RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 HDAC2Q92769 488 aaKnown RBP8.85□□□□□ -0.99
VCL-206ENST00000623461 C18orf25Q96B23 403 aaPredicted RBP8.85□□□□□ -0.99
VCL-206ENST00000623461 FAM163AQ96GL9 167 aaPredicted RBP8.85□□□□□ -0.99
VCL-206ENST00000623461 ASB3Q9Y575 518 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 RIMBP3CA6NJZ7 1639 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 RIMBP3BA6NNM3 1639 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 RIMBP3Q9UFD9 1639 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 LRCH4O75427 683 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 SLC2A2P11168 524 aaPredicted RBP8.85□□□□□ -0.99
VCL-206ENST00000623461 RELAQ04206 551 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 RFTN1Q14699 578 aaPredicted RBP8.85□□□□□ -0.99
VCL-206ENST00000623461 INTS6LQ5JSJ4 861 aaKnown RBP8.85□□□□□ -0.99
VCL-206ENST00000623461 MTSS1LQ765P7 747 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 TMEM86AQ8N2M4 240 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 OR4L1Q8NH43 312 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 SLC30A2Q9BRI3 323 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 ZNF717Q9BY31 904 aaPredicted RBP8.85□□□□□ -0.99
VCL-206ENST00000623461 GBA3Q9H227 469 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 OXSMQ9NWU1 459 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 AURKAO14965 403 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 LYPLA2O95372 231 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 THP07101 528 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 OGFRL1Q5TC84 451 aaPredicted RBP8.85□□□□□ -0.99
VCL-206ENST00000623461 MIB1Q86YT6 1006 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 NIPA2Q8N8Q9 360 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 ZNF431Q8TF32 576 aaPredicted RBP8.85□□□□□ -0.99
VCL-206ENST00000623461 UFD1Q92890 307 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 UBR1Q8IWV7 1749 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 K7EPI3 171 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 VEGFAP15692 232 aaPredicted RBP8.85□□□□□ -0.99
VCL-206ENST00000623461 NFE2Q16621 373 aaPredicted RBP8.85□□□□□ -0.99
VCL-206ENST00000623461 CYP2A13Q16696 494 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 TMEM44Q2T9K0 475 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 AP5B1Q2VPB7 878 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 CERCAMQ5T4B2 595 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 FAM20CQ8IXL6 584 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 GPR65Q8IYL9 337 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 PHOX2BQ99453 314 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 SLC6A15Q9H2J7 730 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 LRTM1Q9HBL6 345 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 NCKAP1Q9Y2A7 1128 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 FFAR3O14843 346 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 MID1O15344 667 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 GPR42O15529 346 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 MYCP01106 439 aaPredicted RBP8.85□□□□□ -0.99
VCL-206ENST00000623461 GRIA2P42262 883 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 DCDC1P59894 354 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 KLHL22Q53GT1 634 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 PHC2Q8IXK0 858 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 BCL7BQ9BQE9 202 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 FDXACB1Q9BRP7 624 aaPredicted RBP8.85□□□□□ -0.99
VCL-206ENST00000623461 ELOVL4Q9GZR5 314 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 NKIRAS2Q9NYR9 191 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 ADAMTS13Q76LX8 1427 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 LOC100130705A0A1B0GUX0 176 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.84□□□□□ -0.99
VCL-206ENST00000623461 CBX4O00257 560 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 ARPC2O15144 300 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 PDPK1O15530 556 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 DYRK3O43781 588 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 PRMT3O60678 531 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 FGF1P05230 155 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 NCK1P16333 377 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 TCEAL1Q15170 157 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 HSD17B12Q53GQ0 312 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 ZNF614Q8N883 585 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 OR4A15Q8NGL6 344 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 AKAP1Q92667 903 aaKnown RBP eCLIP8.84□□□□□ -0.995e-7■■□□□ 14.2
VCL-206ENST00000623461 RFKQ969G6 155 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 FAM84AQ96KN4 292 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 ST6GALNAC4Q9H4F1 302 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 ZBTB26Q9HCK0 441 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 VPS28Q9UK41 221 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 TECPR2O15040 1411 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 CNTNAP4Q9C0A0 1308 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 TYROBPO43914 113 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 RLN1P04808 185 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 CES1P23141 567 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 PTPN3P26045 913 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 CYP4F8P98187 520 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 CLCQ05315 142 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 PTPRNQ16849 979 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 TEX44Q53QW1 395 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 SLC25A24Q6NUK1 477 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 BRINP3Q76B58 766 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 TFAP2DQ7Z6R9 452 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 IRGQQ8WZA9 623 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 GATA6Q92908 595 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 KCTD15Q96SI1 283 aaPredicted RBP8.84□□□□□ -0.99
VCL-206ENST00000623461 ULBP1Q9BZM6 244 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 ENTPD4Q9Y227 616 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 IL7P13232 177 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 PROZP22891 400 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 FMO3P31513 532 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 GUCA1AP43080 201 aaPredicted RBP8.84□□□□□ -0.99
VCL-206ENST00000623461 MYBPC1Q00872 1141 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 SLC27A1Q6PCB7 646 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 CARNMT1Q8N4J0 409 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 NKX2-3Q8TAU0 364 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 CREB3L1Q96BA8 519 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms