RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 CDK14O94921 469 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 MAGEA12P43365 314 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 RGS4P49798 205 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 EIF4EBP2Q13542 120 aaPredicted RBP12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 KCTD11Q693B1 232 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 NXNQ6DKJ4 435 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 STYXQ8WUJ0 223 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 ATP6V1E2Q96A05 226 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 SH3KBP1Q96B97 665 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 NSL1Q96IY1 281 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 SHROOM3Q8TF72 1996 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 NYNRINQ9P2P1 1898 aaKnown RBP12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 MYL2P10916 166 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 ADRB3P13945 408 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 CD68P34810 354 aaPredicted RBP12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 HNF1BP35680 557 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 PLK1P53350 603 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 PTPRCAPQ14761 206 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 KRT72Q14CN4 511 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 ANKRD20A4Q4UJ75 823 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 THEMIS2Q5TEJ8 643 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 ALYREFQ86V81 257 aaKnown RBP12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 TREML1Q86YW5 311 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 ISL2Q96A47 359 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 NUS1Q96E22 293 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 MRGPRX2Q96LB1 330 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 FCRL3Q96P31 734 aaPredicted RBP12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 RIOK2Q9BVS4 552 aaKnown RBP12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 FBRSQ9HAH7 460 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 LHX3Q9UBR4 397 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 TCAF1Q9Y4C2 921 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 KCTD3Q9Y597 815 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 MYO16Q9Y6X6 1858 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 COL4A6Q14031 1691 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 A0A0U1RQS6 177 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 SEMA4FO95754 770 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 BPGMP07738 259 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 TPBGLP0DKB5 382 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 GNSP15586 552 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 UGT1A6P19224 532 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 UGT1A1P22309 533 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 UGT1A4P22310 534 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 UGT1A3P35503 534 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 UGT1A5P35504 534 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 CD151P48509 253 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 TTLL9Q3SXZ7 439 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 FSTL4Q6MZW2 842 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 RINLQ6ZS11 566 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 LONP2Q86WA8 852 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 TRIM54Q9BYV2 358 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 THAP1Q9NVV9 213 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 ANKRD6Q9Y2G4 727 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 ZNF217O75362 1048 aa12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 RPP40O75818 363 aaKnown RBP12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 OR56A5P0C7T3 313 aa12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 KELP23276 732 aa12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 MAP4P27816 1152 aaKnown RBP12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 NMBRP28336 390 aa12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 TAF1AQ15573 450 aaPredicted RBP12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 CRY1Q16526 586 aa12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 KLHDC8BQ8IXV7 354 aa12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 FBXO27Q8NI29 283 aa12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 PIGKQ92643 395 aa12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 NMUR2Q9GZQ4 415 aa12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 MMP17Q9ULZ9 603 aa12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 LTBP2Q14767 1821 aa12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 IGLON5A6NGN9 336 aa12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 ANHXE9PGG2 379 aa12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 GFRA2O00451 464 aa12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 CD3EAPO15446 510 aaKnown RBP12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 RNGTTO60942 597 aaKnown RBP12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 PDE1CQ14123 709 aaPredicted RBP12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 TSTD2Q5T7W7 516 aa12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 IL17RCQ8NAC3 791 aa12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 SCAMP4Q969E2 229 aa12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 RAB7BQ96AH8 199 aa12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 TOE1Q96GM8 510 aaKnown RBP12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 TACO1Q9BSH4 297 aaKnown RBP12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 RIF1Q5UIP0 2472 aaKnown RBP12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 PLXNA4Q9HCM2 1894 aa12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 A0A0J9YYE9 177 aa12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 EPOP01588 193 aa12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 TRBC1P01850 177 aa12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 FGF3P11487 239 aaPredicted RBP12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 CPA3P15088 417 aa12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 GMPRP36959 345 aa12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 RPL26P61254 145 aaKnown RBP12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 CRYMQ14894 314 aa12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 PTPRNQ16849 979 aa12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 MAVSQ7Z434 540 aa12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 PHACTR4Q8IZ21 702 aa12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 TMEM159Q96B96 161 aa12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 ZNF419Q96HQ0 510 aaPredicted RBP12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 RNPEPL1Q9HAU8 725 aa12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 FZD3Q9NPG1 666 aa12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 IRAK4Q9NWZ3 460 aa12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 NOP53Q9NZM5 478 aaKnown RBP12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 RPL26L1Q9UNX3 145 aaKnown RBP12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 EP300Q09472 2414 aaPredicted RBP12.36□□□□□ -0.43
SYNGAP1-207ENST00000628646 RECQL5O94762 991 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms