RNA–Protein interactions for RNA: ENSMUST00000061209.6

Ccdc71-201, Transcript of Coiled-coil domain-containing protein 71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc71, Length 3,092 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71-201ENSMUST00000061209 Nutm1Q8BHP2 1126 aa16.74■□□□□ 0.27
Ccdc71-201ENSMUST00000061209 Ppp1r3fQ9JIG4 799 aa16.74■□□□□ 0.27
Ccdc71-201ENSMUST00000061209 Slc4a3P16283 1227 aa16.73■□□□□ 0.27
Ccdc71-201ENSMUST00000061209 Ptpn23Q6PB44 1692 aa16.73■□□□□ 0.27
Ccdc71-201ENSMUST00000061209 Tspyl2Q7TQI8 677 aa16.73■□□□□ 0.27
Ccdc71-201ENSMUST00000061209 Aplp1Q03157 653 aa16.73■□□□□ 0.27
Ccdc71-201ENSMUST00000061209 Ccdc155Q80VJ8 648 aa16.73■□□□□ 0.27
Ccdc71-201ENSMUST00000061209 Q3TQI7 289 aaKnown RBP16.72■□□□□ 0.27
Ccdc71-201ENSMUST00000061209 Speer4bQ9D9F7 267 aa16.72■□□□□ 0.27
Ccdc71-201ENSMUST00000061209 Nkx2-3P97334 362 aa16.71■□□□□ 0.27
Ccdc71-201ENSMUST00000061209 Plekhm2Q80TQ5 1018 aa16.71■□□□□ 0.27
Ccdc71-201ENSMUST00000061209 Ppp4r2Q0VGB7 417 aa16.71■□□□□ 0.26
Ccdc71-201ENSMUST00000061209 Plekhd1B2RPU2 505 aa16.7■□□□□ 0.26
Ccdc71-201ENSMUST00000061209 Tet3Q8BG87 1668 aa16.7■□□□□ 0.26
Ccdc71-201ENSMUST00000061209 Zmym3Q9JLM4 1370 aa16.7■□□□□ 0.26
Ccdc71-201ENSMUST00000061209 Trim58Q5NCC9 485 aa16.7■□□□□ 0.26
Ccdc71-201ENSMUST00000061209 Robo1O89026 1612 aa16.7■□□□□ 0.26
Ccdc71-201ENSMUST00000061209 Gm21680A0A0G2JGR8 267 aa16.69■□□□□ 0.26
Ccdc71-201ENSMUST00000061209 Chmp7Q8R1T1 451 aa16.69■□□□□ 0.26
Ccdc71-201ENSMUST00000061209 Lrrc59Q922Q8 307 aaKnown RBP16.69■□□□□ 0.26
Ccdc71-201ENSMUST00000061209 Simc1E9Q6E9 1354 aa16.69■□□□□ 0.26
Ccdc71-201ENSMUST00000061209 Siglec1Q62230 1695 aa16.69■□□□□ 0.26
Ccdc71-201ENSMUST00000061209 Sos1Q62245 1319 aa16.69■□□□□ 0.26
Ccdc71-201ENSMUST00000061209 Psrc1Q9D0P7 329 aa16.68■□□□□ 0.26
Ccdc71-201ENSMUST00000061209 Pdzd9Q9D9M4 266 aa16.68■□□□□ 0.26
Ccdc71-201ENSMUST00000061209 Ccdc171E9Q1U1 1324 aa16.68■□□□□ 0.26
Ccdc71-201ENSMUST00000061209 Eno4Q8C042 619 aa16.68■□□□□ 0.26
Ccdc71-201ENSMUST00000061209 Larp1Q6ZQ58 1072 aaKnown RBP16.68■□□□□ 0.26
Ccdc71-201ENSMUST00000061209 4930572O03RikQ8C5Y0 211 aa16.68■□□□□ 0.26
Ccdc71-201ENSMUST00000061209 Btbd11Q6GQW0 1109 aa16.67■□□□□ 0.26
Ccdc71-201ENSMUST00000061209 Slx1bQ8BX32 270 aa16.67■□□□□ 0.26
Ccdc71-201ENSMUST00000061209 KarsQ99MN1 595 aaKnown RBP16.67■□□□□ 0.26
Ccdc71-201ENSMUST00000061209 Bcl2l13P59017 434 aa16.66■□□□□ 0.26
Ccdc71-201ENSMUST00000061209 Aox2Q5SGK3 1345 aa16.66■□□□□ 0.26
Ccdc71-201ENSMUST00000061209 Phkg2Q9DB30 406 aa16.66■□□□□ 0.26
Ccdc71-201ENSMUST00000061209 Slit2Q9R1B9 1521 aa16.65■□□□□ 0.26
Ccdc71-201ENSMUST00000061209 Chpf2Q3UU43 768 aa16.65■□□□□ 0.26
Ccdc71-201ENSMUST00000061209 Gm21663A0A0G2JE01 267 aa16.65■□□□□ 0.26
Ccdc71-201ENSMUST00000061209 Gm7361D3Z6R1 267 aa16.65■□□□□ 0.26
Ccdc71-201ENSMUST00000061209 5031410I06RikE9Q4E0 267 aa16.65■□□□□ 0.26
Ccdc71-201ENSMUST00000061209 Gm1979E9QAN3 267 aa16.65■□□□□ 0.26
Ccdc71-201ENSMUST00000061209 Gm5862K7N5V5 267 aa16.65■□□□□ 0.26
Ccdc71-201ENSMUST00000061209 Gm10220K7N660 267 aa16.65■□□□□ 0.26
Ccdc71-201ENSMUST00000061209 Wdr43Q6ZQL4 677 aaKnown RBP16.65■□□□□ 0.26
Ccdc71-201ENSMUST00000061209 Q3UPC7 1272 aa16.64■□□□□ 0.25
Ccdc71-201ENSMUST00000061209 Cyp2d12Q8BVD2 504 aa16.64■□□□□ 0.25
Ccdc71-201ENSMUST00000061209 Bcl9lQ67FY2 1494 aa16.64■□□□□ 0.25
Ccdc71-201ENSMUST00000061209 Foxp4Q9DBY0 795 aaKnown RBP16.64■□□□□ 0.25
Ccdc71-201ENSMUST00000061209 Pard3Q99NH2 1333 aa16.63■□□□□ 0.25
Ccdc71-201ENSMUST00000061209 Fkbp4P30416 458 aa16.63■□□□□ 0.25
Ccdc71-201ENSMUST00000061209 Aifm3Q3TY86 605 aa16.63■□□□□ 0.25
Ccdc71-201ENSMUST00000061209 Asic4Q7TNS7 539 aa16.63■□□□□ 0.25
Ccdc71-201ENSMUST00000061209 Maco1Q7TQE6 664 aaKnown RBP16.63■□□□□ 0.25
Ccdc71-201ENSMUST00000061209 Ahnak2E9PYB0 1738 aaKnown RBP16.62■□□□□ 0.25
Ccdc71-201ENSMUST00000061209 Abca15E9PWH4 1668 aa16.62■□□□□ 0.25
Ccdc71-201ENSMUST00000061209 Ric3Q8BPM6 367 aa16.61■□□□□ 0.25
Ccdc71-201ENSMUST00000061209 Slc5a1Q8C3K6 665 aa16.61■□□□□ 0.25
Ccdc71-201ENSMUST00000061209 Armcx1Q9CX83 456 aa16.61■□□□□ 0.25
Ccdc71-201ENSMUST00000061209 Nsd3Q6P2L6 1439 aa16.61■□□□□ 0.25
Ccdc71-201ENSMUST00000061209 Slit1Q80TR4 1531 aa16.61■□□□□ 0.25
Ccdc71-201ENSMUST00000061209 Sf3b2Q3UJB0 878 aaKnown RBP16.61■□□□□ 0.25
Ccdc71-201ENSMUST00000061209 Eif3bQ8JZQ9 803 aaKnown RBP16.61■□□□□ 0.25
Ccdc71-201ENSMUST00000061209 Zeb2Q9R0G7 1215 aa16.61■□□□□ 0.25
Ccdc71-201ENSMUST00000061209 Prkrip1Q9CWV6 186 aaKnown RBP16.61■□□□□ 0.25
Ccdc71-201ENSMUST00000061209 Mbd3Q9Z2D8 285 aaKnown RBP16.61■□□□□ 0.25
Ccdc71-201ENSMUST00000061209 Sv2bQ8BG39 683 aa16.6■□□□□ 0.25
Ccdc71-201ENSMUST00000061209 Fam83gQ5SWY7 812 aa16.6■□□□□ 0.25
Ccdc71-201ENSMUST00000061209 Nyap1Q6PFX7 833 aa16.6■□□□□ 0.25
Ccdc71-201ENSMUST00000061209 Nup153E9Q3G8 1462 aaKnown RBP16.59■□□□□ 0.25
Ccdc71-201ENSMUST00000061209 Ccdc129Q14B48 1034 aa16.59■□□□□ 0.25
Ccdc71-201ENSMUST00000061209 Eif4a1P60843 406 aaKnown RBP16.59■□□□□ 0.25
Ccdc71-201ENSMUST00000061209 Chl1P70232 1209 aa16.58■□□□□ 0.24
Ccdc71-201ENSMUST00000061209 Aldh1l1Q8R0Y6 902 aa16.58■□□□□ 0.24
Ccdc71-201ENSMUST00000061209 Arfgef2A2A5R2 1792 aa16.57■□□□□ 0.24
Ccdc71-201ENSMUST00000061209 Sema6bO54951 886 aa16.56■□□□□ 0.24
Ccdc71-201ENSMUST00000061209 Duxf3A0A0N4SV92 674 aa16.56■□□□□ 0.24
Ccdc71-201ENSMUST00000061209 Cluap1Q8R3P7 413 aa16.55■□□□□ 0.24
Ccdc71-201ENSMUST00000061209 MypopQ8R4U1 393 aa16.55■□□□□ 0.24
Ccdc71-201ENSMUST00000061209 Dbr1Q923B1 550 aa16.55■□□□□ 0.24
Ccdc71-201ENSMUST00000061209 1700123L14RikQ3V2K7 440 aa16.55■□□□□ 0.24
Ccdc71-201ENSMUST00000061209 Supt16hQ920B9 1047 aa16.55■□□□□ 0.24
Ccdc71-201ENSMUST00000061209 Abcc12Q80WJ6 1366 aa16.55■□□□□ 0.24
Ccdc71-201ENSMUST00000061209 Atf5O70191 283 aa16.54■□□□□ 0.24
Ccdc71-201ENSMUST00000061209 PigbQ9JJQ0 542 aa16.54■□□□□ 0.24
Ccdc71-201ENSMUST00000061209 Trpm3Q5F4S9 1721 aa16.54■□□□□ 0.24
Ccdc71-201ENSMUST00000061209 Cnnm1Q0GA42 951 aa16.53■□□□□ 0.24
Ccdc71-201ENSMUST00000061209 ApobrQ8VBT6 942 aa16.53■□□□□ 0.24
Ccdc71-201ENSMUST00000061209 GckrQ91X44 587 aa16.53■□□□□ 0.24
Ccdc71-201ENSMUST00000061209 Exoc5Q3TPX4 708 aa16.53■□□□□ 0.24
Ccdc71-201ENSMUST00000061209 Ccnl1Q52KE7 532 aaKnown RBP16.53■□□□□ 0.24
Ccdc71-201ENSMUST00000061209 B4galnt3Q6L8S8 986 aa16.53■□□□□ 0.24
Ccdc71-201ENSMUST00000061209 Igsf1Q7TQA1 1317 aa16.53■□□□□ 0.24
Ccdc71-201ENSMUST00000061209 Elp1Q7TT37 1333 aaKnown RBP16.53■□□□□ 0.24
Ccdc71-201ENSMUST00000061209 MarsQ68FL6 902 aaKnown RBP16.52■□□□□ 0.24
Ccdc71-201ENSMUST00000061209 Sgsm1Q8BPQ7 1093 aa16.52■□□□□ 0.24
Ccdc71-201ENSMUST00000061209 Zfp142G5E869 1843 aa16.52■□□□□ 0.24
Ccdc71-201ENSMUST00000061209 Cavin2Q63918 418 aaKnown RBP16.52■□□□□ 0.23
Ccdc71-201ENSMUST00000061209 Nolc1E9Q5C9 702 aaKnown RBP16.51■□□□□ 0.23
Ccdc71-201ENSMUST00000061209 Sik1Q60670 779 aa16.51■□□□□ 0.23
Ccdc71-201ENSMUST00000061209 Tns2Q8CGB6 1400 aa16.51■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 34.1 ms