RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Dzip1Q8BMD2 852 aa11.89□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Ipo7Q9EPL8 1038 aaKnown RBP11.89□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Col17a1Q07563 1470 aa11.89□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Hmox1P14901 289 aa11.89□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Zcchc11B2RX14 1644 aaKnown RBP11.89□□□□□ -0.51
Ldlr-201ENSMUST00000034713 AppP12023 770 aa11.89□□□□□ -0.51
Ldlr-201ENSMUST00000034713 AnkarA2RT91 1465 aa11.89□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Fkbp4P30416 458 aa11.88□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Ggnbp2Q5SV77 696 aa11.88□□□□□ -0.51
Ldlr-201ENSMUST00000034713 NexnQ7TPW1 607 aa11.88□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Chd1P40201 1711 aa11.88□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Ak9G3UYQ4 1894 aa11.88□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Anp32eP97822 260 aaKnown RBP11.88□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Clstn1Q9EPL2 979 aa11.88□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Pola1P33609 1465 aa11.88□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Rapgef3Q8VCC8 918 aa11.87□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Acsbg1Q99PU5 721 aa11.87□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Fndc1E9Q043 1732 aa11.87□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Atf7ipQ7TT18 1306 aa11.87□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Mphosph10Q810V0 681 aaKnown RBP11.87□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Btbd11Q6GQW0 1109 aa11.87□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Chmp4cQ9D7F7 232 aa11.87□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Polr3gQ6NXY9 223 aa11.86□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Rec8Q8C5S7 591 aa11.86□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Fam50bQ9WTJ8 334 aa11.86□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Gabpb2P81069 414 aa11.86□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Trpm2Q91YD4 1506 aa11.86□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Elp1Q7TT37 1333 aaKnown RBP11.86□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Gm32742A0A1B0GT42 1604 aa11.86□□□□□ -0.51
Ldlr-201ENSMUST00000034713 AU022751B1B0V2 589 aa11.86□□□□□ -0.51
Ldlr-201ENSMUST00000034713 ImpactO55091 318 aa11.86□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Gnai2P08752 355 aaKnown RBP11.86□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Paxip1Q6NZQ4 1056 aa11.85□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Flad1Q8R123 492 aa11.85□□□□□ -0.51
Ldlr-201ENSMUST00000034713 SrrtQ99MR6 875 aaKnown RBP11.85□□□□□ -0.51
Ldlr-201ENSMUST00000034713 MvpQ9EQK5 861 aa11.85□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Nphp1Q9QY53 687 aa11.85□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Q8C5K5 320 aa11.85□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Mad1l1Q9WTX8 717 aaKnown RBP11.85□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Map3k19E9Q3S4 1311 aa11.85□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Clasp1Q80TV8 1535 aaKnown RBP11.85□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Fbln2P37889 1221 aa11.85□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Slain2Q8CI08 581 aa11.85□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Tarbp1E9Q368 1579 aa11.85□□□□□ -0.51
Ldlr-201ENSMUST00000034713 NcapgE9PWG6 1004 aa11.85□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Gm21969J3QJZ1 289 aa11.85□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Pdcl2Q78Y63 240 aa11.85□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Phlpp2Q8BXA7 1320 aa11.84□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Cplx1P63040 134 aa11.84□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Znhit6Q3UFB2 460 aaKnown RBP11.84□□□□□ -0.51
Ldlr-201ENSMUST00000034713 CarsQ9ER72 831 aaKnown RBP11.84□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Plekhg1F6S200 1446 aa11.84□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Ppip5k2Q6ZQB6 1129 aa11.84□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Med4Q9CQA5 270 aa11.84□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Cfap99A0A140LIX9 648 aa11.84□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Scaf1Q5U4C3 1256 aaKnown RBP11.84□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Mns1Q61884 491 aa11.84□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Zrsr2Q62377 462 aaKnown RBP11.84□□□□□ -0.51
Ldlr-201ENSMUST00000034713 ApobrQ8VBT6 942 aa11.84□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Q9D9S1 216 aa11.83□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Hap1O35668 628 aa11.83□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Myom2Q14BI5 1463 aa11.83□□□□□ -0.52
Ldlr-201ENSMUST00000034713 AglF8VPN4 1532 aa11.83□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Olfml1Q8BSH2 233 aa11.83□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Aldh1l1Q8R0Y6 902 aa11.83□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Tomm22Q9CPQ3 142 aa11.83□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Stard3nlQ9DCI3 235 aa11.83□□□□□ -0.52
Ldlr-201ENSMUST00000034713 PaskQ8CEE6 1383 aa11.83□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Zmym4A2A791 1549 aaKnown RBP11.82□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Dmrt2Q8BG36 561 aa11.82□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Cwc15Q9JHS9 229 aaKnown RBP11.82□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Tspyl2Q7TQI8 677 aa11.82□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Eif3aP23116 1344 aaKnown RBP11.82□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Gtf3c5Q8R2T8 520 aa11.82□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Pprc1Q6NZN1 1644 aa11.82□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Stk11ipQ3TAA7 1072 aa11.82□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Uspl1Q3ULM6 1089 aa11.82□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Fam13bQ8K2H3 851 aa11.82□□□□□ -0.52
Ldlr-201ENSMUST00000034713 ScaperF8VQ70 1398 aaKnown RBP11.82□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Pnmal2G3X9N3 661 aa11.81□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Usp48Q3V0C5 1052 aa11.81□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Slc5a1Q8C3K6 665 aa11.81□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Rbm10Q99KG3 930 aaKnown RBP11.81□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Rad17Q6NXW6 688 aa11.81□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Dot1lQ6XZL8 1540 aa11.81□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Znf335A2A5K6 1337 aa11.81□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Gcom1E9PZ54 550 aa11.81□□□□□ -0.52
Ldlr-201ENSMUST00000034713 MyzapQ3UIJ9 466 aa11.81□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Tpm4Q6IRU2 248 aa11.81□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Rsph6aQ8CDR2 708 aa11.81□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Atxn3Q9CVD2 355 aa11.81□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Cavin1O54724 392 aa11.8□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Maco1Q7TQE6 664 aaKnown RBP11.8□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Hmgb2P30681 210 aaKnown RBP11.8□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Tmem132eQ6IEE6 982 aa11.8□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Dnaaf4Q8R368 420 aa11.8□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Cadps2Q8BYR5 1297 aa11.8□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Pik3r4Q8VD65 1358 aa11.8□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Eva1cP58659 440 aa11.8□□□□□ -0.52
Ldlr-201ENSMUST00000034713 Tbc1d32Q3URV1 1296 aa11.8□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 16.4 ms