RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 ZNF787Q6DD87 383 aa19.84■□□□□ 0.77
TARDBP-228ENST00000629725 PRSS42Q7Z5A4 293 aa19.84■□□□□ 0.77
TARDBP-228ENST00000629725 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.84■□□□□ 0.77
TARDBP-228ENST00000629725 CSPG4P5Q96PW8 444 aa19.84■□□□□ 0.77
TARDBP-228ENST00000629725 FAM83DQ9H4H8 585 aa19.84■□□□□ 0.77
TARDBP-228ENST00000629725 SCHIP1Q9P0W5 487 aaPredicted RBP19.84■□□□□ 0.77
TARDBP-228ENST00000629725 ATXN10Q9UBB4 475 aa19.84■□□□□ 0.77
TARDBP-228ENST00000629725 C1orf232A0A0U1RR37 186 aa19.83■□□□□ 0.77
TARDBP-228ENST00000629725 KIF1CO43896 1103 aaKnown RBP19.83■□□□□ 0.77
TARDBP-228ENST00000629725 ZNF8P17098 575 aaPredicted RBP19.83■□□□□ 0.77
TARDBP-228ENST00000629725 IL1R2P27930 398 aa19.83■□□□□ 0.77
TARDBP-228ENST00000629725 SLC19A1P41440 591 aa19.83■□□□□ 0.77
TARDBP-228ENST00000629725 UGT8Q16880 541 aa19.83■□□□□ 0.77
TARDBP-228ENST00000629725 EIF2S3LQ2VIR3 472 aaKnown RBP19.83■□□□□ 0.77
TARDBP-228ENST00000629725 CPZQ66K79 652 aa19.83■□□□□ 0.77
TARDBP-228ENST00000629725 KLHL6Q8WZ60 621 aa19.83■□□□□ 0.77
TARDBP-228ENST00000629725 HSPH1Q92598 858 aa19.83■□□□□ 0.77
TARDBP-228ENST00000629725 ZDHHC12Q96GR4 267 aa19.83■□□□□ 0.77
TARDBP-228ENST00000629725 LYSMD1Q96S90 227 aa19.83■□□□□ 0.77
TARDBP-228ENST00000629725 TDRD1Q9BXT4 1180 aaKnown RBP19.83■□□□□ 0.77
TARDBP-228ENST00000629725 GPR87Q9BY21 358 aa19.83■□□□□ 0.77
TARDBP-228ENST00000629725 PDE7BQ9NP56 450 aa19.83■□□□□ 0.77
TARDBP-228ENST00000629725 MLXIPLQ9NP71 852 aa19.83■□□□□ 0.77
TARDBP-228ENST00000629725 ACSS2Q9NR19 701 aa19.83■□□□□ 0.77
TARDBP-228ENST00000629725 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.83■□□□□ 0.77
TARDBP-228ENST00000629725 PKD2L2Q9NZM6 624 aa19.83■□□□□ 0.77
TARDBP-228ENST00000629725 ZNF624Q9P2J8 865 aaPredicted RBP19.83■□□□□ 0.77
TARDBP-228ENST00000629725 DOPEY1Q5JWR5 2465 aa19.82■□□□□ 0.76
TARDBP-228ENST00000629725 TCP11X1B4DZS4 312 aa19.82■□□□□ 0.76
TARDBP-228ENST00000629725 TIAF1O95411 115 aa19.82■□□□□ 0.76
TARDBP-228ENST00000629725 NELFEP18615 380 aaKnown RBP19.82■□□□□ 0.76
TARDBP-228ENST00000629725 CA4P22748 312 aa19.82■□□□□ 0.76
TARDBP-228ENST00000629725 CES1P23141 567 aa19.82■□□□□ 0.76
TARDBP-228ENST00000629725 COL8A1P27658 744 aa19.82■□□□□ 0.76
TARDBP-228ENST00000629725 PCK1P35558 622 aa19.82■□□□□ 0.76
TARDBP-228ENST00000629725 CAPZBP47756 277 aa19.82■□□□□ 0.76
TARDBP-228ENST00000629725 CCL11P51671 97 aa19.82■□□□□ 0.76
TARDBP-228ENST00000629725 UBXN1Q04323 297 aa19.82■□□□□ 0.76
TARDBP-228ENST00000629725 IHHQ14623 411 aa19.82■□□□□ 0.76
TARDBP-228ENST00000629725 INPP5JQ15735 1006 aaPredicted RBP19.82■□□□□ 0.76
TARDBP-228ENST00000629725 BOLA3Q53S33 107 aa19.82■□□□□ 0.76
TARDBP-228ENST00000629725 FAM92BQ6ZTR7 304 aa19.82■□□□□ 0.76
TARDBP-228ENST00000629725 MAMDC2Q7Z304 686 aaPredicted RBP19.82■□□□□ 0.76
TARDBP-228ENST00000629725 LRRC49Q8IUZ0 686 aa19.82■□□□□ 0.76
TARDBP-228ENST00000629725 RSC1A1Q92681 617 aa19.82■□□□□ 0.76
TARDBP-228ENST00000629725 ING2Q9H160 280 aa19.82■□□□□ 0.76
TARDBP-228ENST00000629725 OR2AG1Q9H205 316 aa19.82■□□□□ 0.76
TARDBP-228ENST00000629725 ADGRG1Q9Y653 693 aa19.82■□□□□ 0.76
TARDBP-228ENST00000629725 MTA2O94776 668 aa19.81■□□□□ 0.76
TARDBP-228ENST00000629725 PRLP01236 227 aa19.81■□□□□ 0.76
TARDBP-228ENST00000629725 PTPN4P29074 926 aa19.81■□□□□ 0.76
TARDBP-228ENST00000629725 RPS18P62269 152 aaKnown RBP19.81■□□□□ 0.76
TARDBP-228ENST00000629725 DSC2Q02487 901 aa19.81■□□□□ 0.76
TARDBP-228ENST00000629725 CHAF1BQ13112 559 aa19.81■□□□□ 0.76
TARDBP-228ENST00000629725 MRPL49Q13405 166 aaKnown RBP19.81■□□□□ 0.76
TARDBP-228ENST00000629725 SEPT7Q16181 437 aaKnown RBP19.81■□□□□ 0.76
TARDBP-228ENST00000629725 INSCQ1MX18 579 aa19.81■□□□□ 0.76
TARDBP-228ENST00000629725 TDRD12Q587J7 1177 aaKnown RBP19.81■□□□□ 0.76
TARDBP-228ENST00000629725 ANKRD20A8PQ5CZ79 823 aa19.81■□□□□ 0.76
TARDBP-228ENST00000629725 PAPD7Q5XG87 772 aaKnown RBP19.81■□□□□ 0.76
TARDBP-228ENST00000629725 ALG1LQ6GMV1 187 aa19.81■□□□□ 0.76
TARDBP-228ENST00000629725 PWWP2BQ6NUJ5 590 aa19.81■□□□□ 0.76
TARDBP-228ENST00000629725 IRGCQ6NXR0 463 aa19.81■□□□□ 0.76
TARDBP-228ENST00000629725 IRF2BP2Q7Z5L9 587 aa19.81■□□□□ 0.76
TARDBP-228ENST00000629725 SYVN1Q86TM6 617 aa19.81■□□□□ 0.76
TARDBP-228ENST00000629725 LPCAT1Q8NF37 534 aa19.81■□□□□ 0.76
TARDBP-228ENST00000629725 PRR7Q8TB68 274 aa19.81■□□□□ 0.76
TARDBP-228ENST00000629725 CCHCR1Q8TD31 782 aa19.81■□□□□ 0.76
TARDBP-228ENST00000629725 RUFY1Q96T51 708 aa19.81■□□□□ 0.76
TARDBP-228ENST00000629725 SYT11Q9BT88 431 aa19.81■□□□□ 0.76
TARDBP-228ENST00000629725 NUP62CLQ9H1M0 184 aa19.81■□□□□ 0.76
TARDBP-228ENST00000629725 AKIRIN1Q9H9L7 192 aaPredicted RBP19.81■□□□□ 0.76
TARDBP-228ENST00000629725 PCDH9Q9HC56 1237 aa19.81■□□□□ 0.76
TARDBP-228ENST00000629725 ARFGAP3Q9NP61 516 aa19.81■□□□□ 0.76
TARDBP-228ENST00000629725 POT1Q9NUX5 634 aa19.81■□□□□ 0.76
TARDBP-228ENST00000629725 FANCLQ9NW38 375 aa19.81■□□□□ 0.76
TARDBP-228ENST00000629725 RARRES3Q9UL19 164 aa19.81■□□□□ 0.76
TARDBP-228ENST00000629725 TTLL3Q9Y4R7 772 aa19.81■□□□□ 0.76
TARDBP-228ENST00000629725 ABCA12Q86UK0 2595 aa19.81■□□□□ 0.76
TARDBP-228ENST00000629725 RGSL1A5PLK6 1076 aa19.8■□□□□ 0.76
TARDBP-228ENST00000629725 ARGFXA6NJG6 315 aa19.8■□□□□ 0.76
TARDBP-228ENST00000629725 PDZK1P1A8MUH7 402 aa19.8■□□□□ 0.76
TARDBP-228ENST00000629725 LGALS16A8MUM7 142 aa19.8■□□□□ 0.76
TARDBP-228ENST00000629725 GPR89AB7ZAQ6 455 aa19.8■□□□□ 0.76
TARDBP-228ENST00000629725 SLC25A14O95258 325 aaPredicted RBP19.8■□□□□ 0.76
TARDBP-228ENST00000629725 GPR89BP0CG08 455 aa19.8■□□□□ 0.76
TARDBP-228ENST00000629725 TCF4P15884 667 aa19.8■□□□□ 0.76
TARDBP-228ENST00000629725 DCTP40126 519 aa19.8■□□□□ 0.76
TARDBP-228ENST00000629725 RPL26P61254 145 aaKnown RBP19.8■□□□□ 0.76
TARDBP-228ENST00000629725 RPS15P62841 145 aaKnown RBP19.8■□□□□ 0.76
TARDBP-228ENST00000629725 TUBB3Q13509 450 aa19.8■□□□□ 0.76
TARDBP-228ENST00000629725 CHRNA6Q15825 494 aa19.8■□□□□ 0.76
TARDBP-228ENST00000629725 PLA2G4EQ3MJ16 856 aa19.8■□□□□ 0.76
TARDBP-228ENST00000629725 ZNF648Q5T619 568 aaPredicted RBP19.8■□□□□ 0.76
TARDBP-228ENST00000629725 FAM199XQ6PEV8 388 aaPredicted RBP19.8■□□□□ 0.76
TARDBP-228ENST00000629725 ANKRD20A12PQ8NF67 263 aa19.8■□□□□ 0.76
TARDBP-228ENST00000629725 FCRL4Q96PJ5 515 aa19.8■□□□□ 0.76
TARDBP-228ENST00000629725 ERGIC2Q96RQ1 377 aa19.8■□□□□ 0.76
TARDBP-228ENST00000629725 SLC29A3Q9BZD2 475 aa19.8■□□□□ 0.76
TARDBP-228ENST00000629725 TRIM39Q9HCM9 518 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms