RNA–Protein interactions for RNA: ENSMUST00000108661.7

Chd3-202, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Chd3, Length 7,261 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-202ENSMUST00000108661 Msl1Q6PDM1 616 aa13.52□□□□□ -0.24
Chd3-202ENSMUST00000108661 Nol12Q8BG17 217 aa13.52□□□□□ -0.25
Chd3-202ENSMUST00000108661 NaspQ99MD9 773 aaKnown RBP13.52□□□□□ -0.25
Chd3-202ENSMUST00000108661 Hdac9Q99N13 588 aa13.52□□□□□ -0.25
Chd3-202ENSMUST00000108661 Dennd4bQ3U1Y4 1499 aa13.52□□□□□ -0.25
Chd3-202ENSMUST00000108661 Ddx58Q6Q899 926 aa13.52□□□□□ -0.25
Chd3-202ENSMUST00000108661 Mcm2P97310 904 aa13.52□□□□□ -0.25
Chd3-202ENSMUST00000108661 GptQ8QZR5 496 aa13.52□□□□□ -0.25
Chd3-202ENSMUST00000108661 Zscan20B2KFW1 1030 aa13.51□□□□□ -0.25
Chd3-202ENSMUST00000108661 Utp3Q9JI13 469 aaKnown RBP13.51□□□□□ -0.25
Chd3-202ENSMUST00000108661 Ces1aE9PYP1 563 aa13.51□□□□□ -0.25
Chd3-202ENSMUST00000108661 Ccnl1Q52KE7 532 aaKnown RBP13.51□□□□□ -0.25
Chd3-202ENSMUST00000108661 Bms1Q6PGF5 1284 aaKnown RBP13.51□□□□□ -0.25
Chd3-202ENSMUST00000108661 Nek4Q9Z1J2 792 aa13.51□□□□□ -0.25
Chd3-202ENSMUST00000108661 Nap1l1P28656 391 aaKnown RBP13.51□□□□□ -0.25
Chd3-202ENSMUST00000108661 MpndQ3TV65 487 aa13.51□□□□□ -0.25
Chd3-202ENSMUST00000108661 NsmfQ99NF2 532 aa13.51□□□□□ -0.25
Chd3-202ENSMUST00000108661 GpkowQ56A08 488 aa13.51□□□□□ -0.25
Chd3-202ENSMUST00000108661 Ints3Q7TPD0 1041 aaKnown RBP13.51□□□□□ -0.25
Chd3-202ENSMUST00000108661 Camsap2Q8C1B1 1461 aa13.51□□□□□ -0.25
Chd3-202ENSMUST00000108661 Terf1P70371 421 aa13.51□□□□□ -0.25
Chd3-202ENSMUST00000108661 Spty2d1Q68FG3 682 aa13.51□□□□□ -0.25
Chd3-202ENSMUST00000108661 Plekhg2Q6KAU7 1340 aa13.5□□□□□ -0.25
Chd3-202ENSMUST00000108661 Ddx46Q569Z5 1032 aaKnown RBP13.5□□□□□ -0.25
Chd3-202ENSMUST00000108661 Arap1Q4LDD4 1452 aa13.5□□□□□ -0.25
Chd3-202ENSMUST00000108661 Tiam1Q60610 1591 aa13.5□□□□□ -0.25
Chd3-202ENSMUST00000108661 Skap1Q3UUV5 355 aa13.5□□□□□ -0.25
Chd3-202ENSMUST00000108661 Themis2Q91YX0 663 aa13.5□□□□□ -0.25
Chd3-202ENSMUST00000108661 Q7TT23 1179 aa13.5□□□□□ -0.25
Chd3-202ENSMUST00000108661 Atl3Q91YH5 541 aa13.49□□□□□ -0.25
Chd3-202ENSMUST00000108661 Tnni2P13412 182 aa13.49□□□□□ -0.25
Chd3-202ENSMUST00000108661 WizO88286 1684 aaKnown RBP13.49□□□□□ -0.25
Chd3-202ENSMUST00000108661 Abcc1O35379 1528 aa13.48□□□□□ -0.25
Chd3-202ENSMUST00000108661 Fsd2Q8BZ52 692 aa13.48□□□□□ -0.25
Chd3-202ENSMUST00000108661 Myd88P22366 296 aa13.48□□□□□ -0.25
Chd3-202ENSMUST00000108661 Naip6Q9JIB6 1403 aa13.48□□□□□ -0.25
Chd3-202ENSMUST00000108661 RtcbQ99LF4 505 aaKnown RBP13.48□□□□□ -0.25
Chd3-202ENSMUST00000108661 DroshaQ5HZJ0 1373 aaKnown RBP13.48□□□□□ -0.25
Chd3-202ENSMUST00000108661 Ncf1Q09014 390 aa13.48□□□□□ -0.25
Chd3-202ENSMUST00000108661 Cul5Q9D5V5 780 aa13.48□□□□□ -0.25
Chd3-202ENSMUST00000108661 Glipr1l2Q9CQ35 332 aa13.48□□□□□ -0.25
Chd3-202ENSMUST00000108661 Plekhh1Q80TI1 1356 aa13.47□□□□□ -0.25
Chd3-202ENSMUST00000108661 Kif20aP97329 887 aa13.47□□□□□ -0.25
Chd3-202ENSMUST00000108661 RarsQ9D0I9 660 aaKnown RBP13.47□□□□□ -0.25
Chd3-202ENSMUST00000108661 Pcf11G3X9Z4 1553 aa13.47□□□□□ -0.25
Chd3-202ENSMUST00000108661 Cyp26c1B2RXA7 518 aa13.47□□□□□ -0.25
Chd3-202ENSMUST00000108661 Lrrc45Q8CIM1 670 aa13.47□□□□□ -0.25
Chd3-202ENSMUST00000108661 Naip7Q9JIB3 1402 aa13.47□□□□□ -0.25
Chd3-202ENSMUST00000108661 SkilQ60665 675 aa13.47□□□□□ -0.25
Chd3-202ENSMUST00000108661 Wdr7Q920I9 1489 aa13.46□□□□□ -0.25
Chd3-202ENSMUST00000108661 Kifc2O08672 792 aa13.46□□□□□ -0.25
Chd3-202ENSMUST00000108661 Mum1Q6DID5 682 aa13.46□□□□□ -0.25
Chd3-202ENSMUST00000108661 Cadps2Q8BYR5 1297 aa13.46□□□□□ -0.25
Chd3-202ENSMUST00000108661 Efcab2Q9CQ46 164 aa13.46□□□□□ -0.25
Chd3-202ENSMUST00000108661 Eif4g1Q6NZJ6 1600 aaKnown RBP13.46□□□□□ -0.26
Chd3-202ENSMUST00000108661 NppbP40753 121 aa13.46□□□□□ -0.26
Chd3-202ENSMUST00000108661 HmmrQ00547 794 aaKnown RBP13.46□□□□□ -0.26
Chd3-202ENSMUST00000108661 Pknox2Q8BG99 474 aa13.46□□□□□ -0.26
Chd3-202ENSMUST00000108661 Samm50Q8BGH2 469 aa13.46□□□□□ -0.26
Chd3-202ENSMUST00000108661 ImmtQ8CAQ8 757 aaKnown RBP13.45□□□□□ -0.26
Chd3-202ENSMUST00000108661 Mex3cQ05A36 652 aaKnown RBP13.45□□□□□ -0.26
Chd3-202ENSMUST00000108661 Stk11ipQ3TAA7 1072 aa13.45□□□□□ -0.26
Chd3-202ENSMUST00000108661 Dusp9Q7TNL7 452 aa13.45□□□□□ -0.26
Chd3-202ENSMUST00000108661 PrkcshO08795 521 aa13.45□□□□□ -0.26
Chd3-202ENSMUST00000108661 Ppp1r21Q3TDD9 780 aa13.45□□□□□ -0.26
Chd3-202ENSMUST00000108661 Irf9Q61179 399 aa13.45□□□□□ -0.26
Chd3-202ENSMUST00000108661 Ddrgk1Q80WW9 315 aa13.45□□□□□ -0.26
Chd3-202ENSMUST00000108661 Rnf216P58283 853 aa13.44□□□□□ -0.26
Chd3-202ENSMUST00000108661 Dydc2Q9D3X8 139 aa13.44□□□□□ -0.26
Chd3-202ENSMUST00000108661 ParvgQ9ERD8 331 aa13.44□□□□□ -0.26
Chd3-202ENSMUST00000108661 Q9D9S1 216 aa13.44□□□□□ -0.26
Chd3-202ENSMUST00000108661 Pdcd6ipQ9WU78 869 aaKnown RBP13.44□□□□□ -0.26
Chd3-202ENSMUST00000108661 Kdm5bQ80Y84 1544 aa13.44□□□□□ -0.26
Chd3-202ENSMUST00000108661 Pnmal2G3X9N3 661 aa13.44□□□□□ -0.26
Chd3-202ENSMUST00000108661 Cfap65Q3V0B4 1847 aa13.44□□□□□ -0.26
Chd3-202ENSMUST00000108661 PogkQ80TC5 607 aa13.44□□□□□ -0.26
Chd3-202ENSMUST00000108661 AidaQ8C4Q6 305 aa13.44□□□□□ -0.26
Chd3-202ENSMUST00000108661 Fez1Q8K0X8 392 aa13.44□□□□□ -0.26
Chd3-202ENSMUST00000108661 Soga3Q6NZL0 945 aa13.44□□□□□ -0.26
Chd3-202ENSMUST00000108661 Lrrfip2Q91WK0 415 aa13.44□□□□□ -0.26
Chd3-202ENSMUST00000108661 Stxbp4Q9WV89 557 aa13.44□□□□□ -0.26
Chd3-202ENSMUST00000108661 Tmem132eQ6IEE6 982 aa13.44□□□□□ -0.26
Chd3-202ENSMUST00000108661 Ift74Q8BKE9 600 aa13.44□□□□□ -0.26
Chd3-202ENSMUST00000108661 Cwc25Q9DBF7 416 aa13.44□□□□□ -0.26
Chd3-202ENSMUST00000108661 IncenpQ9WU62 880 aa13.44□□□□□ -0.26
Chd3-202ENSMUST00000108661 Prr29B1ARI9 187 aa13.43□□□□□ -0.26
Chd3-202ENSMUST00000108661 Nolc1E9Q5C9 702 aaKnown RBP13.43□□□□□ -0.26
Chd3-202ENSMUST00000108661 Cdkl5Q3UTQ8 938 aa13.43□□□□□ -0.26
Chd3-202ENSMUST00000108661 Ltv1Q6NSQ7 470 aaKnown RBP13.43□□□□□ -0.26
Chd3-202ENSMUST00000108661 Ginm1Q91WR6 327 aa13.43□□□□□ -0.26
Chd3-202ENSMUST00000108661 Rapgef3Q8VCC8 918 aa13.43□□□□□ -0.26
Chd3-202ENSMUST00000108661 Noc2lQ9WV70 747 aaKnown RBP13.43□□□□□ -0.26
Chd3-202ENSMUST00000108661 Nap1l5Q9JJF0 156 aa13.42□□□□□ -0.26
Chd3-202ENSMUST00000108661 Gcom1E9PZ54 550 aa13.42□□□□□ -0.26
Chd3-202ENSMUST00000108661 MyzapQ3UIJ9 466 aa13.42□□□□□ -0.26
Chd3-202ENSMUST00000108661 Gpr162Q3UN16 588 aa13.42□□□□□ -0.26
Chd3-202ENSMUST00000108661 NapbP28663 298 aa13.42□□□□□ -0.26
Chd3-202ENSMUST00000108661 Znf771Q8BJ90 317 aa13.42□□□□□ -0.26
Chd3-202ENSMUST00000108661 AnlnQ8K298 1121 aaKnown RBP13.42□□□□□ -0.26
Chd3-202ENSMUST00000108661 BbxQ8VBW5 907 aa13.42□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 64.3 ms