RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 CastP51125 788 aa17.33■□□□□ 0.36
Pcdh20-201ENSMUST00000061628 Magi1Q6RHR9 1471 aa17.33■□□□□ 0.36
Pcdh20-201ENSMUST00000061628 Pip4k2bQ80XI4 416 aa17.33■□□□□ 0.36
Pcdh20-201ENSMUST00000061628 Slc13a4Q8BZ82 625 aa17.33■□□□□ 0.36
Pcdh20-201ENSMUST00000061628 Otud6bQ8K2H2 294 aa17.33■□□□□ 0.36
Pcdh20-201ENSMUST00000061628 Mlh3A0A1Y7VMP7 1443 aa17.32■□□□□ 0.36
Pcdh20-201ENSMUST00000061628 TchhA0A0B4J1F9 1599 aa17.32■□□□□ 0.36
Pcdh20-201ENSMUST00000061628 Fam13aQ8BGI4 693 aa17.32■□□□□ 0.36
Pcdh20-201ENSMUST00000061628 AidaQ8C4Q6 305 aa17.32■□□□□ 0.36
Pcdh20-201ENSMUST00000061628 Larp1bA0A0A6YXJ7 370 aaKnown RBP17.32■□□□□ 0.36
Pcdh20-201ENSMUST00000061628 ImpactO55091 318 aa17.32■□□□□ 0.36
Pcdh20-201ENSMUST00000061628 Smc5Q8CG46 1101 aaKnown RBP17.32■□□□□ 0.36
Pcdh20-201ENSMUST00000061628 Gps2Q921N8 327 aa17.32■□□□□ 0.36
Pcdh20-201ENSMUST00000061628 Ccdc39Q9D5Y1 937 aa17.32■□□□□ 0.36
Pcdh20-201ENSMUST00000061628 Znf287Q9EQB9 759 aa17.32■□□□□ 0.36
Pcdh20-201ENSMUST00000061628 Fkbp5Q64378 456 aa17.31■□□□□ 0.36
Pcdh20-201ENSMUST00000061628 HnrnpmQ9D0E1 729 aaKnown RBP17.31■□□□□ 0.36
Pcdh20-201ENSMUST00000061628 Lamb3Q61087 1168 aa17.31■□□□□ 0.36
Pcdh20-201ENSMUST00000061628 Slu7Q8BHJ9 585 aa17.31■□□□□ 0.36
Pcdh20-201ENSMUST00000061628 Pafah1b1P63005 410 aaKnown RBP17.3■□□□□ 0.36
Pcdh20-201ENSMUST00000061628 NexmifQ5DTT1 1515 aa17.3■□□□□ 0.36
Pcdh20-201ENSMUST00000061628 Spty2d1Q68FG3 682 aa17.29■□□□□ 0.36
Pcdh20-201ENSMUST00000061628 Nap1l5Q9JJF0 156 aa17.29■□□□□ 0.36
Pcdh20-201ENSMUST00000061628 Nap1l2P51860 460 aa17.29■□□□□ 0.36
Pcdh20-201ENSMUST00000061628 Cfap69Q8BH53 942 aa17.29■□□□□ 0.36
Pcdh20-201ENSMUST00000061628 Tfip11Q9ERA6 838 aaKnown RBP17.28■□□□□ 0.36
Pcdh20-201ENSMUST00000061628 Stxbp4Q9WV89 557 aa17.28■□□□□ 0.36
Pcdh20-201ENSMUST00000061628 PtprkP35822 1457 aa17.28■□□□□ 0.36
Pcdh20-201ENSMUST00000061628 Ccdc172Q810N9 267 aa17.28■□□□□ 0.36
Pcdh20-201ENSMUST00000061628 Brf1Q8CFK2 676 aa17.28■□□□□ 0.36
Pcdh20-201ENSMUST00000061628 IkQ9Z1M8 557 aaKnown RBP17.28■□□□□ 0.36
Pcdh20-201ENSMUST00000061628 ItpripQ3TNL8 555 aa17.28■□□□□ 0.36
Pcdh20-201ENSMUST00000061628 MicalclQ9D5U9 680 aa17.28■□□□□ 0.36
Pcdh20-201ENSMUST00000061628 Abcc5Q9R1X5 1436 aa17.28■□□□□ 0.36
Pcdh20-201ENSMUST00000061628 CenphQ9QYM8 241 aa17.28■□□□□ 0.36
Pcdh20-201ENSMUST00000061628 Frmpd1A2AKB4 1549 aa17.27■□□□□ 0.36
Pcdh20-201ENSMUST00000061628 Ddx54Q8K4L0 874 aaKnown RBP17.27■□□□□ 0.36
Pcdh20-201ENSMUST00000061628 Brms1Q99N20 246 aa17.27■□□□□ 0.36
Pcdh20-201ENSMUST00000061628 Trim11Q99PQ2 467 aa17.27■□□□□ 0.36
Pcdh20-201ENSMUST00000061628 TxlnaQ6PAM1 554 aaKnown RBP17.26■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 Nlrp3Q8R4B8 1033 aa17.26■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 Rbm27Q5SFM8 1060 aaKnown RBP17.26■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 Plekhm2Q80TQ5 1018 aa17.26■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 Samm50Q8BGH2 469 aa17.26■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 Iqca1Q9CUL5 857 aa17.26■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 TnikP83510 1323 aa17.26■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 Map3k13Q1HKZ5 959 aa17.26■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 Spag5Q7TME2 1165 aa17.26■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 Slc26a8Q8R0C3 999 aa17.26■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 NcapgE9PWG6 1004 aa17.25■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 Gjb2Q00977 226 aa17.25■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 Mctp2Q5RJH2 878 aa17.25■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 Prm3Q62100 101 aa17.25■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 Strn4P58404 760 aa17.25■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 Q3UJC8 639 aa17.25■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 Anapc15-psA0A140T8L6 141 aa17.25■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 NgdnQ9DB96 315 aaKnown RBP17.25■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 L3mbtl2P59178 703 aa17.24■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 Ell2Q3UKU1 639 aa17.24■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 Rbm10Q99KG3 930 aaKnown RBP17.24■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 Gnl2Q99LH1 728 aaKnown RBP17.24■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 Ncoa1P70365 1447 aa17.24■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 Plb1Q3TTY0 1478 aa17.24■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 Pde4bB1AWC9 736 aa17.24■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 Hdgfl1Q2VPR5 283 aa17.24■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 Prkar2bP31324 416 aa17.24■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 SynmQ70IV5 1561 aa17.24■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 Mipol1Q9D9F8 279 aa17.24■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 Syce3B5KM66 88 aa17.23■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 Ppp1r42Q8R1Z4 357 aa17.23■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 Dnajc2P54103 621 aaKnown RBP17.23■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 Ankib1Q6ZPS6 1085 aa17.23■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 Camsap1A2AHC3 1581 aa17.23■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 Ddx58Q6Q899 926 aa17.23■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 ZwintQ9CQU5 252 aa17.23■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 Ccdc150Q8CDI7 1110 aa17.22■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 Cep55Q8BT07 462 aa17.22■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 ApobrQ8VBT6 942 aa17.22■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 Abcf1Q6P542 837 aaKnown RBP17.22■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 Bag3Q9JLV1 577 aaKnown RBP17.22■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 Slc7a3P70423 618 aa17.22■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 Gbp4Q61107 620 aa17.22■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 Tspyl2Q7TQI8 677 aa17.21■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 Pik3r4Q8VD65 1358 aa17.21■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 Fam135aQ6NS59 1506 aa17.21■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 Rsph6aQ8CDR2 708 aa17.21■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 Smtnl1Q99LM3 459 aa17.21■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 Pcf11G3X9Z4 1553 aa17.21■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 Phlpp2Q8BXA7 1320 aa17.21■□□□□ 0.35
Pcdh20-201ENSMUST00000061628 Cers3Q1A3B0 383 aa17.21■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Rnf41Q8BH75 317 aa17.2■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Ankrd1Q9CR42 319 aa17.2■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 IbspQ61711 324 aa17.2■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Ncbp3Q8BZR9 615 aaKnown RBP17.2■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Rrs1Q9CYH6 365 aaKnown RBP17.2■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 PaskQ8CEE6 1383 aa17.2■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Limch1Q3UH68 1057 aa17.2■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Tmem87bQ8BKU8 555 aa17.2■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Ift57Q8BXG3 429 aa17.2■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Nol7Q9D7Z3 254 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 48.1 ms