RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 BTN2A2Q8WVV5 523 aa17.38■□□□□ 0.37
SREK1-216ENST00000612404 ISL2Q96A47 359 aa17.38■□□□□ 0.37
SREK1-216ENST00000612404 ALKBH8Q96BT7 664 aaKnown RBP17.38■□□□□ 0.37
SREK1-216ENST00000612404 TSPAN17Q96FV3 270 aa17.38■□□□□ 0.37
SREK1-216ENST00000612404 DCUN1D1Q96GG9 259 aa17.38■□□□□ 0.37
SREK1-216ENST00000612404 VPS35Q96QK1 796 aa17.38■□□□□ 0.37
SREK1-216ENST00000612404 UHRF1Q96T88 793 aaPredicted RBP17.38■□□□□ 0.37
SREK1-216ENST00000612404 P2RY12Q9H244 342 aa17.38■□□□□ 0.37
SREK1-216ENST00000612404 A0A096LPK6 155 aa17.37■□□□□ 0.37
SREK1-216ENST00000612404 TMEM120BA0PK00 339 aa17.37■□□□□ 0.37
SREK1-216ENST00000612404 COPEO14579 308 aa17.37■□□□□ 0.37
SREK1-216ENST00000612404 RHOBTB1O94844 696 aa17.37■□□□□ 0.37
SREK1-216ENST00000612404 SOD1P00441 154 aa17.37■□□□□ 0.37
SREK1-216ENST00000612404 MPOP05164 745 aa17.37■□□□□ 0.37
SREK1-216ENST00000612404 GMPRP36959 345 aa17.37■□□□□ 0.37
SREK1-216ENST00000612404 NSG1P42857 185 aa17.37■□□□□ 0.37
SREK1-216ENST00000612404 ADARP55265 1226 aaKnown RBP17.37■□□□□ 0.37
SREK1-216ENST00000612404 SLC18A2Q05940 514 aa17.37■□□□□ 0.37
SREK1-216ENST00000612404 FGL2Q14314 439 aa17.37■□□□□ 0.37
SREK1-216ENST00000612404 ITIH4Q14624 930 aa17.37■□□□□ 0.37
SREK1-216ENST00000612404 WSCD2Q2TBF2 565 aa17.37■□□□□ 0.37
SREK1-216ENST00000612404 CTSL3PQ5NE16 218 aa17.37■□□□□ 0.37
SREK1-216ENST00000612404 PIM3Q86V86 326 aa17.37■□□□□ 0.37
SREK1-216ENST00000612404 PHYKPLQ8IUZ5 450 aa17.37■□□□□ 0.37
SREK1-216ENST00000612404 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.37■□□□□ 0.37
SREK1-216ENST00000612404 BANPQ8N9N5 519 aa17.37■□□□□ 0.37
SREK1-216ENST00000612404 C1QTNF2Q9BXJ5 285 aa17.37■□□□□ 0.37
SREK1-216ENST00000612404 GNPTGQ9UJJ9 305 aa17.37■□□□□ 0.37
SREK1-216ENST00000612404 PCDHB1Q9Y5F3 818 aa17.37■□□□□ 0.37
SREK1-216ENST00000612404 E5RI56 91 aa17.36■□□□□ 0.37
SREK1-216ENST00000612404 DCXO43602 365 aa17.36■□□□□ 0.37
SREK1-216ENST00000612404 SEMA4FO95754 770 aa17.36■□□□□ 0.37
SREK1-216ENST00000612404 C2P06681 752 aa17.36■□□□□ 0.37
SREK1-216ENST00000612404 MSH3P20585 1137 aa17.36■□□□□ 0.37
SREK1-216ENST00000612404 CRABP2P29373 138 aa17.36■□□□□ 0.37
SREK1-216ENST00000612404 CCNFP41002 786 aa17.36■□□□□ 0.37
SREK1-216ENST00000612404 MAGEA12P43365 314 aa17.36■□□□□ 0.37
SREK1-216ENST00000612404 GYS2P54840 703 aa17.36■□□□□ 0.37
SREK1-216ENST00000612404 B4GALNT1Q00973 533 aa17.36■□□□□ 0.37
SREK1-216ENST00000612404 TAF1BQ53T94 588 aaPredicted RBP17.36■□□□□ 0.37
SREK1-216ENST00000612404 LDLRAP1Q5SW96 308 aa17.36■□□□□ 0.37
SREK1-216ENST00000612404 ZNF648Q5T619 568 aaPredicted RBP17.36■□□□□ 0.37
SREK1-216ENST00000612404 PNCKQ6P2M8 343 aa17.36■□□□□ 0.37
SREK1-216ENST00000612404 DET1Q7L5Y6 550 aa17.36■□□□□ 0.37
SREK1-216ENST00000612404 NLRP8Q86W28 1048 aa17.36■□□□□ 0.37
SREK1-216ENST00000612404 ANKRD42Q8N9B4 389 aa17.36■□□□□ 0.37
SREK1-216ENST00000612404 TOE1Q96GM8 510 aaKnown RBP17.36■□□□□ 0.37
SREK1-216ENST00000612404 APOPT1Q96IL0 206 aa17.36■□□□□ 0.37
SREK1-216ENST00000612404 C1QTNF7Q9BXJ2 289 aa17.36■□□□□ 0.37
SREK1-216ENST00000612404 IQCGQ9H095 443 aaKnown RBP17.36■□□□□ 0.37
SREK1-216ENST00000612404 SMG5Q9UPR3 1016 aaKnown RBP17.36■□□□□ 0.37
SREK1-216ENST00000612404 PRSS21Q9Y6M0 314 aa17.36■□□□□ 0.37
SREK1-216ENST00000612404 CFAP99D6REC4 459 aa17.36■□□□□ 0.37
SREK1-216ENST00000612404 SLC31A1O15431 190 aa17.36■□□□□ 0.37
SREK1-216ENST00000612404 PI15O43692 258 aa17.36■□□□□ 0.37
SREK1-216ENST00000612404 NIPSNAP2O75323 286 aa17.36■□□□□ 0.37
SREK1-216ENST00000612404 TOP3BO95985 862 aaKnown RBP17.36■□□□□ 0.37
SREK1-216ENST00000612404 RALBP11234 206 aa17.36■□□□□ 0.37
SREK1-216ENST00000612404 CHRM3P20309 590 aa17.36■□□□□ 0.37
SREK1-216ENST00000612404 RPS3P23396 243 aaKnown RBP eCLIP17.36■□□□□ 0.37
SREK1-216ENST00000612404 CXCL12P48061 93 aa17.36■□□□□ 0.37
SREK1-216ENST00000612404 AGERQ15109 404 aa17.36■□□□□ 0.37
SREK1-216ENST00000612404 IRF4Q15306 451 aa17.36■□□□□ 0.37
SREK1-216ENST00000612404 ZKSCAN8Q15776 578 aaPredicted RBP17.36■□□□□ 0.37
SREK1-216ENST00000612404 MAP7D1Q3KQU3 841 aa17.36■□□□□ 0.37
SREK1-216ENST00000612404 TRIM74Q86UV6 250 aa17.36■□□□□ 0.37
SREK1-216ENST00000612404 DDHD1Q8NEL9 900 aa17.36■□□□□ 0.37
SREK1-216ENST00000612404 MDM1Q8TC05 714 aa17.36■□□□□ 0.37
SREK1-216ENST00000612404 RLN3Q8WXF3 142 aa17.36■□□□□ 0.37
SREK1-216ENST00000612404 CABS1Q96KC9 395 aa17.36■□□□□ 0.37
SREK1-216ENST00000612404 LENG8Q96PV6 779 aaPredicted RBP17.36■□□□□ 0.37
SREK1-216ENST00000612404 MBNL1Q9NR56 388 aaKnown RBP17.36■□□□□ 0.37
SREK1-216ENST00000612404 TAS2R13Q9NYV9 303 aa17.36■□□□□ 0.37
SREK1-216ENST00000612404 COMMD10Q9Y6G5 202 aa17.36■□□□□ 0.37
SREK1-216ENST00000612404 TTC28Q96AY4 2481 aa17.35■□□□□ 0.37
SREK1-216ENST00000612404 IGLV3-16A0A075B6K0 115 aa17.35■□□□□ 0.37
SREK1-216ENST00000612404 IQCF5A8MTL0 148 aa17.35■□□□□ 0.37
SREK1-216ENST00000612404 TYROBPO43914 113 aa17.35■□□□□ 0.37
SREK1-216ENST00000612404 DNAJC6O75061 913 aa17.35■□□□□ 0.37
SREK1-216ENST00000612404 ZNF217O75362 1048 aa17.35■□□□□ 0.37
SREK1-216ENST00000612404 IGLV3-19P01714 112 aa17.35■□□□□ 0.37
SREK1-216ENST00000612404 SLC35E2BP0CK96 405 aa17.35■□□□□ 0.37
SREK1-216ENST00000612404 FDXRP22570 491 aa17.35■□□□□ 0.37
SREK1-216ENST00000612404 OXTRP30559 389 aa17.35■□□□□ 0.37
SREK1-216ENST00000612404 RPA3P35244 121 aaPredicted RBP17.35■□□□□ 0.37
SREK1-216ENST00000612404 CCT5P48643 541 aa17.35■□□□□ 0.37
SREK1-216ENST00000612404 IRF9Q00978 393 aa17.35■□□□□ 0.37
SREK1-216ENST00000612404 PDAP1Q13442 181 aaKnown RBP17.35■□□□□ 0.37
SREK1-216ENST00000612404 KHDC1Q4VXA5 237 aaKnown RBP17.35■□□□□ 0.37
SREK1-216ENST00000612404 CWF19L1Q69YN2 538 aaKnown RBP17.35■□□□□ 0.37
SREK1-216ENST00000612404 SPNS2Q8IVW8 549 aa17.35■□□□□ 0.37
SREK1-216ENST00000612404 ARFGAP2Q8N6H7 521 aa17.35■□□□□ 0.37
SREK1-216ENST00000612404 MGARPQ8TDB4 240 aa17.35■□□□□ 0.37
SREK1-216ENST00000612404 MYOCQ99972 504 aa17.35■□□□□ 0.37
SREK1-216ENST00000612404 GPAMQ9HCL2 828 aa17.35■□□□□ 0.37
SREK1-216ENST00000612404 SSU72Q9NP77 194 aaKnown RBP17.35■□□□□ 0.37
SREK1-216ENST00000612404 SARS2Q9NP81 518 aaKnown RBP17.35■□□□□ 0.37
SREK1-216ENST00000612404 FZD3Q9NPG1 666 aa17.35■□□□□ 0.37
SREK1-216ENST00000612404 CNOT6Q9ULM6 557 aaKnown RBP17.35■□□□□ 0.37
SREK1-216ENST00000612404 ACOT9Q9Y305 439 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms