RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 SERPINB6P35237 376 aa23.09■■□□□ 1.29
MMP28-203ENST00000612672 DNASE1L3Q13609 305 aa23.09■■□□□ 1.29
MMP28-203ENST00000612672 QPCTQ16769 361 aa23.09■■□□□ 1.29
MMP28-203ENST00000612672 RBM43Q6ZSC3 357 aaKnown RBP23.09■■□□□ 1.29
MMP28-203ENST00000612672 CPNE8Q86YQ8 564 aa23.09■■□□□ 1.29
MMP28-203ENST00000612672 RASGRP3Q8IV61 690 aa23.09■■□□□ 1.29
MMP28-203ENST00000612672 NDUFAF2Q8N183 169 aa23.09■■□□□ 1.29
MMP28-203ENST00000612672 CARD9Q9H257 536 aa23.09■■□□□ 1.29
MMP28-203ENST00000612672 OSGEPL1Q9H4B0 414 aa23.09■■□□□ 1.29
MMP28-203ENST00000612672 RMI1Q9H9A7 625 aa23.09■■□□□ 1.29
MMP28-203ENST00000612672 UCK1Q9HA47 277 aa23.09■■□□□ 1.29
MMP28-203ENST00000612672 LNPEPQ9UIQ6 1025 aa23.09■■□□□ 1.29
MMP28-203ENST00000612672 PCDHGA6Q9Y5G7 932 aa23.09■■□□□ 1.29
MMP28-203ENST00000612672 SPAG6O75602 509 aa23.08■■□□□ 1.29
MMP28-203ENST00000612672 AGFG2O95081 481 aa23.08■■□□□ 1.29
MMP28-203ENST00000612672 MMP2P08253 660 aa23.08■■□□□ 1.29
MMP28-203ENST00000612672 FGF5P12034 268 aa23.08■■□□□ 1.29
MMP28-203ENST00000612672 SLC2A4P14672 509 aa23.08■■□□□ 1.29
MMP28-203ENST00000612672 BRAFP15056 766 aa23.08■■□□□ 1.29
MMP28-203ENST00000612672 XRCC1P18887 633 aaPredicted RBP23.08■■□□□ 1.29
MMP28-203ENST00000612672 GARSP41250 739 aaKnown RBP23.08■■□□□ 1.29
MMP28-203ENST00000612672 CLCNKAP51800 687 aa23.08■■□□□ 1.29
MMP28-203ENST00000612672 RPS18P62269 152 aaKnown RBP23.08■■□□□ 1.29
MMP28-203ENST00000612672 MYL5Q02045 173 aa23.08■■□□□ 1.29
MMP28-203ENST00000612672 GALNT2Q10471 571 aa23.08■■□□□ 1.29
MMP28-203ENST00000612672 CHAF1BQ13112 559 aa23.08■■□□□ 1.29
MMP28-203ENST00000612672 SEPT7Q16181 437 aaKnown RBP23.08■■□□□ 1.29
MMP28-203ENST00000612672 NADK2Q4G0N4 442 aa23.08■■□□□ 1.29
MMP28-203ENST00000612672 BOLA3Q53S33 107 aa23.08■■□□□ 1.29
MMP28-203ENST00000612672 NCBP2-AS2Q69YL0 99 aa23.08■■□□□ 1.29
MMP28-203ENST00000612672 PPP1R2P3Q6NXS1 205 aa23.08■■□□□ 1.29
MMP28-203ENST00000612672 CRTC3Q6UUV7 619 aa23.08■■□□□ 1.29
MMP28-203ENST00000612672 PHYKPLQ8IUZ5 450 aa23.08■■□□□ 1.29
MMP28-203ENST00000612672 AOPEPQ8N6M6 819 aa23.08■■□□□ 1.29
MMP28-203ENST00000612672 BRD8Q9H0E9 1235 aa23.08■■□□□ 1.29
MMP28-203ENST00000612672 FAM83DQ9H4H8 585 aa23.08■■□□□ 1.29
MMP28-203ENST00000612672 PCDH9Q9HC56 1237 aa23.08■■□□□ 1.29
MMP28-203ENST00000612672 SCINQ9Y6U3 715 aa23.08■■□□□ 1.29
MMP28-203ENST00000612672 PIPSLA2A3N6 862 aa23.07■■□□□ 1.28
MMP28-203ENST00000612672 OR5K4A6NMS3 321 aa23.07■■□□□ 1.28
MMP28-203ENST00000612672 CCDC172P0C7W6 258 aa23.07■■□□□ 1.28
MMP28-203ENST00000612672 GZMAP12544 262 aa23.07■■□□□ 1.28
MMP28-203ENST00000612672 SEMA5AQ13591 1074 aa23.07■■□□□ 1.28
MMP28-203ENST00000612672 LAMB3Q13751 1172 aa23.07■■□□□ 1.28
MMP28-203ENST00000612672 ASIC2Q16515 512 aa23.07■■□□□ 1.28
MMP28-203ENST00000612672 PRSS42Q7Z5A4 293 aa23.07■■□□□ 1.28
MMP28-203ENST00000612672 ADGRG6Q86SQ4 1221 aa23.07■■□□□ 1.28
MMP28-203ENST00000612672 APLFQ8IW19 511 aaPredicted RBP23.07■■□□□ 1.28
MMP28-203ENST00000612672 CPT1CQ8TCG5 803 aa23.07■■□□□ 1.28
MMP28-203ENST00000612672 TEKT4Q8WW24 435 aa23.07■■□□□ 1.28
MMP28-203ENST00000612672 ACTL8Q9H568 366 aa23.07■■□□□ 1.28
MMP28-203ENST00000612672 RBM22Q9NW64 420 aaKnown RBP eCLIP23.07■■□□□ 1.28
MMP28-203ENST00000612672 MYO6Q9UM54 1294 aa23.07■■□□□ 1.28
MMP28-203ENST00000612672 PCSK5Q92824 1860 aa23.07■■□□□ 1.28
MMP28-203ENST00000612672 MATN3O15232 486 aa23.06■■□□□ 1.28
MMP28-203ENST00000612672 CAPZBP47756 277 aa23.06■■□□□ 1.28
MMP28-203ENST00000612672 ARSEP51690 589 aa23.06■■□□□ 1.28
MMP28-203ENST00000612672 KHDC1Q4VXA5 237 aaKnown RBP23.06■■□□□ 1.28
MMP28-203ENST00000612672 PRR30Q53SZ7 412 aaPredicted RBP23.06■■□□□ 1.28
MMP28-203ENST00000612672 ALS2CLQ60I27 953 aa23.06■■□□□ 1.28
MMP28-203ENST00000612672 FAM92BQ6ZTR7 304 aa23.06■■□□□ 1.28
MMP28-203ENST00000612672 RAVER1Q8IY67 606 aaKnown RBP23.06■■□□□ 1.28
MMP28-203ENST00000612672 GALNT11Q8NCW6 608 aa23.06■■□□□ 1.28
MMP28-203ENST00000612672 GPR26Q8NDV2 337 aa23.06■■□□□ 1.28
MMP28-203ENST00000612672 FAM71BQ8TC56 605 aa23.06■■□□□ 1.28
MMP28-203ENST00000612672 KLHL6Q8WZ60 621 aa23.06■■□□□ 1.28
MMP28-203ENST00000612672 LHX9Q9NQ69 397 aa23.06■■□□□ 1.28
MMP28-203ENST00000612672 DNAJC16Q9Y2G8 782 aa23.06■■□□□ 1.28
MMP28-203ENST00000612672 OR52A4PA6NMU1 304 aa23.05■■□□□ 1.28
MMP28-203ENST00000612672 TTLL8A6PVC2 850 aa23.05■■□□□ 1.28
MMP28-203ENST00000612672 CHUKO15111 745 aa23.05■■□□□ 1.28
MMP28-203ENST00000612672 VPS4BO75351 444 aa23.05■■□□□ 1.28
MMP28-203ENST00000612672 RASSF9O75901 435 aa23.05■■□□□ 1.28
MMP28-203ENST00000612672 SKILP12757 684 aa23.05■■□□□ 1.28
MMP28-203ENST00000612672 PRKCIP41743 596 aa23.05■■□□□ 1.28
MMP28-203ENST00000612672 IL10RAQ13651 578 aa23.05■■□□□ 1.28
MMP28-203ENST00000612672 IL11RAQ14626 422 aa23.05■■□□□ 1.28
MMP28-203ENST00000612672 KCNAB1Q14722 419 aa23.05■■□□□ 1.28
MMP28-203ENST00000612672 FHL5Q5TD97 284 aa23.05■■□□□ 1.28
MMP28-203ENST00000612672 FAM199XQ6PEV8 388 aaPredicted RBP23.05■■□□□ 1.28
MMP28-203ENST00000612672 CERS6Q6ZMG9 384 aa23.05■■□□□ 1.28
MMP28-203ENST00000612672 ZNF547Q8IVP9 402 aa23.05■■□□□ 1.28
MMP28-203ENST00000612672 ANKRD20A12PQ8NF67 263 aa23.05■■□□□ 1.28
MMP28-203ENST00000612672 LMBRD1Q9NUN5 540 aa23.05■■□□□ 1.28
MMP28-203ENST00000612672 PKD2L2Q9NZM6 624 aa23.05■■□□□ 1.28
MMP28-203ENST00000612672 KCND3Q9UK17 655 aa23.05■■□□□ 1.28
MMP28-203ENST00000612672 DNPEPQ9ULA0 475 aa23.05■■□□□ 1.28
MMP28-203ENST00000612672 VPS4AQ9UN37 437 aa23.05■■□□□ 1.28
MMP28-203ENST00000612672 ABCA12Q86UK0 2595 aa23.05■■□□□ 1.28
MMP28-203ENST00000612672 A1L4Q6 167 aa23.04■■□□□ 1.28
MMP28-203ENST00000612672 TOX3O15405 576 aaPredicted RBP23.04■■□□□ 1.28
MMP28-203ENST00000612672 MTX2O75431 263 aa23.04■■□□□ 1.28
MMP28-203ENST00000612672 SORBS2O94875 1100 aaKnown RBP23.04■■□□□ 1.28
MMP28-203ENST00000612672 VIPP01282 170 aa23.04■■□□□ 1.28
MMP28-203ENST00000612672 AMD1P17707 334 aa23.04■■□□□ 1.28
MMP28-203ENST00000612672 RPL10P27635 214 aaKnown RBP23.04■■□□□ 1.28
MMP28-203ENST00000612672 CASP14P31944 242 aa23.04■■□□□ 1.28
MMP28-203ENST00000612672 NOP2P46087 812 aaKnown RBP23.04■■□□□ 1.28
MMP28-203ENST00000612672 ZNF165P49910 485 aa23.04■■□□□ 1.28
MMP28-203ENST00000612672 DPYSL3Q14195 570 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms