RNA–Protein interactions for RNA: ENSMUST00000021278.13

Ctc1-201, Transcript of CST complex subunit CTC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ctc1, Length 4,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-201ENSMUST00000021278 Filip1lQ6P6L0 1131 aa11.02□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Rapgef3Q8VCC8 918 aa11.02□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Bloc1s4Q8VED2 215 aa11.02□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Psme1P97371 249 aa11.01□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Psmd1Q3TXS7 953 aa11.01□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Ksr2Q3UVC0 959 aa11.01□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Cpa2Q504N0 417 aa11.01□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Trpm2Q91YD4 1506 aa11.01□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Kiaa0556Q8C753 1610 aa11.01□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Prr29B1ARI9 187 aa11.01□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Anp32cQ64G17 123 aa11.01□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Clstn2Q9ER65 966 aa11.01□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Kank1E9Q238 1360 aa11.01□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Zmym4A2A791 1549 aaKnown RBP11.01□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Zfp597E9Q6S0 419 aa11.01□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Pkd2O35245 966 aa11□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Nf2P46662 596 aa11□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Exoc8Q6PGF7 716 aa11□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Rnf187Q8BFX1 236 aa11□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Samm50Q8BGH2 469 aa11□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Cgref1Q8R1U2 281 aa11□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Myo1cQ9WTI7 1063 aa11□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Erbb3Q61526 1339 aa11□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Capn2O08529 700 aa11□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Map9Q3TRR0 646 aa11□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Cep135Q6P5D4 1140 aa11□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Cchcr1Q8K2I2 770 aa11□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Stk26Q99JT2 416 aa11□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Nsfl1cQ9CZ44 370 aaKnown RBP11□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Gabpb2P81069 414 aa11□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Nos1Q9Z0J4 1429 aa11□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Lmtk2Q3TYD6 1471 aa10.99□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Trim58Q5NCC9 485 aa10.99□□□□□ -0.65
Ctc1-201ENSMUST00000021278 SufuQ9Z0P7 484 aa10.99□□□□□ -0.65
Ctc1-201ENSMUST00000021278 RbsnQ80Y56 783 aa10.99□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Ccdc30Q8BVF4 654 aa10.99□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Zcchc17Q9ESX4 241 aaKnown RBP10.99□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Btn2a2A4QPC6 514 aa10.99□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Gadd45bP22339 160 aa10.99□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Trim25Q61510 634 aaKnown RBP10.99□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Pnpla2Q8BJ56 486 aa10.99□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Oas2E9Q9A9 742 aa10.98□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Cpsf2O35218 782 aaKnown RBP10.98□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Znhit6Q3UFB2 460 aaKnown RBP10.98□□□□□ -0.65
Ctc1-201ENSMUST00000021278 R3hcc1Q8BSI6 488 aa10.98□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Golga2Q921M4 999 aa10.98□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Stk11Q9WTK7 436 aa10.98□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Lcmt1A0A0U1RNF2 332 aa10.98□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Fam184aE9PW83 1143 aa10.98□□□□□ -0.65
Ctc1-201ENSMUST00000021278 MccE9PWI3 1003 aa10.98□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Ncbp1Q3UYV9 790 aaKnown RBP10.98□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Atl3Q91YH5 541 aa10.98□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Naip5Q9R016 1403 aa10.98□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Uri1Q3TLD5 531 aa10.98□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Ddx49Q4FZF3 480 aaKnown RBP10.98□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Morc2aQ69ZX6 1030 aa10.98□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Tmc1Q8R4P5 757 aa10.98□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Cdc42bpbQ7TT50 1713 aa10.98□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Tbc1d32Q3URV1 1296 aa10.98□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Ccdc40Q8BI79 1192 aa10.98□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Ccdc186Q8C9S4 917 aa10.98□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Zfp644E9QA22 1323 aa10.97□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Bach2P97303 839 aa10.97□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Mis12Q9CY25 206 aa10.97□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Hmgn5Q9JL35 406 aa10.97□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Tbc1d8Q9Z1A9 1134 aa10.97□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Rtel1Q0VGM9 1203 aa10.97□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Wdr3Q8BHB4 942 aaKnown RBP10.97□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Kif18aQ91WD7 886 aa10.97□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Ftsj3Q9DBE9 838 aaKnown RBP10.97□□□□□ -0.65
Ctc1-201ENSMUST00000021278 ScaperF8VQ70 1398 aaKnown RBP10.97□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Cfap58B2RW38 873 aa10.97□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Arid3aQ62431 601 aa10.97□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Q8VDP2 222 aa10.97□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Pus7B7ZNL8 666 aaKnown RBP10.96□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Dmrtc1Q9D9R7 182 aa10.96□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Zeb2Q9R0G7 1215 aa10.96□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Mad1l1Q9WTX8 717 aaKnown RBP10.96□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Ppp2r3dQ9Z176 491 aa10.96□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Abca6Q8K441 1624 aa10.96□□□□□ -0.65
Ctc1-201ENSMUST00000021278 Kank4Q6P9J5 1016 aa10.96□□□□□ -0.65
Ctc1-201ENSMUST00000021278 CltcQ68FD5 1675 aaKnown RBP10.96□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Brd1E9PZ26 1189 aaKnown RBP10.96□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Pde1cQ64338 706 aa10.96□□□□□ -0.66
Ctc1-201ENSMUST00000021278 E2f4Q8R0K9 410 aa10.96□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Vps18Q8R307 973 aa10.96□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Armc9Q9D2I5 817 aa10.96□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Hecw1Q8K4P8 1604 aa10.95□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Scn4aQ9ER60 1841 aa10.95□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Naa25Q8BWZ3 972 aa10.95□□□□□ -0.66
Ctc1-201ENSMUST00000021278 NaspQ99MD9 773 aaKnown RBP10.95□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Saal1Q9D2C2 474 aa10.95□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Map2k1P31938 393 aa10.95□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Kdm4aQ8BW72 1064 aa10.95□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Smc1bQ920F6 1248 aa10.95□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Kif7B7ZNG0 1348 aa10.94□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Mphosph9A6H5Y1 991 aa10.94□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Fbln2P37889 1221 aa10.94□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Mcm5P49718 733 aa10.94□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Atp6v1dP57746 247 aa10.94□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms