RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 OR13J1Q8NGT2 312 aa13.12□□□□□ -0.31
MDC1-209ENST00000613547 OR4L1Q8NH43 312 aa13.12□□□□□ -0.31
MDC1-209ENST00000613547 LRRC39Q96DD0 335 aa13.12□□□□□ -0.31
MDC1-209ENST00000613547 STAMBPL1Q96FJ0 436 aa13.12□□□□□ -0.31
MDC1-209ENST00000613547 SCARF2Q96GP6 870 aaPredicted RBP13.12□□□□□ -0.31
MDC1-209ENST00000613547 SGSM3Q96HU1 749 aa13.12□□□□□ -0.31
MDC1-209ENST00000613547 ZNF514Q96K75 400 aaPredicted RBP13.12□□□□□ -0.31
MDC1-209ENST00000613547 ZNF778Q96MU6 729 aa13.12□□□□□ -0.31
MDC1-209ENST00000613547 CDC6Q99741 560 aa13.12□□□□□ -0.31
MDC1-209ENST00000613547 LRRC1Q9BTT6 524 aa13.12□□□□□ -0.31
MDC1-209ENST00000613547 DUSP23Q9BVJ7 150 aa13.12□□□□□ -0.31
MDC1-209ENST00000613547 GSDMCQ9BYG8 508 aa13.12□□□□□ -0.31
MDC1-209ENST00000613547 TCEAL2Q9H3H9 227 aaPredicted RBP13.12□□□□□ -0.31
MDC1-209ENST00000613547 ARFGAP3Q9NP61 516 aa13.12□□□□□ -0.31
MDC1-209ENST00000613547 EVA1BQ9NVM1 165 aa13.12□□□□□ -0.31
MDC1-209ENST00000613547 UCKL1Q9NWZ5 548 aa13.12□□□□□ -0.31
MDC1-209ENST00000613547 NLGN3Q9NZ94 848 aa13.12□□□□□ -0.31
MDC1-209ENST00000613547 ATXN10Q9UBB4 475 aa13.12□□□□□ -0.31
MDC1-209ENST00000613547 SLC2A6Q9UGQ3 507 aa13.12□□□□□ -0.31
MDC1-209ENST00000613547 PNMA8BQ9ULN7 279 aaPredicted RBP13.12□□□□□ -0.31
MDC1-209ENST00000613547 GPSM3Q9Y4H4 160 aa13.12□□□□□ -0.31
MDC1-209ENST00000613547 TRBV5-4A0A0C4DH59 114 aa13.11□□□□□ -0.31
MDC1-209ENST00000613547 TPP1O14773 563 aa13.11□□□□□ -0.31
MDC1-209ENST00000613547 PFDN6O15212 129 aa13.11□□□□□ -0.31
MDC1-209ENST00000613547 FFAR2O15552 330 aa13.11□□□□□ -0.31
MDC1-209ENST00000613547 GPR39O43194 453 aa13.11□□□□□ -0.31
MDC1-209ENST00000613547 GRID2O43424 1007 aa13.11□□□□□ -0.31
MDC1-209ENST00000613547 SH3BP5O60239 455 aa13.11□□□□□ -0.31
MDC1-209ENST00000613547 NUAK1O60285 661 aa13.11□□□□□ -0.31
MDC1-209ENST00000613547 DNAJC6O75061 913 aa13.11□□□□□ -0.31
MDC1-209ENST00000613547 MTX2O75431 263 aa13.11□□□□□ -0.31
MDC1-209ENST00000613547 GOT2P00505 430 aaKnown RBP13.11□□□□□ -0.31
MDC1-209ENST00000613547 ZNF8P17098 575 aaPredicted RBP13.11□□□□□ -0.31
MDC1-209ENST00000613547 VCLP18206 1134 aa13.11□□□□□ -0.31
MDC1-209ENST00000613547 PGAM1P18669 254 aa13.11□□□□□ -0.31
MDC1-209ENST00000613547 CSRP1P21291 193 aaKnown RBP13.11□□□□□ -0.31
MDC1-209ENST00000613547 NMBRP28336 390 aa13.11□□□□□ -0.31
MDC1-209ENST00000613547 PI4KAP42356 2102 aa13.11□□□□□ -0.31
MDC1-209ENST00000613547 BBS9Q3SYG4 887 aa13.11□□□□□ -0.31
MDC1-209ENST00000613547 PYCR3Q53H96 274 aa13.11□□□□□ -0.31
MDC1-209ENST00000613547 KIAA0930Q6ICG6 404 aaPredicted RBP13.11□□□□□ -0.31
MDC1-209ENST00000613547 LVRNQ6Q4G3 990 aa13.11□□□□□ -0.31
MDC1-209ENST00000613547 CERS6Q6ZMG9 384 aa13.11□□□□□ -0.31
MDC1-209ENST00000613547 CENPUQ71F23 418 aa13.11□□□□□ -0.31
MDC1-209ENST00000613547 KANSL1Q7Z3B3 1105 aa13.11□□□□□ -0.31
MDC1-209ENST00000613547 TAF8Q7Z7C8 310 aa13.11□□□□□ -0.31
MDC1-209ENST00000613547 ADGRG6Q86SQ4 1221 aa13.11□□□□□ -0.31
MDC1-209ENST00000613547 LRRTM4Q86VH4 590 aa13.11□□□□□ -0.31
MDC1-209ENST00000613547 SERPINA9Q86WD7 417 aa13.11□□□□□ -0.31
MDC1-209ENST00000613547 CCNJLQ8IV13 435 aa13.11□□□□□ -0.31
MDC1-209ENST00000613547 MPP5Q8N3R9 675 aa13.11□□□□□ -0.31
MDC1-209ENST00000613547 SLC25A45Q8N413 288 aa13.11□□□□□ -0.31
MDC1-209ENST00000613547 EID2Q8N6I1 236 aa13.11□□□□□ -0.31
MDC1-209ENST00000613547 OTUD6BQ8N6M0 293 aa13.11□□□□□ -0.31
MDC1-209ENST00000613547 GABPB2Q8TAK5 448 aaPredicted RBP13.11□□□□□ -0.31
MDC1-209ENST00000613547 GLMNQ92990 594 aa13.11□□□□□ -0.31
MDC1-209ENST00000613547 CARD6Q9BX69 1037 aa13.11□□□□□ -0.31
MDC1-209ENST00000613547 TMEM168Q9H0V1 697 aa13.11□□□□□ -0.31
MDC1-209ENST00000613547 FAM96AQ9H5X1 160 aa13.11□□□□□ -0.31
MDC1-209ENST00000613547 TREX1Q9NSU2 369 aa13.11□□□□□ -0.31
MDC1-209ENST00000613547 CATSPERZQ9NTU4 200 aa13.11□□□□□ -0.31
MDC1-209ENST00000613547 ZDHHC3Q9NYG2 299 aa13.11□□□□□ -0.31
MDC1-209ENST00000613547 FTSJ1Q9UET6 329 aa13.11□□□□□ -0.31
MDC1-209ENST00000613547 TMPRSS11EQ9UL52 423 aa13.11□□□□□ -0.31
MDC1-209ENST00000613547 RPS6KL1Q9Y6S9 549 aa13.11□□□□□ -0.31
MDC1-209ENST00000613547 LRRK1Q38SD2 2015 aa13.11□□□□□ -0.31
MDC1-209ENST00000613547 RALGAPA1Q6GYQ0 2036 aa13.11□□□□□ -0.31
MDC1-209ENST00000613547 FRYLO94915 3013 aa13.11□□□□□ -0.31
MDC1-209ENST00000613547 KNL1Q8NG31 2342 aa13.11□□□□□ -0.31
MDC1-209ENST00000613547 CEP250Q9BV73 2442 aa13.1□□□□□ -0.31
MDC1-209ENST00000613547 USP34Q70CQ2 3546 aa13.1□□□□□ -0.31
MDC1-209ENST00000613547 F8W8V4 182 aa13.1□□□□□ -0.31
MDC1-209ENST00000613547 CHUKO15111 745 aa13.1□□□□□ -0.31
MDC1-209ENST00000613547 KMOO15229 486 aa13.1□□□□□ -0.31
MDC1-209ENST00000613547 VAPBO95292 243 aa13.1□□□□□ -0.31
MDC1-209ENST00000613547 TTC4O95801 387 aa13.1□□□□□ -0.31
MDC1-209ENST00000613547 ACRV1P26436 265 aa13.1□□□□□ -0.31
MDC1-209ENST00000613547 FOXN2P32314 431 aa13.1□□□□□ -0.31
MDC1-209ENST00000613547 DRG2P55039 364 aaKnown RBP13.1□□□□□ -0.31
MDC1-209ENST00000613547 DHX9Q08211 1270 aaKnown RBP13.1□□□□□ -0.31
MDC1-209ENST00000613547 ITIH4Q14624 930 aa13.1□□□□□ -0.31
MDC1-209ENST00000613547 INSCQ1MX18 579 aa13.1□□□□□ -0.31
MDC1-209ENST00000613547 DEFB133Q30KQ1 61 aa13.1□□□□□ -0.31
MDC1-209ENST00000613547 FNBP1LQ5T0N5 605 aa13.1□□□□□ -0.31
MDC1-209ENST00000613547 ZNF648Q5T619 568 aaPredicted RBP13.1□□□□□ -0.31
MDC1-209ENST00000613547 KCTD16Q68DU8 428 aa13.1□□□□□ -0.31
MDC1-209ENST00000613547 MRNIPQ6NTE8 343 aa13.1□□□□□ -0.31
MDC1-209ENST00000613547 PSAPL1Q6NUJ1 521 aa13.1□□□□□ -0.31
MDC1-209ENST00000613547 ZCCHC8Q6NZY4 707 aaKnown RBP13.1□□□□□ -0.31
MDC1-209ENST00000613547 CRTC3Q6UUV7 619 aa13.1□□□□□ -0.31
MDC1-209ENST00000613547 CHST15Q7LFX5 561 aaPredicted RBP13.1□□□□□ -0.31
MDC1-209ENST00000613547 SDCCAG8Q86SQ7 713 aaPredicted RBP13.1□□□□□ -0.31
MDC1-209ENST00000613547 PIP4P1Q86T03 277 aa13.1□□□□□ -0.31
MDC1-209ENST00000613547 TMEM135Q86UB9 458 aa13.1□□□□□ -0.31
MDC1-209ENST00000613547 TRAPPC5Q8IUR0 188 aa13.1□□□□□ -0.31
MDC1-209ENST00000613547 NOA1Q8NC60 698 aaKnown RBP13.1□□□□□ -0.31
MDC1-209ENST00000613547 OR4C6Q8NH72 309 aa13.1□□□□□ -0.31
MDC1-209ENST00000613547 ZNF669Q96BR6 464 aaPredicted RBP13.1□□□□□ -0.31
MDC1-209ENST00000613547 MFSD3Q96ES6 412 aa13.1□□□□□ -0.31
MDC1-209ENST00000613547 SIGLEC10Q96LC7 697 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms