RNA–Protein interactions for RNA: ENSMUST00000093346.5

H2afv-201, Transcript of Histone H2A.V, mousemouse

TSL 1 (best) BASIC

Gene H2afv, Length 519 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2afv-201ENSMUST00000093346 Trpm3Q5F4S9 1721 aa17.38■□□□□ 0.37
H2afv-201ENSMUST00000093346 Gm21663A0A0G2JE01 267 aa17.37■□□□□ 0.37
H2afv-201ENSMUST00000093346 Gm7361D3Z6R1 267 aa17.37■□□□□ 0.37
H2afv-201ENSMUST00000093346 5031410I06RikE9Q4E0 267 aa17.37■□□□□ 0.37
H2afv-201ENSMUST00000093346 Gm1979E9QAN3 267 aa17.37■□□□□ 0.37
H2afv-201ENSMUST00000093346 Gm5862K7N5V5 267 aa17.37■□□□□ 0.37
H2afv-201ENSMUST00000093346 Gm10220K7N660 267 aa17.37■□□□□ 0.37
H2afv-201ENSMUST00000093346 Zscan21Q07231 555 aa17.37■□□□□ 0.37
H2afv-201ENSMUST00000093346 Bsdc1Q80Y55 427 aa17.37■□□□□ 0.37
H2afv-201ENSMUST00000093346 Afg3l2Q8JZQ2 802 aaKnown RBP17.37■□□□□ 0.37
H2afv-201ENSMUST00000093346 Chmp7Q8R1T1 451 aa17.37■□□□□ 0.37
H2afv-201ENSMUST00000093346 Arhgap33Q80YF9 1305 aa17.37■□□□□ 0.37
H2afv-201ENSMUST00000093346 Mapk8ip3Q9ESN9 1337 aa17.37■□□□□ 0.37
H2afv-201ENSMUST00000093346 Mrs2Q5NCE8 434 aa17.36■□□□□ 0.37
H2afv-201ENSMUST00000093346 Slc5a1Q8C3K6 665 aa17.36■□□□□ 0.37
H2afv-201ENSMUST00000093346 Vars2Q3U2A8 1060 aa17.35■□□□□ 0.37
H2afv-201ENSMUST00000093346 TmpoQ61033 693 aaKnown RBP17.35■□□□□ 0.37
H2afv-201ENSMUST00000093346 ApobrQ8VBT6 942 aa17.35■□□□□ 0.37
H2afv-201ENSMUST00000093346 Ssfa2Q922B9 1252 aa17.35■□□□□ 0.37
H2afv-201ENSMUST00000093346 Aox2Q5SGK3 1345 aa17.35■□□□□ 0.37
H2afv-201ENSMUST00000093346 Apba2P98084 750 aa17.34■□□□□ 0.37
H2afv-201ENSMUST00000093346 Znf541Q0GGX2 1363 aa17.34■□□□□ 0.37
H2afv-201ENSMUST00000093346 Tcerg1Q8CGF7 1100 aaKnown RBP17.34■□□□□ 0.37
H2afv-201ENSMUST00000093346 Pdzd9Q9D9M4 266 aa17.34■□□□□ 0.37
H2afv-201ENSMUST00000093346 Asic4Q7TNS7 539 aa17.33■□□□□ 0.36
H2afv-201ENSMUST00000093346 Cabp2Q9JLK4 216 aa17.33■□□□□ 0.36
H2afv-201ENSMUST00000093346 Sos2Q02384 1333 aa17.32■□□□□ 0.36
H2afv-201ENSMUST00000093346 Ccnl1Q52KE7 532 aaKnown RBP17.32■□□□□ 0.36
H2afv-201ENSMUST00000093346 Rps6ka4Q9Z2B9 773 aa17.32■□□□□ 0.36
H2afv-201ENSMUST00000093346 Abca3Q8R420 1704 aa17.31■□□□□ 0.36
H2afv-201ENSMUST00000093346 Q4VA45 678 aa17.31■□□□□ 0.36
H2afv-201ENSMUST00000093346 OscarQ8VBT3 265 aa17.31■□□□□ 0.36
H2afv-201ENSMUST00000093346 Golga2Q921M4 999 aa17.31■□□□□ 0.36
H2afv-201ENSMUST00000093346 Crb1Q8VHS2 1405 aa17.3■□□□□ 0.36
H2afv-201ENSMUST00000093346 Snapc4Q8BP86 1333 aa17.3■□□□□ 0.36
H2afv-201ENSMUST00000093346 Map4k4P97820 1233 aaKnown RBP17.3■□□□□ 0.36
H2afv-201ENSMUST00000093346 Abcc12Q80WJ6 1366 aa17.29■□□□□ 0.36
H2afv-201ENSMUST00000093346 Apaf1O88879 1249 aa17.29■□□□□ 0.36
H2afv-201ENSMUST00000093346 Hmgb2P30681 210 aaKnown RBP17.29■□□□□ 0.36
H2afv-201ENSMUST00000093346 Klc3Q91W40 508 aa17.29■□□□□ 0.36
H2afv-201ENSMUST00000093346 Erbb3Q61526 1339 aa17.28■□□□□ 0.36
H2afv-201ENSMUST00000093346 Shank3Q4ACU6 1730 aa17.28■□□□□ 0.36
H2afv-201ENSMUST00000093346 Rtf1A2AQ19 715 aaKnown RBP17.28■□□□□ 0.36
H2afv-201ENSMUST00000093346 Tjp1P39447 1745 aaKnown RBP17.27■□□□□ 0.35
H2afv-201ENSMUST00000093346 Kdm2bQ6P1G2 1309 aa17.26■□□□□ 0.35
H2afv-201ENSMUST00000093346 Cavin4A2AMM0 362 aa17.26■□□□□ 0.35
H2afv-201ENSMUST00000093346 Pim2Q62070 370 aa17.26■□□□□ 0.35
H2afv-201ENSMUST00000093346 NrdcQ8BHG1 1161 aa17.26■□□□□ 0.35
H2afv-201ENSMUST00000093346 Esx1O88933 382 aa17.25■□□□□ 0.35
H2afv-201ENSMUST00000093346 Q8BT18 775 aa17.25■□□□□ 0.35
H2afv-201ENSMUST00000093346 Kiaa0319lQ8K135 1048 aa17.25■□□□□ 0.35
H2afv-201ENSMUST00000093346 Ciz1Q8VEH2 845 aa17.25■□□□□ 0.35
H2afv-201ENSMUST00000093346 Hdac6Q9Z2V5 1149 aa17.25■□□□□ 0.35
H2afv-201ENSMUST00000093346 Sos1Q62245 1319 aa17.24■□□□□ 0.35
H2afv-201ENSMUST00000093346 Ints5Q8CHT3 1018 aa17.24■□□□□ 0.35
H2afv-201ENSMUST00000093346 Ubr2Q6WKZ8 1755 aa17.24■□□□□ 0.35
H2afv-201ENSMUST00000093346 Ankrd13dQ6PD24 605 aa17.23■□□□□ 0.35
H2afv-201ENSMUST00000093346 Snap23O09044 210 aa17.22■□□□□ 0.35
H2afv-201ENSMUST00000093346 Usp19Q3UJD6 1360 aa17.22■□□□□ 0.35
H2afv-201ENSMUST00000093346 Uhrf1bp1B2KF50 1429 aa17.21■□□□□ 0.35
H2afv-201ENSMUST00000093346 Slc4a2P13808 1237 aaKnown RBP17.21■□□□□ 0.35
H2afv-201ENSMUST00000093346 Swt1Q9DBQ9 907 aa17.21■□□□□ 0.35
H2afv-201ENSMUST00000093346 Ccdc155Q80VJ8 648 aa17.2■□□□□ 0.34
H2afv-201ENSMUST00000093346 Jmjd4Q8BFT6 427 aa17.2■□□□□ 0.34
H2afv-201ENSMUST00000093346 Uspl1Q3ULM6 1089 aa17.19■□□□□ 0.34
H2afv-201ENSMUST00000093346 Myo5bP21271 1818 aa17.19■□□□□ 0.34
H2afv-201ENSMUST00000093346 Stra8P70278 393 aa17.18■□□□□ 0.34
H2afv-201ENSMUST00000093346 Nkx2-3P97334 362 aa17.18■□□□□ 0.34
H2afv-201ENSMUST00000093346 Cypt1Q8CH20 168 aa17.18■□□□□ 0.34
H2afv-201ENSMUST00000093346 Atg3Q9CPX6 314 aa17.18■□□□□ 0.34
H2afv-201ENSMUST00000093346 AceP09470 1312 aa17.18■□□□□ 0.34
H2afv-201ENSMUST00000093346 Dusp27Q148W8 1138 aa17.17■□□□□ 0.34
H2afv-201ENSMUST00000093346 VirmaA2AIV2 1811 aaKnown RBP17.17■□□□□ 0.34
H2afv-201ENSMUST00000093346 Supt5hO55201 1082 aaKnown RBP17.16■□□□□ 0.34
H2afv-201ENSMUST00000093346 Ezh2Q61188 746 aaKnown RBP17.16■□□□□ 0.34
H2afv-201ENSMUST00000093346 Ncbp3Q8BZR9 615 aaKnown RBP17.16■□□□□ 0.34
H2afv-201ENSMUST00000093346 Smg7Q5RJH6 1138 aaKnown RBP17.15■□□□□ 0.34
H2afv-201ENSMUST00000093346 Btbd11Q6GQW0 1109 aa17.15■□□□□ 0.34
H2afv-201ENSMUST00000093346 Dcaf5Q80T85 946 aa17.15■□□□□ 0.34
H2afv-201ENSMUST00000093346 Mak16Q8BGS0 296 aaKnown RBP17.15■□□□□ 0.34
H2afv-201ENSMUST00000093346 Ric1Q69ZJ7 1422 aa17.14■□□□□ 0.33
H2afv-201ENSMUST00000093346 Tiam2Q6ZPF3 1715 aa17.14■□□□□ 0.33
H2afv-201ENSMUST00000093346 Bicdl1A0JNT9 577 aa17.14■□□□□ 0.33
H2afv-201ENSMUST00000093346 Efcab2Q9CQ46 164 aa17.14■□□□□ 0.33
H2afv-201ENSMUST00000093346 Cap2Q9CYT6 476 aa17.13■□□□□ 0.33
H2afv-201ENSMUST00000093346 CoblQ5NBX1 1337 aaKnown RBP17.12■□□□□ 0.33
H2afv-201ENSMUST00000093346 Igsf1Q7TQA1 1317 aa17.12■□□□□ 0.33
H2afv-201ENSMUST00000093346 Ildr2B5TVM2 661 aa17.11■□□□□ 0.33
H2afv-201ENSMUST00000093346 Pde4dQ01063 747 aa17.11■□□□□ 0.33
H2afv-201ENSMUST00000093346 Ggnbp2Q5SV77 696 aa17.11■□□□□ 0.33
H2afv-201ENSMUST00000093346 Adcy9P51830 1353 aa17.11■□□□□ 0.33
H2afv-201ENSMUST00000093346 Prim1P20664 417 aa17.1■□□□□ 0.33
H2afv-201ENSMUST00000093346 Smarcc1P97496 1104 aa17.09■□□□□ 0.33
H2afv-201ENSMUST00000093346 Fam198bQ3UPI1 517 aa17.09■□□□□ 0.33
H2afv-201ENSMUST00000093346 CrbnQ8C7D2 445 aa17.09■□□□□ 0.33
H2afv-201ENSMUST00000093346 Nav1Q8CH77 1875 aa17.08■□□□□ 0.33
H2afv-201ENSMUST00000093346 Msh6P54276 1358 aaKnown RBP17.08■□□□□ 0.32
H2afv-201ENSMUST00000093346 Kif23E9Q5G3 953 aa17.08■□□□□ 0.32
H2afv-201ENSMUST00000093346 Akt1s1Q9D1F4 257 aa17.07■□□□□ 0.32
H2afv-201ENSMUST00000093346 Kndc1Q0KK55 1742 aa17.07■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 35.9 ms