RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Jakmip3Q5DTN8 844 aa16.33■□□□□ 0.2
Col3a1-201ENSMUST00000087883 ImmtQ8CAQ8 757 aaKnown RBP16.33■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Smc5Q8CG46 1101 aaKnown RBP16.33■□□□□ 0.2
Col3a1-201ENSMUST00000087883 ZwintQ9CQU5 252 aa16.33■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Tax1bp1Q3UKC1 814 aaKnown RBP16.32■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Gm18336A0A140LIU8 765 aa16.32■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Cdk19Q8BWD8 501 aa16.32■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Dennd6aQ8BH65 605 aa16.32■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Atf3Q60765 181 aa16.32■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Ttc19Q8CC21 365 aa16.32■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Znf131Q8K3J5 619 aa16.32■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Anapc15-psA0A140T8L6 141 aa16.31■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Gse1Q3U3C9 1213 aa16.31■□□□□ 0.2
Col3a1-201ENSMUST00000087883 IncenpQ9WU62 880 aa16.31■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Efcab5A0JP43 1406 aa16.31■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Map3k5O35099 1380 aa16.31■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Map2k1P31938 393 aa16.31■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Bcl11bQ99PV8 884 aa16.31■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Hspa4Q61316 841 aa16.3■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Paxbp1P58501 919 aa16.3■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Ncapg2Q6DFV1 1138 aa16.3■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Ddx58Q6Q899 926 aa16.3■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Adcy5P84309 1262 aa16.3■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Gsdma2Q32M21 443 aa16.3■□□□□ 0.2
Col3a1-201ENSMUST00000087883 AidaQ8C4Q6 305 aa16.3■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Luzp1Q8R4U7 1068 aaKnown RBP16.3■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Smc1bQ920F6 1248 aa16.3■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Lrrfip1Q3UZ39 729 aaKnown RBP16.29■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Golim4Q8BXA1 655 aa16.29■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Aldh1l1Q8R0Y6 902 aa16.29■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Lrrfip2Q91WK0 415 aa16.29■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Abcf1Q6P542 837 aaKnown RBP16.29■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Ccdc158Q8CDI6 1109 aa16.29■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Tmc2Q8R4P4 888 aa16.29■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Stxbp4Q9WV89 557 aa16.29■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Fbf1A2A870 1173 aa16.28■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Wwc1Q5SXA9 1104 aa16.28■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Cct4P80315 539 aaKnown RBP16.28■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Ccdc191J3QQ27 883 aa16.28■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Klf15Q9EPW2 415 aa16.28■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Polr1aO35134 1717 aaKnown RBP16.28■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Trim34bJ3QNR8 485 aa16.28■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Rasa1E9PYG6 1038 aa16.27■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Ddx19aQ61655 478 aaKnown RBP16.27■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Pdcl2Q78Y63 240 aa16.27■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Ppp1r9bQ6R891 817 aaKnown RBP16.27■□□□□ 0.2
Col3a1-201ENSMUST00000087883 PrxO55103 1391 aa16.27■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Serpina10Q8R121 448 aa16.27■□□□□ 0.2
Col3a1-201ENSMUST00000087883 Arhgap5P97393 1501 aa16.27■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Gm1979E9QAN3 267 aa16.27■□□□□ 0.19
Col3a1-201ENSMUST00000087883 LarsQ8BMJ2 1178 aa16.27■□□□□ 0.19
Col3a1-201ENSMUST00000087883 NinlQ6ZQ12 1394 aa16.26■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Cep131Q62036 1060 aa16.26■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Sass6Q80UK7 654 aa16.26■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Rnf34Q99KR6 376 aa16.26■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Galntl5Q9D4M9 431 aa16.26■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Terf2O35144 541 aa16.26■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Ccdc73Q8CDM4 1066 aa16.26■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Slc26a8Q8R0C3 999 aa16.26■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Plekhd1B2RPU2 505 aa16.25■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Ell2Q3UKU1 639 aa16.25■□□□□ 0.19
Col3a1-201ENSMUST00000087883 4931400O07RikQ9D4M5 137 aa16.25■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Zeb2Q9R0G7 1215 aa16.25■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Erlin1Q91X78 346 aa16.25■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Btbd11Q6GQW0 1109 aa16.25■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Znf526Q8BI66 675 aa16.25■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Bag4Q8CI61 457 aa16.25■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Bbof1Q3V079 533 aa16.24■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Ccdc93Q7TQK5 629 aa16.24■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Trim11Q99PQ2 467 aa16.24■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Rrs1Q9CYH6 365 aaKnown RBP16.24■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Knop1Q9Z2Q2 478 aaKnown RBP16.24■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Tacc1Q6Y685 774 aa16.24■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Snw1Q9CSN1 536 aaKnown RBP16.24■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Zkscan7E9PVW1 718 aa16.24■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Map4k4P97820 1233 aaKnown RBP16.24■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Gm21698A0A087WQP8 267 aa16.23■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Hs1bp3Q3TC93 395 aa16.23■□□□□ 0.19
Col3a1-201ENSMUST00000087883 TmpoQ61033 693 aaKnown RBP16.23■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Cep135Q6P5D4 1140 aa16.23■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Arhgef18Q6P9R4 1021 aa16.23■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Ccdc172Q810N9 267 aa16.23■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Cfap69Q8BH53 942 aa16.23■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Gm21663A0A0G2JE01 267 aa16.23■□□□□ 0.19
Col3a1-201ENSMUST00000087883 5031410I06RikE9Q4E0 267 aa16.23■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Gm5862K7N5V5 267 aa16.23■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Gm10220K7N660 267 aa16.23■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Brms1Q99N20 246 aa16.23■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Speer4bQ9D9F7 267 aa16.23■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Rbm27Q5SFM8 1060 aaKnown RBP16.23■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Atxn3Q9CVD2 355 aa16.23■□□□□ 0.19
Col3a1-201ENSMUST00000087883 ScaperF8VQ70 1398 aaKnown RBP16.23■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Stx1aO35526 288 aa16.23■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Als2cr12Q8BVM7 383 aa16.23■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Ppp1r42Q8R1Z4 357 aa16.23■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Mmel1Q9JLI3 765 aa16.23■□□□□ 0.19
Col3a1-201ENSMUST00000087883 IbtkQ6ZPR6 1352 aaKnown RBP16.23■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Cep55Q8BT07 462 aa16.22■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Arhgef5E9Q7D5 1581 aa16.22■□□□□ 0.19
Col3a1-201ENSMUST00000087883 NrkQ9R0G8 1455 aa16.22■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 54.3 ms