RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 ATXN10Q9UBB4 475 aa15.82■□□□□ 0.12
BRCA1-228ENST00000618469 ARL5AQ9Y689 179 aa15.82■□□□□ 0.12
BRCA1-228ENST00000618469 RNF215Q9Y6U7 377 aa15.82■□□□□ 0.12
BRCA1-228ENST00000618469 GLYATL1P3A0A0U1RQE8 302 aa15.81■□□□□ 0.12
BRCA1-228ENST00000618469 STX7O15400 261 aaKnown RBP15.81■□□□□ 0.12
BRCA1-228ENST00000618469 GPR39O43194 453 aa15.81■□□□□ 0.12
BRCA1-228ENST00000618469 METTL18O95568 372 aa15.81■□□□□ 0.12
BRCA1-228ENST00000618469 RPLP0P05388 317 aaKnown RBP15.81■□□□□ 0.12
BRCA1-228ENST00000618469 GLB1P16278 677 aa15.81■□□□□ 0.12
BRCA1-228ENST00000618469 ZNF8P17098 575 aaPredicted RBP15.81■□□□□ 0.12
BRCA1-228ENST00000618469 PEX6Q13608 980 aa15.81■□□□□ 0.12
BRCA1-228ENST00000618469 OASLQ15646 514 aaKnown RBP15.81■□□□□ 0.12
BRCA1-228ENST00000618469 PARP6Q2NL67 630 aa15.81■□□□□ 0.12
BRCA1-228ENST00000618469 PLA2G4EQ3MJ16 856 aa15.81■□□□□ 0.12
BRCA1-228ENST00000618469 ATP13A5Q4VNC0 1218 aa15.81■□□□□ 0.12
BRCA1-228ENST00000618469 ZDHHC20Q5W0Z9 365 aa15.81■□□□□ 0.12
BRCA1-228ENST00000618469 OGFOD3Q6PK18 319 aa15.81■□□□□ 0.12
BRCA1-228ENST00000618469 RANBP10Q6VN20 620 aa15.81■□□□□ 0.12
BRCA1-228ENST00000618469 RBM44Q6ZP01 1051 aaKnown RBP15.81■□□□□ 0.12
BRCA1-228ENST00000618469 MYO18BQ8IUG5 2567 aa15.81■□□□□ 0.12
BRCA1-228ENST00000618469 CACTIN-AS1Q8N1I8 211 aa15.81■□□□□ 0.12
BRCA1-228ENST00000618469 LSM14AQ8ND56 463 aaKnown RBP15.81■□□□□ 0.12
BRCA1-228ENST00000618469 WDR48Q8TAF3 677 aa15.81■□□□□ 0.12
BRCA1-228ENST00000618469 GDAP1Q8TB36 358 aa15.81■□□□□ 0.12
BRCA1-228ENST00000618469 PATE1Q8WXA2 126 aa15.81■□□□□ 0.12
BRCA1-228ENST00000618469 VPS35Q96QK1 796 aa15.81■□□□□ 0.12
BRCA1-228ENST00000618469 TLR10Q9BXR5 811 aa15.81■□□□□ 0.12
BRCA1-228ENST00000618469 FRMD8P1Q9BZ68 369 aaPredicted RBP15.81■□□□□ 0.12
BRCA1-228ENST00000618469 RMI1Q9H9A7 625 aa15.81■□□□□ 0.12
BRCA1-228ENST00000618469 KCNK6Q9Y257 313 aa15.81■□□□□ 0.12
BRCA1-228ENST00000618469 GRID2O43424 1007 aa15.8■□□□□ 0.12
BRCA1-228ENST00000618469 NUAK1O60285 661 aa15.8■□□□□ 0.12
BRCA1-228ENST00000618469 TCEA3O75764 348 aa15.8■□□□□ 0.12
BRCA1-228ENST00000618469 ECEL1O95672 775 aa15.8■□□□□ 0.12
BRCA1-228ENST00000618469 IFNB1P01574 187 aa15.8■□□□□ 0.12
BRCA1-228ENST00000618469 BIRC2Q13490 618 aa15.8■□□□□ 0.12
BRCA1-228ENST00000618469 SNX1Q13596 522 aa15.8■□□□□ 0.12
BRCA1-228ENST00000618469 PTPRCAPQ14761 206 aa15.8■□□□□ 0.12
BRCA1-228ENST00000618469 TAF1AQ15573 450 aaPredicted RBP15.8■□□□□ 0.12
BRCA1-228ENST00000618469 ADGRG6Q86SQ4 1221 aa15.8■□□□□ 0.12
BRCA1-228ENST00000618469 CCNJLQ8IV13 435 aa15.8■□□□□ 0.12
BRCA1-228ENST00000618469 KLHDC8BQ8IXV7 354 aa15.8■□□□□ 0.12
BRCA1-228ENST00000618469 NAGSQ8N159 534 aa15.8■□□□□ 0.12
BRCA1-228ENST00000618469 Q8N9G6 341 aaPredicted RBP15.8■□□□□ 0.12
BRCA1-228ENST00000618469 RTP4Q96DX8 246 aa15.8■□□□□ 0.12
BRCA1-228ENST00000618469 LRRC40Q9H9A6 602 aa15.8■□□□□ 0.12
BRCA1-228ENST00000618469 TRIM39Q9HCM9 518 aa15.8■□□□□ 0.12
BRCA1-228ENST00000618469 IL26Q9NPH9 171 aa15.8■□□□□ 0.12
BRCA1-228ENST00000618469 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.8■□□□□ 0.12
BRCA1-228ENST00000618469 LRIT1Q9P2V4 623 aa15.8■□□□□ 0.12
BRCA1-228ENST00000618469 ZNF148Q9UQR1 794 aa15.8■□□□□ 0.12
BRCA1-228ENST00000618469 COL6A6A6NMZ7 2263 aa15.79■□□□□ 0.12
BRCA1-228ENST00000618469 C2orf81A6NN90 581 aa15.79■□□□□ 0.12
BRCA1-228ENST00000618469 GPR89AB7ZAQ6 455 aa15.79■□□□□ 0.12
BRCA1-228ENST00000618469 D6RAR5 112 aa15.79■□□□□ 0.12
BRCA1-228ENST00000618469 NUDT21O43809 227 aaKnown RBP15.79■□□□□ 0.12
BRCA1-228ENST00000618469 PPFIA2O75334 1257 aa15.79■□□□□ 0.12
BRCA1-228ENST00000618469 PRAMEF1O95521 474 aa15.79■□□□□ 0.12
BRCA1-228ENST00000618469 FGGP02679 453 aa15.79■□□□□ 0.12
BRCA1-228ENST00000618469 GPR89BP0CG08 455 aa15.79■□□□□ 0.12
BRCA1-228ENST00000618469 LPOP22079 712 aaPredicted RBP15.79■□□□□ 0.12
BRCA1-228ENST00000618469 CXCR5P32302 372 aa15.79■□□□□ 0.12
BRCA1-228ENST00000618469 ACTN2P35609 894 aa15.79■□□□□ 0.12
BRCA1-228ENST00000618469 PDX1P52945 283 aa15.79■□□□□ 0.12
BRCA1-228ENST00000618469 CCL7P80098 99 aa15.79■□□□□ 0.12
BRCA1-228ENST00000618469 ITGA9Q13797 1035 aa15.79■□□□□ 0.12
BRCA1-228ENST00000618469 CHRNA6Q15825 494 aa15.79■□□□□ 0.12
BRCA1-228ENST00000618469 ISXQ2M1V0 245 aa15.79■□□□□ 0.12
BRCA1-228ENST00000618469 TBC1D25Q3MII6 688 aa15.79■□□□□ 0.12
BRCA1-228ENST00000618469 KHDC1Q4VXA5 237 aaKnown RBP15.79■□□□□ 0.12
BRCA1-228ENST00000618469 KCTD11Q693B1 232 aa15.79■□□□□ 0.12
BRCA1-228ENST00000618469 SPRED1Q7Z699 444 aa15.79■□□□□ 0.12
BRCA1-228ENST00000618469 OR4K2Q8NGD2 314 aa15.79■□□□□ 0.12
BRCA1-228ENST00000618469 ANP32BQ92688 251 aaKnown RBP15.79■□□□□ 0.12
BRCA1-228ENST00000618469 GFM1Q96RP9 751 aaKnown RBP15.79■□□□□ 0.12
BRCA1-228ENST00000618469 KCNF1Q9H3M0 494 aa15.79■□□□□ 0.12
BRCA1-228ENST00000618469 FEZ2Q9UHY8 353 aaPredicted RBP15.79■□□□□ 0.12
BRCA1-228ENST00000618469 FKBPLQ9UIM3 349 aa15.79■□□□□ 0.12
BRCA1-228ENST00000618469 TMPRSS11EQ9UL52 423 aa15.79■□□□□ 0.12
BRCA1-228ENST00000618469 A0A1W2PQM1 296 aa15.78■□□□□ 0.12
BRCA1-228ENST00000618469 RHPN2P1A8MT19 583 aa15.78■□□□□ 0.12
BRCA1-228ENST00000618469 NTN3O00634 580 aaPredicted RBP15.78■□□□□ 0.12
BRCA1-228ENST00000618469 GAPDHSO14556 408 aaPredicted RBP15.78■□□□□ 0.12
BRCA1-228ENST00000618469 CEP104O60308 925 aa15.78■□□□□ 0.12
BRCA1-228ENST00000618469 CRTAMO95727 393 aa15.78■□□□□ 0.12
BRCA1-228ENST00000618469 AP2A1O95782 977 aa15.78■□□□□ 0.12
BRCA1-228ENST00000618469 MPOP05164 745 aa15.78■□□□□ 0.12
BRCA1-228ENST00000618469 GTF2H3Q13889 308 aa15.78■□□□□ 0.12
BRCA1-228ENST00000618469 SEPT6Q14141 434 aa15.78■□□□□ 0.12
BRCA1-228ENST00000618469 SIX1Q15475 284 aaPredicted RBP15.78■□□□□ 0.12
BRCA1-228ENST00000618469 INSCQ1MX18 579 aa15.78■□□□□ 0.12
BRCA1-228ENST00000618469 DENND5AQ6IQ26 1287 aa15.78■□□□□ 0.12
BRCA1-228ENST00000618469 LRRTM4Q86VH4 590 aa15.78■□□□□ 0.12
BRCA1-228ENST00000618469 C17orf82Q86X59 251 aaPredicted RBP15.78■□□□□ 0.12
BRCA1-228ENST00000618469 TRAPPC5Q8IUR0 188 aa15.78■□□□□ 0.12
BRCA1-228ENST00000618469 ARL14Q8N4G2 192 aa15.78■□□□□ 0.12
BRCA1-228ENST00000618469 CCDC89Q8N998 374 aa15.78■□□□□ 0.12
BRCA1-228ENST00000618469 ATXN7L3BQ96GX2 97 aa15.78■□□□□ 0.12
BRCA1-228ENST00000618469 ZCCHC2Q9C0B9 1178 aaKnown RBP15.78■□□□□ 0.12
BRCA1-228ENST00000618469 LRRN3Q9H3W5 708 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms