RNA–Protein interactions for RNA: ENSMUST00000089332.4

Col8a1-201, Transcript of Collagen alpha-1(VIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col8a1, Length 5,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1-201ENSMUST00000089332 Ripk4Q9ERK0 786 aa14.3□□□□□ -0.12
Col8a1-201ENSMUST00000089332 Dnajc2P54103 621 aaKnown RBP14.3□□□□□ -0.12
Col8a1-201ENSMUST00000089332 Ncoa3O09000 1398 aa14.3□□□□□ -0.12
Col8a1-201ENSMUST00000089332 Bicdl1A0JNT9 577 aa14.3□□□□□ -0.12
Col8a1-201ENSMUST00000089332 Spty2d1Q68FG3 682 aa14.3□□□□□ -0.12
Col8a1-201ENSMUST00000089332 Klc3Q91W40 508 aa14.3□□□□□ -0.12
Col8a1-201ENSMUST00000089332 Nop14Q8R3N1 860 aaKnown RBP14.3□□□□□ -0.12
Col8a1-201ENSMUST00000089332 Luc7lQ9CYI4 371 aaKnown RBP14.3□□□□□ -0.12
Col8a1-201ENSMUST00000089332 Gm1043A0A140LJC2 1431 aa14.3□□□□□ -0.12
Col8a1-201ENSMUST00000089332 Wwc1Q5SXA9 1104 aa14.29□□□□□ -0.12
Col8a1-201ENSMUST00000089332 TnmdQ9EP64 317 aa14.29□□□□□ -0.12
Col8a1-201ENSMUST00000089332 EappQ5BU09 281 aa14.29□□□□□ -0.12
Col8a1-201ENSMUST00000089332 Rrs1Q9CYH6 365 aaKnown RBP14.29□□□□□ -0.12
Col8a1-201ENSMUST00000089332 Znf287Q9EQB9 759 aa14.29□□□□□ -0.12
Col8a1-201ENSMUST00000089332 Pde4dQ01063 747 aa14.29□□□□□ -0.12
Col8a1-201ENSMUST00000089332 AidaQ8C4Q6 305 aa14.29□□□□□ -0.12
Col8a1-201ENSMUST00000089332 3425401B19RikD3Z1D3 1412 aa14.29□□□□□ -0.12
Col8a1-201ENSMUST00000089332 Mns1Q61884 491 aa14.29□□□□□ -0.12
Col8a1-201ENSMUST00000089332 Idi2Q8BFZ6 227 aa14.29□□□□□ -0.12
Col8a1-201ENSMUST00000089332 Lrrc45Q8CIM1 670 aa14.29□□□□□ -0.12
Col8a1-201ENSMUST00000089332 Slc5a4bQ91ZP4 660 aa14.29□□□□□ -0.12
Col8a1-201ENSMUST00000089332 Lmbr1Q9JIT0 490 aa14.29□□□□□ -0.12
Col8a1-201ENSMUST00000089332 Fnbp4Q6ZQ03 1031 aa14.29□□□□□ -0.12
Col8a1-201ENSMUST00000089332 Pms1Q8K119 917 aa14.29□□□□□ -0.12
Col8a1-201ENSMUST00000089332 TimelessQ9R1X4 1197 aa14.29□□□□□ -0.12
Col8a1-201ENSMUST00000089332 Samd1D3YXK1 519 aa14.28□□□□□ -0.12
Col8a1-201ENSMUST00000089332 DroshaQ5HZJ0 1373 aaKnown RBP14.28□□□□□ -0.12
Col8a1-201ENSMUST00000089332 Slc26a8Q8R0C3 999 aa14.28□□□□□ -0.12
Col8a1-201ENSMUST00000089332 Fam13aQ8BGI4 693 aa14.28□□□□□ -0.12
Col8a1-201ENSMUST00000089332 Hdgfl1Q2VPR5 283 aa14.28□□□□□ -0.12
Col8a1-201ENSMUST00000089332 Ddx58Q6Q899 926 aa14.28□□□□□ -0.12
Col8a1-201ENSMUST00000089332 Tmco3Q8BH01 678 aa14.28□□□□□ -0.12
Col8a1-201ENSMUST00000089332 Ncbp3Q8BZR9 615 aaKnown RBP14.28□□□□□ -0.12
Col8a1-201ENSMUST00000089332 Ccne1Q61457 408 aa14.27□□□□□ -0.12
Col8a1-201ENSMUST00000089332 Strn4P58404 760 aa14.27□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Prm3Q62100 101 aa14.27□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Rufy2Q8R4C2 606 aa14.27□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Thoc2B1AZI6 1594 aaKnown RBP14.27□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Fam135aQ6NS59 1506 aa14.27□□□□□ -0.13
Col8a1-201ENSMUST00000089332 MycnP03966 462 aaKnown RBP14.27□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Pknox2Q8BG99 474 aa14.27□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Slc12a5Q91V14 1138 aa14.27□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Cdkn1cP49919 348 aa14.26□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Ppip5k2Q6ZQB6 1129 aa14.26□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Pik3c2gO70167 1506 aa14.26□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Slc7a3P70423 618 aa14.26□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Brf1Q8CFK2 676 aa14.26□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Znf704Q9ERQ3 566 aa14.26□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Sptbn5F6UCX4 1208 aa14.26□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Farp2Q91VS8 1065 aa14.26□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Eif5P59325 429 aaKnown RBP14.26□□□□□ -0.13
Col8a1-201ENSMUST00000089332 NinlQ6ZQ12 1394 aa14.25□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Gapvd1Q6PAR5 1458 aa14.25□□□□□ -0.13
Col8a1-201ENSMUST00000089332 GpkowQ56A08 488 aa14.25□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Plekhm2Q80TQ5 1018 aa14.25□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Anp32eP97822 260 aaKnown RBP14.25□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Galntl5Q9D4M9 431 aa14.25□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Hs1bp3Q3TC93 395 aa14.25□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Vps37dQ810I0 261 aa14.25□□□□□ -0.13
Col8a1-201ENSMUST00000089332 AI481877A2ALV5 1481 aa14.24□□□□□ -0.13
Col8a1-201ENSMUST00000089332 NefhP19246 1090 aa14.24□□□□□ -0.13
Col8a1-201ENSMUST00000089332 IbspQ61711 324 aa14.24□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Tfip11Q9ERA6 838 aaKnown RBP14.24□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Chaf1aQ9QWF0 911 aa14.24□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Eif4g1Q6NZJ6 1600 aaKnown RBP14.24□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Lrrfip1Q3UZ39 729 aaKnown RBP14.24□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Acsbg1Q99PU5 721 aa14.24□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Stxbp4Q9WV89 557 aa14.24□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Nat10Q8K224 1024 aaKnown RBP14.24□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Cfap58B2RW38 873 aa14.23□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Mctp1E9PV86 951 aa14.23□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Prkar2bP31324 416 aa14.23□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Ppp1r42Q8R1Z4 357 aa14.23□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Cfap45Q9D9U9 551 aa14.23□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Dusp9Q7TNL7 452 aa14.23□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Fancd2Q80V62 1450 aa14.23□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Rbm27Q5SFM8 1060 aaKnown RBP14.23□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Golim4Q8BXA1 655 aa14.23□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Nup88Q8CEC0 753 aaKnown RBP14.23□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Med4Q9CQA5 270 aa14.23□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Nap1l5Q9JJF0 156 aa14.23□□□□□ -0.13
Col8a1-201ENSMUST00000089332 BC005561E9Q5E2 1589 aa14.23□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Phldb2Q8K1N2 1249 aa14.23□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Ccdc39Q9D5Y1 937 aa14.23□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Cep112Q5PR68 954 aa14.22□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Adck5Q80V03 582 aa14.22□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Slc13a4Q8BZ82 625 aa14.22□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Tnni2P13412 182 aa14.22□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Bag1Q60739 355 aa14.22□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Bag3Q9JLV1 577 aaKnown RBP14.22□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Pnmal2G3X9N3 661 aa14.22□□□□□ -0.13
Col8a1-201ENSMUST00000089332 CastP51125 788 aa14.22□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Cers3Q1A3B0 383 aa14.22□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Ccdc172Q810N9 267 aa14.22□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Egfem1Q8C088 590 aa14.22□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Atp7aQ64430 1491 aa14.22□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Dctn1O08788 1281 aa14.22□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Exoc5Q3TPX4 708 aa14.22□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Soga3Q6NZL0 945 aa14.22□□□□□ -0.13
Col8a1-201ENSMUST00000089332 NapbP28663 298 aa14.21□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 207.1 ms