RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 PTGIRP43119 386 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 MARSP56192 900 aaKnown RBP13.68□□□□□ -0.22
CHD1-212ENST00000614616 OMDQ99983 421 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 NUDT15Q9NV35 164 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 COMMD3Q9UBI1 195 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 TPSB2P20231 275 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 DGKAP23743 735 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 PRKD1Q15139 912 aaPredicted RBP13.68□□□□□ -0.22
CHD1-212ENST00000614616 TPSAB1Q15661 275 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 NPNTQ6UXI9 565 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 IFNL1Q8IU54 200 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 LRRC57Q8N9N7 239 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 PADI2Q9Y2J8 665 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.67□□□□□ -0.22
CHD1-212ENST00000614616 C7P10643 843 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 TAF6P49848 677 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 ZNF177Q13360 481 aaPredicted RBP13.67□□□□□ -0.22
CHD1-212ENST00000614616 ORC1Q13415 861 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 NFE2L1Q14494 772 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 PTPRNQ16849 979 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 TTYH2Q9BSA4 534 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 TRIM2Q9C040 744 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 TSPAN16Q9UKR8 245 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 AGLP35573 1532 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 RAD17O75943 681 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 HTR2AP28223 471 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 ZNF143P52747 638 aaPredicted RBP13.67□□□□□ -0.22
CHD1-212ENST00000614616 ADAM8P78325 824 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 DAG1Q14118 895 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 VPS26BQ4G0F5 336 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 CRTC2Q53ET0 693 aaPredicted RBP13.67□□□□□ -0.22
CHD1-212ENST00000614616 STXBP5Q5T5C0 1151 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 PIGKQ92643 395 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 ENTPD4Q9Y227 616 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 KCNA5P22460 613 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 TTPAP49638 278 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 PRAMEF17Q5VTA0 474 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 DSG4Q86SJ6 1040 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 SYVN1Q86TM6 617 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 SCML4Q8N228 414 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 LPAR1Q92633 364 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 PPA2Q9H2U2 334 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 KCNIP3Q9Y2W7 256 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 THEGLP0DJG4 465 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 TRIM23P36406 574 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 LIMK2P53671 638 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 PPATQ06203 517 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 MYLK3Q32MK0 819 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 CCDC32Q9BV29 185 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 PLEKHA6Q9Y2H5 1048 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 IFT52Q9Y366 437 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 COL15A1P39059 1388 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 TMEM2Q9UHN6 1383 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 H0YJX3 145 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 SCELO95171 688 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 HOXC8P31273 242 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 ETV1P50549 477 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 AMHR2Q16671 573 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 GPR65Q8IYL9 337 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 DCPSQ96C86 337 aaKnown RBP13.67□□□□□ -0.22
CHD1-212ENST00000614616 ZNF334Q9HCZ1 680 aaPredicted RBP13.67□□□□□ -0.22
CHD1-212ENST00000614616 FAM155BO75949 473 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 SERPINA3P01011 423 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 HIST1H2ABP04908 130 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 PEX6Q13608 980 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 IQCCQ4KMZ1 466 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 C10orf120Q5SQS8 335 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 SLC30A10Q6XR72 485 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 HIST3H2AQ7L7L0 130 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 HIST1H2ACQ93077 130 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 FAM84BQ96KN1 310 aaPredicted RBP13.67□□□□□ -0.22
CHD1-212ENST00000614616 PWWP2AQ96N64 755 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 GAKO14976 1311 aa13.67□□□□□ -0.22
CHD1-212ENST00000614616 FAM86C2PA6NEL3 165 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 FPGTO14772 594 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 MYL3P08590 195 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 LRRC55Q6ZSA7 311 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 DNAJB7Q7Z6W7 309 aaPredicted RBP13.66□□□□□ -0.22
CHD1-212ENST00000614616 GPR180Q86V85 440 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 CHCHD4Q8N4Q1 142 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 NXPE2Q96DL1 559 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 POLR3HQ9Y535 204 aaPredicted RBP13.66□□□□□ -0.22
CHD1-212ENST00000614616 NDUFB10O96000 172 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 CCR1P32246 355 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 SLC11A2P49281 568 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 LSM12Q3MHD2 195 aaKnown RBP13.66□□□□□ -0.22
CHD1-212ENST00000614616 ARL13AQ5H913 290 aaPredicted RBP13.66□□□□□ -0.22
CHD1-212ENST00000614616 APTXQ7Z2E3 356 aaKnown RBP13.66□□□□□ -0.22
CHD1-212ENST00000614616 HYLS1Q96M11 299 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 RNF157Q96PX1 679 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 SPATA9Q9BWV2 254 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 MKRN2Q9H000 416 aaKnown RBP13.66□□□□□ -0.22
CHD1-212ENST00000614616 GULP1Q9UBP9 304 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 PRR12Q9ULL5 1215 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 PCDHGB3Q9Y5G1 929 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 CACNA1SQ13698 1873 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 ARFGEF2Q9Y6D5 1785 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 ANKDD1BA6NHY2 528 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 H0YAE9 185 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 DLGAP1O14490 977 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms