RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 VPS35Q96QK1 796 aa13.5□□□□□ -0.25
NEK3-210ENST00000620675 C19orf43Q9BQ61 176 aa13.5□□□□□ -0.25
NEK3-210ENST00000620675 SMYD2Q9NRG4 433 aa13.5□□□□□ -0.25
NEK3-210ENST00000620675 PHPT1Q9NRX4 125 aaPredicted RBP13.5□□□□□ -0.25
NEK3-210ENST00000620675 C20orf96Q9NUD7 363 aaPredicted RBP13.5□□□□□ -0.25
NEK3-210ENST00000620675 NCDNQ9UBB6 729 aa13.5□□□□□ -0.25
NEK3-210ENST00000620675 CRLS1Q9UJA2 301 aa13.5□□□□□ -0.25
NEK3-210ENST00000620675 PLEKHM1Q9Y4G2 1056 aa13.5□□□□□ -0.25
NEK3-210ENST00000620675 PRSS21Q9Y6M0 314 aa13.5□□□□□ -0.25
NEK3-210ENST00000620675 RP1P56715 2156 aa13.5□□□□□ -0.25
NEK3-210ENST00000620675 CACNB4O00305 520 aaPredicted RBP13.49□□□□□ -0.25
NEK3-210ENST00000620675 NDC80O14777 642 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 CD3EAPO15446 510 aaKnown RBP13.49□□□□□ -0.25
NEK3-210ENST00000620675 ASMTLO95671 621 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 ZNF8P17098 575 aaPredicted RBP13.49□□□□□ -0.25
NEK3-210ENST00000620675 ITGALP20701 1170 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 HOXD12P35452 270 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 CTSCP53634 463 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 C21orf59P57076 290 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 KIAA1024LP59773 190 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 YPEL5P62699 121 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 CTBP1Q13363 440 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 LAMB3Q13751 1172 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 ITGA9Q13797 1035 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 SHBQ15464 509 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 CCNI2Q6ZMN8 369 aaPredicted RBP13.49□□□□□ -0.25
NEK3-210ENST00000620675 MACC1Q6ZN28 852 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 CLDN19Q8N6F1 224 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 DDHD1Q8NEL9 900 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 DTX3LQ8TDB6 740 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 WDR92Q96MX6 357 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 SEMA4GQ9NTN9 838 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 CATSPERZQ9NTU4 200 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 SMOXQ9NWM0 555 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 NINJ2Q9NZG7 142 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 MOSPD1Q9UJG1 213 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 GMEB2Q9UKD1 530 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 SLC6A14Q9UN76 642 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 EIF3HO15372 352 aaKnown RBP eCLIP13.49□□□□□ -0.25
NEK3-210ENST00000620675 SGTAO43765 313 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 SDC3O75056 442 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 C1QAP02745 245 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 ENGP17813 658 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 ACRV1P26436 265 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 ABCG1P45844 678 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 LONRF1Q17RB8 773 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 SPANXN3Q5MJ09 141 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 PDPK2PQ6A1A2 396 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 KCNMB4Q86W47 210 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 PHYKPLQ8IUZ5 450 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 HID1Q8IV36 788 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 PIAS4Q8N2W9 510 aaPredicted RBP13.49□□□□□ -0.25
NEK3-210ENST00000620675 BEND7Q8N7W2 519 aaPredicted RBP13.49□□□□□ -0.25
NEK3-210ENST00000620675 RASGEF1AQ8N9B8 481 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 OR56A4Q8NGH8 313 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 CCL4L1Q8NHW4 92 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 SGF29Q96ES7 293 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 GTPBP2Q9BX10 602 aaKnown RBP13.49□□□□□ -0.25
NEK3-210ENST00000620675 PARD6BQ9BYG5 372 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 CDC42EP4Q9H3Q1 356 aaKnown RBP13.49□□□□□ -0.25
NEK3-210ENST00000620675 CYP4F12Q9HCS2 524 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 IARS2Q9NSE4 1012 aaKnown RBP13.49□□□□□ -0.25
NEK3-210ENST00000620675 DNAJC28Q9NX36 388 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 MTRF1LQ9UGC7 380 aaKnown RBP13.49□□□□□ -0.25
NEK3-210ENST00000620675 SUFUQ9UMX1 484 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 SLC17A4Q9Y2C5 497 aa13.49□□□□□ -0.25
NEK3-210ENST00000620675 SPTBN2O15020 2390 aa13.48□□□□□ -0.25
NEK3-210ENST00000620675 PRSS38A1L453 326 aa13.48□□□□□ -0.25
NEK3-210ENST00000620675 OR2AG2A6NM03 316 aa13.48□□□□□ -0.25
NEK3-210ENST00000620675 CXorf49A8MYA2 514 aaPredicted RBP13.48□□□□□ -0.25
NEK3-210ENST00000620675 PRR5-ARHGAP8B1AHC4 643 aa13.48□□□□□ -0.25
NEK3-210ENST00000620675 ARHGAP33O14559 1287 aa13.48□□□□□ -0.25
NEK3-210ENST00000620675 GDF9O60383 454 aa13.48□□□□□ -0.25
NEK3-210ENST00000620675 DNAJC6O75061 913 aa13.48□□□□□ -0.25
NEK3-210ENST00000620675 HOXC4P09017 264 aaPredicted RBP13.48□□□□□ -0.25
NEK3-210ENST00000620675 ZNF806P0C7X5 589 aa13.48□□□□□ -0.25
NEK3-210ENST00000620675 SLC1A2P43004 574 aa13.48□□□□□ -0.25
NEK3-210ENST00000620675 MPP1Q00013 466 aa13.48□□□□□ -0.25
NEK3-210ENST00000620675 TMEM115Q12893 351 aaPredicted RBP13.48□□□□□ -0.25
NEK3-210ENST00000620675 BNIP3Q12983 259 aa13.48□□□□□ -0.25
NEK3-210ENST00000620675 TEAD4Q15561 434 aa13.48□□□□□ -0.25
NEK3-210ENST00000620675 HLA-BQ31612 363 aa13.48□□□□□ -0.25
NEK3-210ENST00000620675 FASTKD1Q53R41 847 aaKnown RBP13.48□□□□□ -0.25
NEK3-210ENST00000620675 ZNF470Q6ECI4 717 aa13.48□□□□□ -0.25
NEK3-210ENST00000620675 NEPROQ6NW34 567 aa13.48□□□□□ -0.25
NEK3-210ENST00000620675 ZNF547Q8IVP9 402 aa13.48□□□□□ -0.25
NEK3-210ENST00000620675 OTUD6BQ8N6M0 293 aa13.48□□□□□ -0.25
NEK3-210ENST00000620675 CEP76Q8TAP6 659 aa13.48□□□□□ -0.25
NEK3-210ENST00000620675 CERS2Q96G23 380 aa13.48□□□□□ -0.25
NEK3-210ENST00000620675 TRIM39Q9HCM9 518 aa13.48□□□□□ -0.25
NEK3-210ENST00000620675 PSAT1Q9Y617 370 aa13.48□□□□□ -0.25
NEK3-210ENST00000620675 TCRBV9S1A1TA0A576 114 aa13.48□□□□□ -0.25
NEK3-210ENST00000620675 KHNYNO15037 678 aaKnown RBP13.48□□□□□ -0.25
NEK3-210ENST00000620675 GABRB3P28472 473 aa13.48□□□□□ -0.25
NEK3-210ENST00000620675 TNFRSF8P28908 595 aa13.48□□□□□ -0.25
NEK3-210ENST00000620675 AKT1P31749 480 aa13.48□□□□□ -0.25
NEK3-210ENST00000620675 GNPDA1P46926 289 aa13.48□□□□□ -0.25
NEK3-210ENST00000620675 SRP54P61011 504 aaKnown RBP13.48□□□□□ -0.25
NEK3-210ENST00000620675 OVGP1Q12889 678 aa13.48□□□□□ -0.25
NEK3-210ENST00000620675 C1orf61Q13536 156 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms