RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 ACSBG2Q5FVE4 666 aa21.85■■□□□ 1.09
PNKP-220ENST00000627232 TMEM198Q66K66 360 aa21.85■■□□□ 1.09
PNKP-220ENST00000627232 PGM2L1Q6PCE3 622 aa21.85■■□□□ 1.09
PNKP-220ENST00000627232 SNX32Q86XE0 403 aa21.85■■□□□ 1.09
PNKP-220ENST00000627232 GPSM1Q86YR5 675 aa21.85■■□□□ 1.09
PNKP-220ENST00000627232 CPNE9Q8IYJ1 553 aa21.85■■□□□ 1.09
PNKP-220ENST00000627232 ZDHHC6Q9H6R6 413 aa21.85■■□□□ 1.09
PNKP-220ENST00000627232 NKX1-2Q9UD57 310 aaPredicted RBP21.85■■□□□ 1.09
PNKP-220ENST00000627232 SLC7A8Q9UHI5 535 aa21.85■■□□□ 1.09
PNKP-220ENST00000627232 SLCO3A1Q9UIG8 710 aa21.85■■□□□ 1.09
PNKP-220ENST00000627232 CRLS1Q9UJA2 301 aa21.85■■□□□ 1.09
PNKP-220ENST00000627232 ERVW-1Q9UQF0 538 aa21.85■■□□□ 1.09
PNKP-220ENST00000627232 COPG1Q9Y678 874 aaKnown RBP21.85■■□□□ 1.09
PNKP-220ENST00000627232 BPTFQ12830 3046 aa21.85■■□□□ 1.09
PNKP-220ENST00000627232 GPR39O43194 453 aa21.85■■□□□ 1.09
PNKP-220ENST00000627232 CCNT2O60583 730 aaKnown RBP21.85■■□□□ 1.09
PNKP-220ENST00000627232 POLR2EP19388 210 aaKnown RBP21.85■■□□□ 1.09
PNKP-220ENST00000627232 CDH13P55290 713 aa21.85■■□□□ 1.09
PNKP-220ENST00000627232 SH3BP2P78314 561 aa21.85■■□□□ 1.09
PNKP-220ENST00000627232 CLCQ05315 142 aa21.85■■□□□ 1.09
PNKP-220ENST00000627232 LCP2Q13094 533 aa21.85■■□□□ 1.09
PNKP-220ENST00000627232 SWT1Q5T5J6 900 aaKnown RBP21.85■■□□□ 1.09
PNKP-220ENST00000627232 KANK2Q63ZY3 851 aa21.85■■□□□ 1.09
PNKP-220ENST00000627232 SPRED2Q7Z698 418 aa21.85■■□□□ 1.09
PNKP-220ENST00000627232 TSPAN33Q86UF1 283 aa21.85■■□□□ 1.09
PNKP-220ENST00000627232 HTATIP2Q9BUP3 242 aa21.85■■□□□ 1.09
PNKP-220ENST00000627232 MID1IP1Q9NPA3 183 aa21.85■■□□□ 1.09
PNKP-220ENST00000627232 NUDT4Q9NZJ9 180 aa21.85■■□□□ 1.09
PNKP-220ENST00000627232 FBXO10Q9UK96 956 aa21.85■■□□□ 1.09
PNKP-220ENST00000627232 G3BP2Q9UN86 482 aaKnown RBP21.85■■□□□ 1.09
PNKP-220ENST00000627232 MRPS23Q9Y3D9 190 aaKnown RBP21.85■■□□□ 1.09
PNKP-220ENST00000627232 WNT6Q9Y6F9 365 aa21.85■■□□□ 1.09
PNKP-220ENST00000627232 PLXNB3Q9ULL4 1909 aa21.85■■□□□ 1.09
PNKP-220ENST00000627232 AZIN1O14977 448 aa21.84■■□□□ 1.09
PNKP-220ENST00000627232 PSMG1O95456 288 aa21.84■■□□□ 1.09
PNKP-220ENST00000627232 HSPA1AP0DMV8 641 aaKnown RBP21.84■■□□□ 1.09
PNKP-220ENST00000627232 HSPA1BP0DMV9 641 aaKnown RBP21.84■■□□□ 1.09
PNKP-220ENST00000627232 SYN1P17600 705 aa21.84■■□□□ 1.09
PNKP-220ENST00000627232 ATP4BP51164 291 aa21.84■■□□□ 1.09
PNKP-220ENST00000627232 CCNG1P51959 295 aa21.84■■□□□ 1.09
PNKP-220ENST00000627232 POLR2LP62875 67 aaKnown RBP21.84■■□□□ 1.09
PNKP-220ENST00000627232 CDC16Q13042 620 aa21.84■■□□□ 1.09
PNKP-220ENST00000627232 SQLEQ14534 574 aa21.84■■□□□ 1.09
PNKP-220ENST00000627232 LRRC66Q68CR7 880 aa21.84■■□□□ 1.09
PNKP-220ENST00000627232 GDPD4Q6W3E5 623 aa21.84■■□□□ 1.09
PNKP-220ENST00000627232 MACC1Q6ZN28 852 aa21.84■■□□□ 1.09
PNKP-220ENST00000627232 NXPE1Q8N323 547 aa21.84■■□□□ 1.09
PNKP-220ENST00000627232 CELF5Q8N6W0 485 aaKnown RBP21.84■■□□□ 1.09
PNKP-220ENST00000627232 ZNF483Q8TF39 744 aaPredicted RBP21.84■■□□□ 1.09
PNKP-220ENST00000627232 STMN2Q93045 179 aa21.84■■□□□ 1.09
PNKP-220ENST00000627232 ASIC4Q96FT7 647 aa21.84■■□□□ 1.09
PNKP-220ENST00000627232 CLPTM1LQ96KA5 538 aa21.84■■□□□ 1.09
PNKP-220ENST00000627232 SARS2Q9NP81 518 aaKnown RBP21.84■■□□□ 1.09
PNKP-220ENST00000627232 NDE1Q9NXR1 346 aa21.84■■□□□ 1.09
PNKP-220ENST00000627232 LRRC14BA6NHZ5 514 aa21.83■■□□□ 1.09
PNKP-220ENST00000627232 UBDO15205 165 aa21.83■■□□□ 1.09
PNKP-220ENST00000627232 BNIP3LO60238 219 aa21.83■■□□□ 1.09
PNKP-220ENST00000627232 UGT2B4P06133 528 aa21.83■■□□□ 1.09
PNKP-220ENST00000627232 CHRM1P11229 460 aaPredicted RBP21.83■■□□□ 1.09
PNKP-220ENST00000627232 BMP1P13497 986 aa21.83■■□□□ 1.09
PNKP-220ENST00000627232 TSPAN8P19075 237 aa21.83■■□□□ 1.09
PNKP-220ENST00000627232 GNAZP19086 355 aa21.83■■□□□ 1.09
PNKP-220ENST00000627232 RECQLP46063 649 aaPredicted RBP21.83■■□□□ 1.09
PNKP-220ENST00000627232 ACTR3P61158 418 aa21.83■■□□□ 1.09
PNKP-220ENST00000627232 CRY1Q16526 586 aa21.83■■□□□ 1.09
PNKP-220ENST00000627232 ZNF697Q5TEC3 545 aa21.83■■□□□ 1.09
PNKP-220ENST00000627232 CLEC6AQ6EIG7 209 aa21.83■■□□□ 1.09
PNKP-220ENST00000627232 C16orf89Q6UX73 402 aa21.83■■□□□ 1.09
PNKP-220ENST00000627232 Q6ZVU0 165 aa21.83■■□□□ 1.09
PNKP-220ENST00000627232 LARP4Q71RC2 724 aaKnown RBP eCLIP21.83■■□□□ 1.09
PNKP-220ENST00000627232 ADAMTSL2Q86TH1 951 aa21.83■■□□□ 1.09
PNKP-220ENST00000627232 DEFB107AQ8IZN7 70 aa21.83■■□□□ 1.09
PNKP-220ENST00000627232 GPR26Q8NDV2 337 aa21.83■■□□□ 1.09
PNKP-220ENST00000627232 OR2A12Q8NGT7 310 aa21.83■■□□□ 1.09
PNKP-220ENST00000627232 PLEKHG4BQ96PX9 1271 aa21.83■■□□□ 1.09
PNKP-220ENST00000627232 CIPCQ9C0C6 399 aa21.83■■□□□ 1.09
PNKP-220ENST00000627232 LATS2Q9NRM7 1088 aa21.83■■□□□ 1.09
PNKP-220ENST00000627232 HCFC2Q9Y5Z7 792 aa21.83■■□□□ 1.09
PNKP-220ENST00000627232 IQCF5A8MTL0 148 aa21.82■■□□□ 1.08
PNKP-220ENST00000627232 SNX2O60749 519 aa21.82■■□□□ 1.08
PNKP-220ENST00000627232 GPC4O75487 556 aa21.82■■□□□ 1.08
PNKP-220ENST00000627232 PAPLNO95428 1278 aa21.82■■□□□ 1.08
PNKP-220ENST00000627232 ANP32DO95626 131 aa21.82■■□□□ 1.08
PNKP-220ENST00000627232 MYOGP15173 224 aa21.82■■□□□ 1.08
PNKP-220ENST00000627232 CA5AP35218 305 aa21.82■■□□□ 1.08
PNKP-220ENST00000627232 RGS4P49798 205 aa21.82■■□□□ 1.08
PNKP-220ENST00000627232 PTSQ03393 145 aa21.82■■□□□ 1.08
PNKP-220ENST00000627232 MAPRE2Q15555 327 aa21.82■■□□□ 1.08
PNKP-220ENST00000627232 ICE2Q659A1 982 aa21.82■■□□□ 1.08
PNKP-220ENST00000627232 BRAT1Q6PJG6 821 aa21.82■■□□□ 1.08
PNKP-220ENST00000627232 CYHR1Q6ZMK1 362 aa21.82■■□□□ 1.08
PNKP-220ENST00000627232 RIPOR1Q6ZS17 1223 aa21.82■■□□□ 1.08
PNKP-220ENST00000627232 TRPC4APQ8TEL6 797 aa21.82■■□□□ 1.08
PNKP-220ENST00000627232 ING5Q8WYH8 240 aa21.82■■□□□ 1.08
PNKP-220ENST00000627232 ULK4Q96C45 1275 aa21.82■■□□□ 1.08
PNKP-220ENST00000627232 C19orf60Q96EN9 201 aa21.82■■□□□ 1.08
PNKP-220ENST00000627232 NSUN5Q96P11 429 aaKnown RBP21.82■■□□□ 1.08
PNKP-220ENST00000627232 PANX3Q96QZ0 392 aa21.82■■□□□ 1.08
PNKP-220ENST00000627232 LBHD1Q9BQE6 289 aaPredicted RBP21.82■■□□□ 1.08
PNKP-220ENST00000627232 HEPHQ9BQS7 1158 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms