RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 MAMLD1Q13495 774 aa16.95■□□□□ 0.3
CSNK1E-215ENST00000612795 TUBB3Q13509 450 aa16.95■□□□□ 0.3
CSNK1E-215ENST00000612795 BECN1Q14457 450 aa16.95■□□□□ 0.3
CSNK1E-215ENST00000612795 INSCQ1MX18 579 aa16.95■□□□□ 0.3
CSNK1E-215ENST00000612795 IRGCQ6NXR0 463 aa16.95■□□□□ 0.3
CSNK1E-215ENST00000612795 CYP4V2Q6ZWL3 525 aaPredicted RBP16.95■□□□□ 0.3
CSNK1E-215ENST00000612795 SYVN1Q86TM6 617 aa16.95■□□□□ 0.3
CSNK1E-215ENST00000612795 TICAM1Q8IUC6 712 aa16.95■□□□□ 0.3
CSNK1E-215ENST00000612795 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.95■□□□□ 0.3
CSNK1E-215ENST00000612795 RSC1A1Q92681 617 aa16.95■□□□□ 0.3
CSNK1E-215ENST00000612795 ZDHHC12Q96GR4 267 aa16.95■□□□□ 0.3
CSNK1E-215ENST00000612795 GPR87Q9BY21 358 aa16.95■□□□□ 0.3
CSNK1E-215ENST00000612795 POLR1EQ9GZS1 481 aaKnown RBP16.95■□□□□ 0.3
CSNK1E-215ENST00000612795 RARRES3Q9UL19 164 aa16.95■□□□□ 0.3
CSNK1E-215ENST00000612795 CNOT6Q9ULM6 557 aaKnown RBP16.95■□□□□ 0.3
CSNK1E-215ENST00000612795 PRRC2CQ9Y520 2896 aaKnown RBP16.95■□□□□ 0.3
CSNK1E-215ENST00000612795 CELSR2Q9HCU4 2923 aa16.94■□□□□ 0.3
CSNK1E-215ENST00000612795 KIF1CO43896 1103 aaKnown RBP16.94■□□□□ 0.3
CSNK1E-215ENST00000612795 NUAK1O60285 661 aa16.94■□□□□ 0.3
CSNK1E-215ENST00000612795 TIAF1O95411 115 aa16.94■□□□□ 0.3
CSNK1E-215ENST00000612795 XRCC1P18887 633 aaPredicted RBP16.94■□□□□ 0.3
CSNK1E-215ENST00000612795 CA4P22748 312 aa16.94■□□□□ 0.3
CSNK1E-215ENST00000612795 AMPD1P23109 780 aa16.94■□□□□ 0.3
CSNK1E-215ENST00000612795 UBE2HP62256 183 aa16.94■□□□□ 0.3
CSNK1E-215ENST00000612795 IL10RAQ13651 578 aa16.94■□□□□ 0.3
CSNK1E-215ENST00000612795 KRT31Q15323 416 aa16.94■□□□□ 0.3
CSNK1E-215ENST00000612795 SEPT7Q16181 437 aaKnown RBP16.94■□□□□ 0.3
CSNK1E-215ENST00000612795 PLA2G4EQ3MJ16 856 aa16.94■□□□□ 0.3
CSNK1E-215ENST00000612795 TDRD12Q587J7 1177 aaKnown RBP16.94■□□□□ 0.3
CSNK1E-215ENST00000612795 HENMT1Q5T8I9 393 aaKnown RBP16.94■□□□□ 0.3
CSNK1E-215ENST00000612795 PAPD7Q5XG87 772 aaKnown RBP16.94■□□□□ 0.3
CSNK1E-215ENST00000612795 JMJD6Q6NYC1 403 aaPredicted RBP16.94■□□□□ 0.3
CSNK1E-215ENST00000612795 RAVER1Q8IY67 606 aaKnown RBP16.94■□□□□ 0.3
CSNK1E-215ENST00000612795 AOPEPQ8N6M6 819 aa16.94■□□□□ 0.3
CSNK1E-215ENST00000612795 MFRPQ9BY79 579 aa16.94■□□□□ 0.3
CSNK1E-215ENST00000612795 ARFGAP3Q9NP61 516 aa16.94■□□□□ 0.3
CSNK1E-215ENST00000612795 MLXIPLQ9NP71 852 aa16.94■□□□□ 0.3
CSNK1E-215ENST00000612795 ETNK2Q9NVF9 386 aa16.94■□□□□ 0.3
CSNK1E-215ENST00000612795 PKD2L2Q9NZM6 624 aa16.94■□□□□ 0.3
CSNK1E-215ENST00000612795 SCHIP1Q9P0W5 487 aaPredicted RBP16.94■□□□□ 0.3
CSNK1E-215ENST00000612795 ATXN10Q9UBB4 475 aa16.94■□□□□ 0.3
CSNK1E-215ENST00000612795 ERRFI1Q9UJM3 462 aaPredicted RBP16.94■□□□□ 0.3
CSNK1E-215ENST00000612795 SRPK3Q9UPE1 567 aa16.94■□□□□ 0.3
CSNK1E-215ENST00000612795 CHKBQ9Y259 395 aa16.94■□□□□ 0.3
CSNK1E-215ENST00000612795 SIK3Q9Y2K2 1263 aa16.94■□□□□ 0.3
CSNK1E-215ENST00000612795 TTLL3Q9Y4R7 772 aa16.94■□□□□ 0.3
CSNK1E-215ENST00000612795 PCDHGB7Q9Y5F8 929 aa16.94■□□□□ 0.3
CSNK1E-215ENST00000612795 LRBAP50851 2863 aa16.93■□□□□ 0.3
CSNK1E-215ENST00000612795 C1orf232A0A0U1RR37 186 aa16.93■□□□□ 0.3
CSNK1E-215ENST00000612795 TMCO5BA8MYB1 307 aa16.93■□□□□ 0.3
CSNK1E-215ENST00000612795 LDLRP01130 860 aa16.93■□□□□ 0.3
CSNK1E-215ENST00000612795 NELFEP18615 380 aaKnown RBP16.93■□□□□ 0.3
CSNK1E-215ENST00000612795 SLC19A1P41440 591 aa16.93■□□□□ 0.3
CSNK1E-215ENST00000612795 PTGIRP43119 386 aa16.93■□□□□ 0.3
CSNK1E-215ENST00000612795 CLCNKAP51800 687 aa16.93■□□□□ 0.3
CSNK1E-215ENST00000612795 PDE1BQ01064 536 aa16.93■□□□□ 0.3
CSNK1E-215ENST00000612795 SMTNL2Q2TAL5 461 aa16.93■□□□□ 0.3
CSNK1E-215ENST00000612795 PWWP2BQ6NUJ5 590 aa16.93■□□□□ 0.3
CSNK1E-215ENST00000612795 PPP1R2P3Q6NXS1 205 aa16.93■□□□□ 0.3
CSNK1E-215ENST00000612795 FAM199XQ6PEV8 388 aaPredicted RBP16.93■□□□□ 0.3
CSNK1E-215ENST00000612795 CRTC3Q6UUV7 619 aa16.93■□□□□ 0.3
CSNK1E-215ENST00000612795 SIDT2Q8NBJ9 832 aaKnown RBP16.93■□□□□ 0.3
CSNK1E-215ENST00000612795 LPCAT1Q8NF37 534 aa16.93■□□□□ 0.3
CSNK1E-215ENST00000612795 KLHL6Q8WZ60 621 aa16.93■□□□□ 0.3
CSNK1E-215ENST00000612795 TCTN2Q96GX1 697 aa16.93■□□□□ 0.3
CSNK1E-215ENST00000612795 C5orf34Q96MH7 638 aa16.93■□□□□ 0.3
CSNK1E-215ENST00000612795 OR2AG1Q9H205 316 aa16.93■□□□□ 0.3
CSNK1E-215ENST00000612795 FAM83DQ9H4H8 585 aa16.93■□□□□ 0.3
CSNK1E-215ENST00000612795 IGSF5Q9NSI5 407 aa16.93■□□□□ 0.3
CSNK1E-215ENST00000612795 POT1Q9NUX5 634 aa16.93■□□□□ 0.3
CSNK1E-215ENST00000612795 ZNF624Q9P2J8 865 aaPredicted RBP16.93■□□□□ 0.3
CSNK1E-215ENST00000612795 ATP1A3P13637 1013 aa16.92■□□□□ 0.3
CSNK1E-215ENST00000612795 ZNF8P17098 575 aaPredicted RBP16.92■□□□□ 0.3
CSNK1E-215ENST00000612795 SPINT3P49223 89 aa16.92■□□□□ 0.3
CSNK1E-215ENST00000612795 DSC2Q02487 901 aa16.92■□□□□ 0.3
CSNK1E-215ENST00000612795 DPYSL2Q16555 572 aa16.92■□□□□ 0.3
CSNK1E-215ENST00000612795 ZNF569Q5MCW4 686 aa16.92■□□□□ 0.3
CSNK1E-215ENST00000612795 SLC6A19Q695T7 634 aa16.92■□□□□ 0.3
CSNK1E-215ENST00000612795 PLEKHA7Q6IQ23 1121 aa16.92■□□□□ 0.3
CSNK1E-215ENST00000612795 RHOT1Q8IXI2 618 aa16.92■□□□□ 0.3
CSNK1E-215ENST00000612795 SRRM1Q8IYB3 904 aaKnown RBP16.92■□□□□ 0.3
CSNK1E-215ENST00000612795 Q8NA96 180 aa16.92■□□□□ 0.3
CSNK1E-215ENST00000612795 CCHCR1Q8TD31 782 aa16.92■□□□□ 0.3
CSNK1E-215ENST00000612795 HSPH1Q92598 858 aa16.92■□□□□ 0.3
CSNK1E-215ENST00000612795 PHF12Q96QT6 1004 aa16.92■□□□□ 0.3
CSNK1E-215ENST00000612795 WDR24Q96S15 920 aa16.92■□□□□ 0.3
CSNK1E-215ENST00000612795 TDRD1Q9BXT4 1180 aaKnown RBP16.92■□□□□ 0.3
CSNK1E-215ENST00000612795 AKIRIN1Q9H9L7 192 aaPredicted RBP16.92■□□□□ 0.3
CSNK1E-215ENST00000612795 TAS2R14Q9NYV8 317 aa16.92■□□□□ 0.3
CSNK1E-215ENST00000612795 DNAJC16Q9Y2G8 782 aa16.92■□□□□ 0.3
CSNK1E-215ENST00000612795 ANKRD17O75179 2603 aaKnown RBP16.92■□□□□ 0.3
CSNK1E-215ENST00000612795 TMEM191CA6NGB0 347 aa16.91■□□□□ 0.3
CSNK1E-215ENST00000612795 CCDC172P0C7W6 258 aa16.91■□□□□ 0.3
CSNK1E-215ENST00000612795 ELAVL4P26378 380 aaKnown RBP16.91■□□□□ 0.3
CSNK1E-215ENST00000612795 ARL4DP49703 201 aa16.91■□□□□ 0.3
CSNK1E-215ENST00000612795 ACY1Q03154 408 aa16.91■□□□□ 0.3
CSNK1E-215ENST00000612795 GPR18Q14330 331 aa16.91■□□□□ 0.3
CSNK1E-215ENST00000612795 KCNAB1Q14722 419 aa16.91■□□□□ 0.3
CSNK1E-215ENST00000612795 NR6A1Q15406 480 aa16.91■□□□□ 0.3
CSNK1E-215ENST00000612795 ZNF648Q5T619 568 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms