RNA–Protein interactions for RNA: ENSMUST00000084524.3

Prpf4-201, Transcript of U4/U6 small nuclear ribonucleoprotein Prp4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf4, Length 5,223 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf4-201ENSMUST00000084524 TnmdQ9EP64 317 aa10.48□□□□□ -0.73
Prpf4-201ENSMUST00000084524 Cdkn1cP49919 348 aa10.48□□□□□ -0.73
Prpf4-201ENSMUST00000084524 TnikP83510 1323 aa10.47□□□□□ -0.73
Prpf4-201ENSMUST00000084524 Spty2d1Q68FG3 682 aa10.47□□□□□ -0.73
Prpf4-201ENSMUST00000084524 Tmco3Q8BH01 678 aa10.47□□□□□ -0.73
Prpf4-201ENSMUST00000084524 Znf287Q9EQB9 759 aa10.47□□□□□ -0.73
Prpf4-201ENSMUST00000084524 Lmbr1Q9JIT0 490 aa10.47□□□□□ -0.73
Prpf4-201ENSMUST00000084524 Gm10563F6WIE4 79 aa10.47□□□□□ -0.73
Prpf4-201ENSMUST00000084524 Irgm2A0A140LIF8 407 aa10.47□□□□□ -0.73
Prpf4-201ENSMUST00000084524 Dctn1O08788 1281 aa10.47□□□□□ -0.73
Prpf4-201ENSMUST00000084524 Babam1Q3UI43 333 aa10.47□□□□□ -0.73
Prpf4-201ENSMUST00000084524 AidaQ8C4Q6 305 aa10.47□□□□□ -0.73
Prpf4-201ENSMUST00000084524 Aldh1l1Q8R0Y6 902 aa10.47□□□□□ -0.73
Prpf4-201ENSMUST00000084524 Samd1D3YXK1 519 aa10.46□□□□□ -0.73
Prpf4-201ENSMUST00000084524 Dnajc2P54103 621 aaKnown RBP10.46□□□□□ -0.73
Prpf4-201ENSMUST00000084524 Znf704Q9ERQ3 566 aa10.46□□□□□ -0.73
Prpf4-201ENSMUST00000084524 Jmjd4Q8BFT6 427 aa10.46□□□□□ -0.73
Prpf4-201ENSMUST00000084524 Abcc5Q9R1X5 1436 aa10.46□□□□□ -0.73
Prpf4-201ENSMUST00000084524 Rfx7F8VPJ6 1459 aa10.46□□□□□ -0.73
Prpf4-201ENSMUST00000084524 Samd9lQ69Z37 1561 aa10.46□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Cep112Q5PR68 954 aa10.46□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Pms1Q8K119 917 aa10.46□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Klc3Q91W40 508 aa10.46□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Bicdl1A0JNT9 577 aa10.46□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Pnmal2G3X9N3 661 aa10.46□□□□□ -0.74
Prpf4-201ENSMUST00000084524 MycnP03966 462 aaKnown RBP10.46□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Dusp9Q7TNL7 452 aa10.46□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Slc5a1Q8C3K6 665 aa10.46□□□□□ -0.74
Prpf4-201ENSMUST00000084524 EappQ5BU09 281 aa10.45□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Fam13aQ8BGI4 693 aa10.45□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Abca5Q8K448 1642 aa10.45□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Rufy2Q8R4C2 606 aa10.45□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Maco1Q7TQE6 664 aaKnown RBP10.45□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Rrs1Q9CYH6 365 aaKnown RBP10.45□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Lrrfip1Q3UZ39 729 aaKnown RBP10.45□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Nol11Q8BJW5 723 aaKnown RBP10.45□□□□□ -0.74
Prpf4-201ENSMUST00000084524 NinlQ6ZQ12 1394 aa10.45□□□□□ -0.74
Prpf4-201ENSMUST00000084524 NefhP19246 1090 aa10.45□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Nat10Q8K224 1024 aaKnown RBP10.45□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Pprc1Q6NZN1 1644 aa10.45□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Grin2aP35436 1464 aa10.45□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Eif5P59325 429 aaKnown RBP10.44□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Vps37dQ810I0 261 aa10.44□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Phldb2Q8K1N2 1249 aa10.44□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Pde4dQ01063 747 aa10.44□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Stxbp4Q9WV89 557 aa10.44□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Polr3aB2RXC6 1390 aa10.44□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Slc7a3P70423 618 aa10.44□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Wwc1Q5SXA9 1104 aa10.44□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Erlin2Q8BFZ9 340 aa10.44□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Nap1l5Q9JJF0 156 aa10.44□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Lmtk2Q3TYD6 1471 aa10.44□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Bag1Q60739 355 aa10.44□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Slc26a8Q8R0C3 999 aa10.44□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Galntl5Q9D4M9 431 aa10.44□□□□□ -0.74
Prpf4-201ENSMUST00000084524 GnpatP98192 678 aa10.43□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Ddx58Q6Q899 926 aa10.43□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Adck5Q80V03 582 aa10.43□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Golim4Q8BXA1 655 aa10.43□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Brf1Q8CFK2 676 aa10.43□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Slc5a4bQ91ZP4 660 aa10.43□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Cfap45Q9D9U9 551 aa10.43□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Naip5Q9R016 1403 aa10.43□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Atp10dQ8K2X1 1416 aa10.43□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Cfap58B2RW38 873 aa10.43□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Taok2Q6ZQ29 1240 aa10.43□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Slc13a4Q8BZ82 625 aa10.43□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Fam135aQ6NS59 1506 aa10.43□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Mctp1E9PV86 951 aa10.43□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Strn4P58404 760 aa10.43□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Egfem1Q8C088 590 aa10.43□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Med4Q9CQA5 270 aa10.43□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Sptbn5F6UCX4 1208 aa10.43□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Abcd1P48410 736 aa10.43□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Nup88Q8CEC0 753 aaKnown RBP10.43□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Ipo4Q8VI75 1082 aa10.43□□□□□ -0.74
Prpf4-201ENSMUST00000084524 DroshaQ5HZJ0 1373 aaKnown RBP10.43□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Ccdc172Q810N9 267 aa10.42□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Ccdc39Q9D5Y1 937 aa10.42□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Gapvd1Q6PAR5 1458 aa10.42□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Ppm1eQ80TL0 749 aa10.42□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Idi2Q8BFZ6 227 aa10.42□□□□□ -0.74
Prpf4-201ENSMUST00000084524 TimelessQ9R1X4 1197 aa10.42□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Larp1Q6ZQ58 1072 aaKnown RBP10.42□□□□□ -0.74
Prpf4-201ENSMUST00000084524 TxlnbQ8VBT1 685 aa10.42□□□□□ -0.74
Prpf4-201ENSMUST00000084524 CenpqQ9CPQ5 267 aa10.42□□□□□ -0.74
Prpf4-201ENSMUST00000084524 GpkowQ56A08 488 aa10.42□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Rbm27Q5SFM8 1060 aaKnown RBP10.42□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Ppip5k2Q6ZQB6 1129 aa10.42□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Olfml1Q8BSH2 233 aa10.41□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Ccdc178Q8CDV0 866 aa10.41□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Iqca1Q9CUL5 857 aa10.41□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Pmfbp1Q9WVQ0 1022 aa10.41□□□□□ -0.74
Prpf4-201ENSMUST00000084524 ArsiQ32KI9 573 aa10.41□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Hs1bp3Q3TC93 395 aa10.41□□□□□ -0.74
Prpf4-201ENSMUST00000084524 AI481877A2ALV5 1481 aa10.41□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Ccne1Q61457 408 aa10.41□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Tnni2P13412 182 aa10.41□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Sall3Q62255 1320 aa10.4□□□□□ -0.74
Prpf4-201ENSMUST00000084524 Nup133Q8R0G9 1155 aa10.4□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms