RNA–Protein interactions for RNA: ENSMUST00000034245.15

Usb1-201, Transcript of U6 snRNA phosphodiesterase, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usb1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1-201ENSMUST00000034245 Ggt6Q6PDE7 497 aa21.52■■□□□ 1.04
Usb1-201ENSMUST00000034245 Abcc12Q80WJ6 1366 aa21.51■■□□□ 1.03
Usb1-201ENSMUST00000034245 Snap23O09044 210 aa21.51■■□□□ 1.03
Usb1-201ENSMUST00000034245 Ggnbp2Q5SV77 696 aa21.5■■□□□ 1.03
Usb1-201ENSMUST00000034245 Ccdc60Q8C4J0 545 aa21.49■■□□□ 1.03
Usb1-201ENSMUST00000034245 Apbb1Q9QXJ1 710 aa21.49■■□□□ 1.03
Usb1-201ENSMUST00000034245 Aox2Q5SGK3 1345 aa21.49■■□□□ 1.03
Usb1-201ENSMUST00000034245 FocadA2AKG8 1798 aa21.49■■□□□ 1.03
Usb1-201ENSMUST00000034245 Klhdc4Q921I2 584 aa21.48■■□□□ 1.03
Usb1-201ENSMUST00000034245 NeflP08551 543 aa21.48■■□□□ 1.03
Usb1-201ENSMUST00000034245 Fam50bQ9WTJ8 334 aa21.48■■□□□ 1.03
Usb1-201ENSMUST00000034245 Gm6268A2A3U9 297 aa21.47■■□□□ 1.03
Usb1-201ENSMUST00000034245 Prim1P20664 417 aa21.47■■□□□ 1.03
Usb1-201ENSMUST00000034245 Vamp4O70480 141 aa21.46■■□□□ 1.03
Usb1-201ENSMUST00000034245 G3bp1P97855 465 aaKnown RBP21.46■■□□□ 1.03
Usb1-201ENSMUST00000034245 Mbd3Q9Z2D8 285 aaKnown RBP21.46■■□□□ 1.03
Usb1-201ENSMUST00000034245 Chmp7Q8R1T1 451 aa21.46■■□□□ 1.03
Usb1-201ENSMUST00000034245 Phkg2Q9DB30 406 aa21.45■■□□□ 1.02
Usb1-201ENSMUST00000034245 Senp3Q9EP97 568 aaKnown RBP21.45■■□□□ 1.02
Usb1-201ENSMUST00000034245 Eif3bQ8JZQ9 803 aaKnown RBP21.44■■□□□ 1.02
Usb1-201ENSMUST00000034245 Pdzd9Q9D9M4 266 aa21.44■■□□□ 1.02
Usb1-201ENSMUST00000034245 Foxp4Q9DBY0 795 aaKnown RBP21.43■■□□□ 1.02
Usb1-201ENSMUST00000034245 Igsf1Q7TQA1 1317 aa21.43■■□□□ 1.02
Usb1-201ENSMUST00000034245 1700019A02RikA0A087WPV9 146 aa21.43■■□□□ 1.02
Usb1-201ENSMUST00000034245 Trim58Q5NCC9 485 aa21.43■■□□□ 1.02
Usb1-201ENSMUST00000034245 Tns2Q8CGB6 1400 aa21.42■■□□□ 1.02
Usb1-201ENSMUST00000034245 Speer4bQ9D9F7 267 aa21.42■■□□□ 1.02
Usb1-201ENSMUST00000034245 Emilin2Q8K482 1074 aa21.41■■□□□ 1.02
Usb1-201ENSMUST00000034245 Pibf1E9Q6K3 756 aa21.41■■□□□ 1.02
Usb1-201ENSMUST00000034245 Plekhm2Q80TQ5 1018 aa21.4■■□□□ 1.02
Usb1-201ENSMUST00000034245 KarsQ99MN1 595 aaKnown RBP21.4■■□□□ 1.02
Usb1-201ENSMUST00000034245 Adgrb1Q3UHD1 1582 aa21.39■■□□□ 1.02
Usb1-201ENSMUST00000034245 Cavin2Q63918 418 aaKnown RBP21.39■■□□□ 1.01
Usb1-201ENSMUST00000034245 Ssfa2Q922B9 1252 aa21.39■■□□□ 1.01
Usb1-201ENSMUST00000034245 Gm21680A0A0G2JGR8 267 aa21.38■■□□□ 1.01
Usb1-201ENSMUST00000034245 Q3TQI7 289 aaKnown RBP21.38■■□□□ 1.01
Usb1-201ENSMUST00000034245 Btbd11Q6GQW0 1109 aa21.38■■□□□ 1.01
Usb1-201ENSMUST00000034245 Pm20d1Q8C165 503 aa21.36■■□□□ 1.01
Usb1-201ENSMUST00000034245 Tnks1bp1P58871 1720 aa21.36■■□□□ 1.01
Usb1-201ENSMUST00000034245 SafbD3YXK2 937 aaKnown RBP21.36■■□□□ 1.01
Usb1-201ENSMUST00000034245 Asic4Q7TNS7 539 aa21.36■■□□□ 1.01
Usb1-201ENSMUST00000034245 Tmco5bQ80X59 307 aa21.36■■□□□ 1.01
Usb1-201ENSMUST00000034245 Pank1Q8K4K6 548 aa21.35■■□□□ 1.01
Usb1-201ENSMUST00000034245 Ginm1Q91WR6 327 aa21.35■■□□□ 1.01
Usb1-201ENSMUST00000034245 Gm21663A0A0G2JE01 267 aa21.34■■□□□ 1.01
Usb1-201ENSMUST00000034245 Gm7361D3Z6R1 267 aa21.34■■□□□ 1.01
Usb1-201ENSMUST00000034245 5031410I06RikE9Q4E0 267 aa21.34■■□□□ 1.01
Usb1-201ENSMUST00000034245 Gm1979E9QAN3 267 aa21.34■■□□□ 1.01
Usb1-201ENSMUST00000034245 Gm5862K7N5V5 267 aa21.34■■□□□ 1.01
Usb1-201ENSMUST00000034245 Gm10220K7N660 267 aa21.34■■□□□ 1.01
Usb1-201ENSMUST00000034245 Slc5a1Q8C3K6 665 aa21.34■■□□□ 1.01
Usb1-201ENSMUST00000034245 Elp1Q7TT37 1333 aaKnown RBP21.34■■□□□ 1.01
Usb1-201ENSMUST00000034245 CenpbP27790 599 aa21.33■■□□□ 1.01
Usb1-201ENSMUST00000034245 Kcnh4A2A5F7 1018 aa21.33■■□□□ 1
Usb1-201ENSMUST00000034245 Rangap1P46061 589 aaKnown RBP21.33■■□□□ 1
Usb1-201ENSMUST00000034245 Ccdc129Q14B48 1034 aa21.33■■□□□ 1
Usb1-201ENSMUST00000034245 Psrc1Q9D0P7 329 aa21.33■■□□□ 1
Usb1-201ENSMUST00000034245 Myo5bP21271 1818 aa21.32■■□□□ 1
Usb1-201ENSMUST00000034245 Atf5O70191 283 aa21.32■■□□□ 1
Usb1-201ENSMUST00000034245 Eif4a1P60843 406 aaKnown RBP21.32■■□□□ 1
Usb1-201ENSMUST00000034245 Chl1P70232 1209 aa21.32■■□□□ 1
Usb1-201ENSMUST00000034245 Nkx2-3P97334 362 aa21.32■■□□□ 1
Usb1-201ENSMUST00000034245 Sf3b2Q3UJB0 878 aaKnown RBP21.32■■□□□ 1
Usb1-201ENSMUST00000034245 Nyap1Q6PFX7 833 aa21.32■■□□□ 1
Usb1-201ENSMUST00000034245 Ccdc155Q80VJ8 648 aa21.32■■□□□ 1
Usb1-201ENSMUST00000034245 Nsd3Q6P2L6 1439 aa21.32■■□□□ 1
Usb1-201ENSMUST00000034245 Nectin2P32507 530 aa21.31■■□□□ 1
Usb1-201ENSMUST00000034245 Larp1Q6ZQ58 1072 aaKnown RBP21.31■■□□□ 1
Usb1-201ENSMUST00000034245 AampJ3QN89 436 aa21.31■■□□□ 1
Usb1-201ENSMUST00000034245 InhbeO08717 350 aa21.31■■□□□ 1
Usb1-201ENSMUST00000034245 Sema6bO54951 886 aa21.31■■□□□ 1
Usb1-201ENSMUST00000034245 Chpf2Q3UU43 768 aa21.31■■□□□ 1
Usb1-201ENSMUST00000034245 Prkrip1Q9CWV6 186 aaKnown RBP21.31■■□□□ 1
Usb1-201ENSMUST00000034245 Mst1rQ62190 1378 aa21.3■■□□□ 1
Usb1-201ENSMUST00000034245 Shank2Q80Z38 1476 aa21.29■■□□□ 1
Usb1-201ENSMUST00000034245 Aldh1l1Q8R0Y6 902 aa21.29■■□□□ 1
Usb1-201ENSMUST00000034245 Msh6P54276 1358 aaKnown RBP21.29■■□□□ 1
Usb1-201ENSMUST00000034245 Gm38655A0A286YDK6 273 aa21.28■■□□□ 1
Usb1-201ENSMUST00000034245 Q3UPC7 1272 aa21.28■■□□□ 1
Usb1-201ENSMUST00000034245 Sik1Q60670 779 aa21.28■■□□□ 1
Usb1-201ENSMUST00000034245 Irx6Q9ER75 438 aa21.28■■□□□ 1
Usb1-201ENSMUST00000034245 Cntnap1O54991 1385 aa21.28■■□□□ 1
Usb1-201ENSMUST00000034245 Col1a2Q01149 1372 aa21.28■■□□□ 1
Usb1-201ENSMUST00000034245 Tnnt1O88346 262 aa21.28■■□□□ 1
Usb1-201ENSMUST00000034245 Vps33bP59016 617 aa21.28■■□□□ 1
Usb1-201ENSMUST00000034245 Exoc5Q3TPX4 708 aa21.28■■□□□ 1
Usb1-201ENSMUST00000034245 MarsQ68FL6 902 aaKnown RBP21.28■■□□□ 1
Usb1-201ENSMUST00000034245 Ankrd23Q812A3 306 aa21.27■■□□□ 1
Usb1-201ENSMUST00000034245 Cyp2d12Q8BVD2 504 aa21.27■■□□□ 1
Usb1-201ENSMUST00000034245 Sv2bQ8BG39 683 aa21.26■□□□□ 0.99
Usb1-201ENSMUST00000034245 MypopQ8R4U1 393 aa21.26■□□□□ 0.99
Usb1-201ENSMUST00000034245 PsapQ61207 557 aaKnown RBP21.25■□□□□ 0.99
Usb1-201ENSMUST00000034245 Znf330Q922H9 316 aa21.25■□□□□ 0.99
Usb1-201ENSMUST00000034245 Ric3Q8BPM6 367 aa21.24■□□□□ 0.99
Usb1-201ENSMUST00000034245 Eno4Q8C042 619 aa21.24■□□□□ 0.99
Usb1-201ENSMUST00000034245 Znf521Q6KAS7 1311 aa21.23■□□□□ 0.99
Usb1-201ENSMUST00000034245 Kcnh8P59111 1102 aa21.23■□□□□ 0.99
Usb1-201ENSMUST00000034245 Tspyl2Q7TQI8 677 aa21.23■□□□□ 0.99
Usb1-201ENSMUST00000034245 Taf7Q9R1C0 341 aa21.23■□□□□ 0.99
Usb1-201ENSMUST00000034245 Cnksr1A2A9K7 700 aa21.22■□□□□ 0.99
Retrieved 100 of 22,080 RNA–protein pairs in 30.1 ms