RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 BRWD3Q6RI45 1802 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 PSMD3O43242 534 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 CLPXO76031 633 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 MYO1DO94832 1006 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 SERPINB1P30740 379 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 CD52P31358 61 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 PLA2G16P53816 162 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 MTPNP58546 118 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 C9orf57Q5W0N0 161 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 OVOS1Q6IE37 1185 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 RRM2BQ7LG56 351 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 HS6ST3Q8IZP7 471 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 SFRP1Q8N474 314 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 ABHD11Q8NFV4 315 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 KLHL5Q96PQ7 755 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 NPY6RQ99463 290 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 BBS2Q9BXC9 721 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 VRTNQ9H8Y1 702 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 IGSF5Q9NSI5 407 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 SRRDQ9UH36 339 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 ANAPC2Q9UJX6 822 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 ERGIC3Q9Y282 383 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 TBKBP1A7MCY6 615 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 ZNF197O14709 1029 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 SLC22A2O15244 555 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 ACOX3O15254 700 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 XPNPEP2O43895 674 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 NPHS1O60500 1241 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 CLASP2O75122 1294 aaKnown RBP6.91□□□□□ -1.3
NEDD9-216ENST00000620854 WDR47O94967 919 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 INMTO95050 263 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 SLC10A3P09131 477 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 TCF3P15923 654 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 ITGB6P18564 788 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 S100A5P33763 92 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 SCNN1GP51170 649 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 PRKAA2P54646 552 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 SLC13A2Q13183 592 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 SNX17Q15036 470 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 PAFAH1B3Q15102 231 aaKnown RBP6.91□□□□□ -1.3
NEDD9-216ENST00000620854 NFE2Q16621 373 aaPredicted RBP6.91□□□□□ -1.3
NEDD9-216ENST00000620854 ZNF792Q3KQV3 632 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 CTXN3Q4LDR2 81 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 MRNIPQ6NTE8 343 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 DHRS4L2Q6PKH6 230 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 LARP4Q71RC2 724 aaKnown RBP eCLIP6.91□□□□□ -1.3
NEDD9-216ENST00000620854 SLCO6A1Q86UG4 719 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 ALDH16A1Q8IZ83 802 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 CADM3Q8N126 398 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 TWIST2Q8WVJ9 160 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 FIG4Q92562 907 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 ZFP42Q96MM3 310 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 SEZ6LQ9BYH1 1024 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 MEAF6Q9HAF1 191 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 SIAEQ9HAT2 523 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 RIC8BQ9NVN3 520 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 PSME2Q9UL46 239 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 VWA7Q9Y334 891 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 FAM32AQ9Y421 112 aaKnown RBP6.91□□□□□ -1.3
NEDD9-216ENST00000620854 QSER1Q2KHR3 1735 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 KATNA1O75449 491 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 CAPNS1P04632 268 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 INHAP05111 366 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 FYNP06241 537 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 NPR3P17342 541 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 GPX3P22352 226 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 DCKP27707 260 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 PRDX3P30048 256 aaKnown RBP6.91□□□□□ -1.3
NEDD9-216ENST00000620854 CDKN2DP55273 166 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 CCL23P55773 120 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 UFM1P61960 85 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 SOX4Q06945 474 aaPredicted RBP6.91□□□□□ -1.3
NEDD9-216ENST00000620854 NR6A1Q15406 480 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 ATP6AP1LQ52LC2 224 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 TECRLQ5HYJ1 363 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 TJAP1Q5JTD0 557 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 TMEM236Q5W0B7 351 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 TMEM207Q6UWW9 146 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 OSTM1Q86WC4 334 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 ZFP90Q8TF47 636 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 RSPH1Q8WYR4 309 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 HNRNPABQ99729 332 aaKnown RBP6.91□□□□□ -1.3
NEDD9-216ENST00000620854 KIFC1Q9BW19 673 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 FUNDC2Q9BWH2 189 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 NOL6Q9H6R4 1146 aaKnown RBP6.91□□□□□ -1.3
NEDD9-216ENST00000620854 ARMC1Q9NVT9 282 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 TRMT6Q9UJA5 497 aaKnown RBP6.91□□□□□ -1.3
NEDD9-216ENST00000620854 MCM3APO60318 1980 aa6.9□□□□□ -1.3
NEDD9-216ENST00000620854 EVPLLA8MZ36 301 aa6.9□□□□□ -1.3
NEDD9-216ENST00000620854 H0YJX3 145 aa6.9□□□□□ -1.3
NEDD9-216ENST00000620854 ENPP3O14638 875 aa6.9□□□□□ -1.3
NEDD9-216ENST00000620854 MSI1O43347 362 aaKnown RBP6.9□□□□□ -1.3
NEDD9-216ENST00000620854 SOAT2O75908 522 aa6.9□□□□□ -1.3
NEDD9-216ENST00000620854 CDK14O94921 469 aa6.9□□□□□ -1.3
NEDD9-216ENST00000620854 ZNF682O95780 498 aa6.9□□□□□ -1.3
NEDD9-216ENST00000620854 DLGAP3O95886 979 aa6.9□□□□□ -1.3
NEDD9-216ENST00000620854 PRSS56P0CW18 603 aa6.9□□□□□ -1.3
NEDD9-216ENST00000620854 CYP4B1P13584 511 aa6.9□□□□□ -1.3
NEDD9-216ENST00000620854 POU1F1P28069 291 aa6.9□□□□□ -1.3
NEDD9-216ENST00000620854 TGFBR1P36897 503 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms