RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 SERPINB1P30740 379 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 TTKP33981 857 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 PTPN7P35236 360 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 IDUAP35475 653 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 VBP1P61758 197 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 ESRRGP62508 458 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 OCA2Q04671 838 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 MAPRE1Q15691 268 aaKnown RBP5.54□□□□□ -1.52
CPNE4-214ENST00000617767 TCTN1Q2MV58 587 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 CTXN3Q4LDR2 81 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 PPM1JQ5JR12 505 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 VARS2Q5ST30 1063 aaKnown RBP5.54□□□□□ -1.52
CPNE4-214ENST00000617767 UGT3A1Q6NUS8 523 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 CD300LGQ6UXG3 332 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 FKBP9P1Q75LS8 142 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 CDKL3Q8IVW4 592 aaPredicted RBP5.54□□□□□ -1.52
CPNE4-214ENST00000617767 CCDC36Q8IYA8 594 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 CFAP52Q8N1V2 620 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 SPATA6LQ8N4H0 392 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 IPMKQ8NFU5 416 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 AUTS2Q8WXX7 1259 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 CCDC124Q96CT7 223 aaKnown RBP5.54□□□□□ -1.52
CPNE4-214ENST00000617767 SLC47A1Q96FL8 570 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 ZNF778Q96MU6 729 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 COG8Q96MW5 612 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 KLHL5Q96PQ7 755 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 CHID1Q9BWS9 393 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 TDRD1Q9BXT4 1180 aaKnown RBP5.54□□□□□ -1.52
CPNE4-214ENST00000617767 UNC93B1Q9H1C4 597 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 VPS45Q9NRW7 570 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 PLSCR3Q9NRY6 295 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 ZNF358Q9NW07 568 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 SPATA6Q9NWH7 488 aaPredicted RBP5.54□□□□□ -1.52
CPNE4-214ENST00000617767 PAQR5Q9NXK6 330 aaPredicted RBP5.54□□□□□ -1.52
CPNE4-214ENST00000617767 TAS2R7Q9NYW3 318 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 IL37Q9NZH6 218 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 ADGRE2Q9UHX3 823 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 NUP50Q9UKX7 468 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 LRFN2Q9ULH4 789 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 Q9Y3F1 56 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 PCDHGA2Q9Y5H1 932 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 MYO16Q9Y6X6 1858 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 A0A0G2JMP0 313 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 TRPC5OSA6NMA1 111 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 ZNF839A8K0R7 811 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 H0Y858 1186 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 PLK4O00444 970 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 DPYSL4O14531 572 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 SORBS2O94875 1100 aaKnown RBP5.54□□□□□ -1.52
CPNE4-214ENST00000617767 PGRP06401 933 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 NFKB1P19838 968 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 CYP2C18P33260 490 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 EPHB1P54762 984 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 SRP54P61011 504 aaKnown RBP5.54□□□□□ -1.52
CPNE4-214ENST00000617767 DUSP4Q13115 394 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 PSMD5Q16401 504 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 DUSP7Q16829 419 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 ARMC4Q5T2S8 1044 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 SLX4IPQ5VYV7 408 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 PLEKHM3Q6ZWE6 761 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 CMC1Q7Z7K0 106 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 ZDHHC17Q8IUH5 632 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 THEM5Q8N1Q8 247 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 DCAKDQ8WVC6 231 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 CENPIQ92674 756 aaPredicted RBP5.54□□□□□ -1.52
CPNE4-214ENST00000617767 PABPC5Q96DU9 382 aaKnown RBP5.54□□□□□ -1.52
CPNE4-214ENST00000617767 MFSD3Q96ES6 412 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 NELL2Q99435 816 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 AGAP2Q99490 1192 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 NAA50Q9GZZ1 169 aaKnown RBP5.54□□□□□ -1.52
CPNE4-214ENST00000617767 CRISPLD1Q9H336 500 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 ACSS3Q9H6R3 686 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 CAB39LQ9H9S4 337 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 HMX1Q9NP08 348 aaPredicted RBP5.54□□□□□ -1.52
CPNE4-214ENST00000617767 TEKT2Q9UIF3 430 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 CDH9Q9ULB4 789 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 PADI4Q9UM07 663 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 ACTL7AQ9Y615 435 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 TEX264Q9Y6I9 313 aa5.54□□□□□ -1.52
CPNE4-214ENST00000617767 KNL1Q8NG31 2342 aa5.53□□□□□ -1.52
CPNE4-214ENST00000617767 VWA8A3KMH1 1905 aa5.53□□□□□ -1.52
CPNE4-214ENST00000617767 SLC22A1O15245 554 aa5.53□□□□□ -1.52
CPNE4-214ENST00000617767 NBNO60934 754 aa5.53□□□□□ -1.52
CPNE4-214ENST00000617767 NOL3O60936 208 aaKnown RBP5.53□□□□□ -1.52
CPNE4-214ENST00000617767 PAGE1O75459 146 aa5.53□□□□□ -1.52
CPNE4-214ENST00000617767 SERPINI2O75830 405 aa5.53□□□□□ -1.52
CPNE4-214ENST00000617767 TOMM70O94826 608 aa5.53□□□□□ -1.52
CPNE4-214ENST00000617767 IRF1P10914 325 aa5.53□□□□□ -1.52
CPNE4-214ENST00000617767 CBLP22681 906 aa5.53□□□□□ -1.52
CPNE4-214ENST00000617767 TGM1P22735 817 aa5.53□□□□□ -1.52
CPNE4-214ENST00000617767 GABRB3P28472 473 aa5.53□□□□□ -1.52
CPNE4-214ENST00000617767 HOXC8P31273 242 aa5.53□□□□□ -1.52
CPNE4-214ENST00000617767 AVPR1AP37288 418 aa5.53□□□□□ -1.52
CPNE4-214ENST00000617767 VEGFBP49765 207 aa5.53□□□□□ -1.52
CPNE4-214ENST00000617767 ARFIP1P53367 373 aa5.53□□□□□ -1.52
CPNE4-214ENST00000617767 CDKL1Q00532 357 aa5.53□□□□□ -1.52
CPNE4-214ENST00000617767 RELQ04864 619 aaPredicted RBP5.53□□□□□ -1.52
CPNE4-214ENST00000617767 CCINQ13939 588 aa5.53□□□□□ -1.52
CPNE4-214ENST00000617767 SEMA3AQ14563 771 aa5.53□□□□□ -1.52
CPNE4-214ENST00000617767 TBRG1Q3YBR2 411 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms