-202ENSMUST00000111438 Plcd4Q8K3R3 807 aa15.73■□□□□ 0.11
Ddx55-202ENSMUST00000111438 Btbd11Q6GQW0 1109 aa15.73■□□□□ 0.11
Ddx55-202ENSMUST00000111438 Ccdc155Q80VJ8 648 aa15.73■□□□□ 0.11
Ddx55-202ENSMUST00000111438 Dmrt2Q8BG36 561 aa15.73■□□□□ 0.11
Ddx55-202ENSMUST00000111438 Ints5Q8CHT3 1018 aa15.72■□□□□ 0.11
Ddx55-202ENSMUST00000111438 Col1a2Q01149 1372 aa15.72■□□□□ 0.11
Ddx55-202ENSMUST00000111438 Senp3Q9EP97 568 aaKnown RBP15.72■□□□□ 0.11
Ddx55-202ENSMUST00000111438 Cyp2d12Q8BVD2 504 aa15.71■□□□□ 0.11
Ddx55-202ENSMUST00000111438 Eif4a1P60843 406 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 89.4 ms