RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 LIMD1Q9UGP4 676 aa13.66□□□□□ -0.22
SCARB2-227ENST00000640957 EVPLQ92817 2033 aa13.66□□□□□ -0.22
SCARB2-227ENST00000640957 IDH3BO43837 385 aa13.66□□□□□ -0.22
SCARB2-227ENST00000640957 DEAF1O75398 565 aaPredicted RBP13.66□□□□□ -0.22
SCARB2-227ENST00000640957 C1RP00736 705 aa13.66□□□□□ -0.22
SCARB2-227ENST00000640957 CD40LGP29965 261 aa13.66□□□□□ -0.22
SCARB2-227ENST00000640957 ATICP31939 592 aa13.66□□□□□ -0.22
SCARB2-227ENST00000640957 GRSF1Q12849 480 aaKnown RBP eCLIP13.66□□□□□ -0.22
SCARB2-227ENST00000640957 CDH17Q12864 832 aa13.66□□□□□ -0.22
SCARB2-227ENST00000640957 STEAP3Q658P3 488 aa13.66□□□□□ -0.22
SCARB2-227ENST00000640957 FRA10AC1Q70Z53 315 aa13.66□□□□□ -0.22
SCARB2-227ENST00000640957 GALNT10Q86SR1 603 aa13.66□□□□□ -0.22
SCARB2-227ENST00000640957 ZDHHC13Q8IUH4 622 aa13.66□□□□□ -0.22
SCARB2-227ENST00000640957 TMEM125Q96AQ2 219 aa13.66□□□□□ -0.22
SCARB2-227ENST00000640957 BDH2Q9BUT1 245 aa13.66□□□□□ -0.22
SCARB2-227ENST00000640957 FSD1LQ9BXM9 530 aa13.66□□□□□ -0.22
SCARB2-227ENST00000640957 HOXD1Q9GZZ0 328 aa13.66□□□□□ -0.22
SCARB2-227ENST00000640957 RUBCNLQ9H714 662 aa13.66□□□□□ -0.22
SCARB2-227ENST00000640957 CD320Q9NPF0 282 aa13.66□□□□□ -0.22
SCARB2-227ENST00000640957 DDIT4Q9NX09 232 aa13.66□□□□□ -0.22
SCARB2-227ENST00000640957 AQP12BA6NM10 295 aa13.65□□□□□ -0.22
SCARB2-227ENST00000640957 LCKP06239 509 aa13.65□□□□□ -0.22
SCARB2-227ENST00000640957 ABCB1P08183 1280 aaPredicted RBP13.65□□□□□ -0.22
SCARB2-227ENST00000640957 NOS2P35228 1153 aa13.65□□□□□ -0.22
SCARB2-227ENST00000640957 CDKN2DP55273 166 aa13.65□□□□□ -0.22
SCARB2-227ENST00000640957 MAP3K7CLP57077 242 aa13.65□□□□□ -0.22
SCARB2-227ENST00000640957 DAB2P98082 770 aa13.65□□□□□ -0.22
SCARB2-227ENST00000640957 PAN2Q504Q3 1202 aaKnown RBP13.65□□□□□ -0.22
SCARB2-227ENST00000640957 STRADAQ7RTN6 431 aa13.65□□□□□ -0.22
SCARB2-227ENST00000640957 AQP12AQ8IXF9 295 aa13.65□□□□□ -0.22
SCARB2-227ENST00000640957 MFSD4AQ8N468 514 aa13.65□□□□□ -0.22
SCARB2-227ENST00000640957 TOP1MTQ969P6 601 aa13.65□□□□□ -0.22
SCARB2-227ENST00000640957 ISL2Q96A47 359 aa13.65□□□□□ -0.22
SCARB2-227ENST00000640957 PTERQ96BW5 349 aa13.65□□□□□ -0.22
SCARB2-227ENST00000640957 CDCA5Q96FF9 252 aa13.65□□□□□ -0.22
SCARB2-227ENST00000640957 PDZD7Q9H5P4 517 aa13.65□□□□□ -0.22
SCARB2-227ENST00000640957 ZNF831Q5JPB2 1677 aa13.65□□□□□ -0.22
SCARB2-227ENST00000640957 XIRP2A4UGR9 3374 aa13.65□□□□□ -0.22
SCARB2-227ENST00000640957 G3V2T6 193 aa13.65□□□□□ -0.22
SCARB2-227ENST00000640957 SLC22A2O15244 555 aa13.65□□□□□ -0.22
SCARB2-227ENST00000640957 UGT2B11O75310 529 aa13.65□□□□□ -0.22
SCARB2-227ENST00000640957 DAB1O75553 588 aa13.65□□□□□ -0.22
SCARB2-227ENST00000640957 RECQL5O94762 991 aaPredicted RBP13.65□□□□□ -0.22
SCARB2-227ENST00000640957 CDK14O94921 469 aa13.65□□□□□ -0.22
SCARB2-227ENST00000640957 CST1P01037 141 aa13.65□□□□□ -0.22
SCARB2-227ENST00000640957 YBX3P16989 372 aaKnown RBP eCLIP13.65□□□□□ -0.22
SCARB2-227ENST00000640957 MBTD1Q05BQ5 628 aa13.65□□□□□ -0.22
SCARB2-227ENST00000640957 TECRLQ5HYJ1 363 aa13.65□□□□□ -0.22
SCARB2-227ENST00000640957 TMEM179BQ7Z7N9 219 aa13.65□□□□□ -0.22
SCARB2-227ENST00000640957 RIOX2Q8IUF8 465 aa13.65□□□□□ -0.22
SCARB2-227ENST00000640957 MMAAQ8IVH4 418 aaKnown RBP13.65□□□□□ -0.22
SCARB2-227ENST00000640957 MCFD2Q8NI22 146 aa13.65□□□□□ -0.22
SCARB2-227ENST00000640957 ITFG1Q8TB96 612 aa13.65□□□□□ -0.22
SCARB2-227ENST00000640957 RORBQ92753 470 aa13.65□□□□□ -0.22
SCARB2-227ENST00000640957 TDRD1Q9BXT4 1180 aaKnown RBP13.65□□□□□ -0.22
SCARB2-227ENST00000640957 RIBC2Q9H4K1 309 aa13.65□□□□□ -0.22
SCARB2-227ENST00000640957 GPN2Q9H9Y4 310 aaPredicted RBP13.65□□□□□ -0.22
SCARB2-227ENST00000640957 FAM118AQ9NWS6 357 aa13.65□□□□□ -0.22
SCARB2-227ENST00000640957 TMEM9Q9P0T7 183 aa13.65□□□□□ -0.22
SCARB2-227ENST00000640957 PIN4Q9Y237 131 aaKnown RBP13.65□□□□□ -0.22
SCARB2-227ENST00000640957 SNX8Q9Y5X2 465 aa13.65□□□□□ -0.22
SCARB2-227ENST00000640957 DNMT3AQ9Y6K1 912 aaPredicted RBP13.65□□□□□ -0.22
SCARB2-227ENST00000640957 OAS3Q9Y6K5 1087 aaKnown RBP13.65□□□□□ -0.22
SCARB2-227ENST00000640957 ASPDHA6ND91 283 aa13.65□□□□□ -0.23
SCARB2-227ENST00000640957 H3BRB1 525 aa13.65□□□□□ -0.23
SCARB2-227ENST00000640957 TBC1D4O60343 1298 aa13.65□□□□□ -0.23
SCARB2-227ENST00000640957 SOAT2O75908 522 aa13.65□□□□□ -0.23
SCARB2-227ENST00000640957 CD4P01730 458 aa13.65□□□□□ -0.23
SCARB2-227ENST00000640957 PIK3CGP48736 1102 aa13.65□□□□□ -0.23
SCARB2-227ENST00000640957 ALDH7A1P49419 539 aaKnown RBP13.65□□□□□ -0.23
SCARB2-227ENST00000640957 GLUD2P49448 558 aa13.65□□□□□ -0.23
SCARB2-227ENST00000640957 KCNK10P57789 538 aa13.65□□□□□ -0.23
SCARB2-227ENST00000640957 DAG1Q14118 895 aa13.65□□□□□ -0.23
SCARB2-227ENST00000640957 NKG7Q16617 165 aa13.65□□□□□ -0.23
SCARB2-227ENST00000640957 UNC50Q53HI1 259 aa13.65□□□□□ -0.23
SCARB2-227ENST00000640957 DTWD1Q8N5C7 304 aa13.65□□□□□ -0.23
SCARB2-227ENST00000640957 TP53I13Q8NBR0 393 aaPredicted RBP13.65□□□□□ -0.23
SCARB2-227ENST00000640957 NCLNQ969V3 563 aa13.65□□□□□ -0.23
SCARB2-227ENST00000640957 BARD1Q99728 777 aaKnown RBP13.65□□□□□ -0.23
SCARB2-227ENST00000640957 RHOBTB2Q9BYZ6 727 aa13.65□□□□□ -0.23
SCARB2-227ENST00000640957 HPS4Q9NQG7 708 aa13.65□□□□□ -0.23
SCARB2-227ENST00000640957 POLG2Q9UHN1 485 aa13.65□□□□□ -0.23
SCARB2-227ENST00000640957 ENPP5Q9UJA9 477 aa13.65□□□□□ -0.23
SCARB2-227ENST00000640957 SARDHQ9UL12 918 aa13.65□□□□□ -0.23
SCARB2-227ENST00000640957 FAM50BQ9Y247 325 aa13.65□□□□□ -0.23
SCARB2-227ENST00000640957 ANKRD6Q9Y2G4 727 aa13.65□□□□□ -0.23
SCARB2-227ENST00000640957 HACD1B0YJ81 288 aa13.64□□□□□ -0.23
SCARB2-227ENST00000640957 DPYSL4O14531 572 aa13.64□□□□□ -0.23
SCARB2-227ENST00000640957 NPHS1O60500 1241 aa13.64□□□□□ -0.23
SCARB2-227ENST00000640957 RFPL2O75678 378 aa13.64□□□□□ -0.23
SCARB2-227ENST00000640957 LGALS2P05162 132 aa13.64□□□□□ -0.23
SCARB2-227ENST00000640957 KRT8P05787 483 aa13.64□□□□□ -0.23
SCARB2-227ENST00000640957 TGFB3P10600 412 aa13.64□□□□□ -0.23
SCARB2-227ENST00000640957 IFI30P13284 250 aa13.64□□□□□ -0.23
SCARB2-227ENST00000640957 AGTR2P50052 363 aa13.64□□□□□ -0.23
SCARB2-227ENST00000640957 LAIR2Q6ISS4 152 aa13.64□□□□□ -0.23
SCARB2-227ENST00000640957 WDR12Q9GZL7 423 aaKnown RBP13.64□□□□□ -0.23
SCARB2-227ENST00000640957 LRRC4Q9HBW1 653 aa13.64□□□□□ -0.23
SCARB2-227ENST00000640957 TRPV5Q9NQA5 729 aa13.64□□□□□ -0.23
SCARB2-227ENST00000640957 ITGB1BP2Q9UKP3 347 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms