RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 CCL26Q9Y258 94 aa13.5□□□□□ -0.25
NEK3-205ENST00000610828 BTRCQ9Y297 605 aa13.5□□□□□ -0.25
NEK3-205ENST00000610828 KIAA0100Q14667 2235 aaKnown RBP13.5□□□□□ -0.25
NEK3-205ENST00000610828 PTPRSQ13332 1948 aa13.5□□□□□ -0.25
NEK3-205ENST00000610828 DOCK6Q96HP0 2047 aa13.5□□□□□ -0.25
NEK3-205ENST00000610828 HTRA2O43464 458 aaPredicted RBP13.5□□□□□ -0.25
NEK3-205ENST00000610828 SNRPB2P08579 225 aaKnown RBP13.5□□□□□ -0.25
NEK3-205ENST00000610828 RPS17P08708 135 aaKnown RBP13.5□□□□□ -0.25
NEK3-205ENST00000610828 LINC00032P0C843 101 aa13.5□□□□□ -0.25
NEK3-205ENST00000610828 TCN1P20061 433 aaPredicted RBP13.5□□□□□ -0.25
NEK3-205ENST00000610828 GJA8P48165 433 aa13.5□□□□□ -0.25
NEK3-205ENST00000610828 CLCN7P51798 805 aa13.5□□□□□ -0.25
NEK3-205ENST00000610828 RPL26P61254 145 aaKnown RBP13.5□□□□□ -0.25
NEK3-205ENST00000610828 LRRC36Q1X8D7 754 aa13.5□□□□□ -0.25
NEK3-205ENST00000610828 REP15Q6BDI9 236 aa13.5□□□□□ -0.25
NEK3-205ENST00000610828 PTRHD1Q6GMV3 140 aaKnown RBP13.5□□□□□ -0.25
NEK3-205ENST00000610828 PAOXQ6QHF9 649 aa13.5□□□□□ -0.25
NEK3-205ENST00000610828 CERS6Q6ZMG9 384 aa13.5□□□□□ -0.25
NEK3-205ENST00000610828 ADGRG6Q86SQ4 1221 aa13.5□□□□□ -0.25
NEK3-205ENST00000610828 SERPINA9Q86WD7 417 aa13.5□□□□□ -0.25
NEK3-205ENST00000610828 TCF25Q9BQ70 676 aa13.5□□□□□ -0.25
NEK3-205ENST00000610828 CLPBQ9H078 707 aa13.5□□□□□ -0.25
NEK3-205ENST00000610828 TUBB1Q9H4B7 451 aa13.5□□□□□ -0.25
NEK3-205ENST00000610828 CACNA2D2Q9NY47 1150 aa13.5□□□□□ -0.25
NEK3-205ENST00000610828 ADA2Q9NZK5 511 aa13.5□□□□□ -0.25
NEK3-205ENST00000610828 LRCH1Q9Y2L9 728 aa13.5□□□□□ -0.25
NEK3-205ENST00000610828 STX16O14662 325 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 KIAA0355O15063 1070 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 SOCS5O75159 536 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 LINC00271P0C7V0 271 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 ZNF7P17097 686 aaPredicted RBP13.49□□□□□ -0.25
NEK3-205ENST00000610828 ME2P23368 584 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 SERPINA4P29622 427 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 PRDX3P30048 256 aaKnown RBP13.49□□□□□ -0.25
NEK3-205ENST00000610828 CCR2P41597 374 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 HK3P52790 923 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 ATXN3P54252 364 aaPredicted RBP13.49□□□□□ -0.25
NEK3-205ENST00000610828 NME5P56597 212 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 ECT2LQ008S8 904 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 NFATC2Q13469 925 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 TXNDC11Q6PKC3 985 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 METTL3Q86U44 580 aaKnown RBP13.49□□□□□ -0.25
NEK3-205ENST00000610828 OR2AP1Q8NGE2 309 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 TUBGCP3Q96CW5 907 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 SLC25A23Q9BV35 468 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 BOCQ9BWV1 1114 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 CIPCQ9C0C6 399 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 ADAMTS6Q9UKP5 1117 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 TIMM22Q9Y584 194 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 PCDHB1Q9Y5F3 818 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 PDE4DIPQ5VU43 2346 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 GOLGA8CPA6NN73 597 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 FBP2O00757 339 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 GAPDHSO14556 408 aaPredicted RBP13.49□□□□□ -0.25
NEK3-205ENST00000610828 KLK8O60259 260 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 GLUD1P00367 558 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 SRCP12931 536 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 ITGB6P18564 788 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 ITGALP20701 1170 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 HLA-FP30511 346 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 CA5AP35218 305 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 CSNK1DP48730 415 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 PSME3P61289 254 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 SEMG2Q02383 582 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 TGFBIQ15582 683 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 RBBP7Q16576 425 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 PITRM1Q5JRX3 1037 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 ANO7Q6IWH7 933 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 SNX20Q7Z614 316 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 ZSWIM9Q86XI8 627 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 CLDN19Q8N6F1 224 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 FAM156AQ8NDB6 213 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 HGH1Q9BTY7 390 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 IL26Q9NPH9 171 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 BATF3Q9NR55 127 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 APPL1Q9UKG1 709 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 PCTPQ9UKL6 214 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 DHRS7Q9Y394 339 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 PCDHGA7Q9Y5G6 932 aa13.49□□□□□ -0.25
NEK3-205ENST00000610828 GIPC1O14908 333 aa13.48□□□□□ -0.25
NEK3-205ENST00000610828 UGT1A6P19224 532 aa13.48□□□□□ -0.25
NEK3-205ENST00000610828 UGT1A1P22309 533 aa13.48□□□□□ -0.25
NEK3-205ENST00000610828 UGT1A4P22310 534 aa13.48□□□□□ -0.25
NEK3-205ENST00000610828 UGT1A3P35503 534 aa13.48□□□□□ -0.25
NEK3-205ENST00000610828 UGT1A5P35504 534 aa13.48□□□□□ -0.25
NEK3-205ENST00000610828 ERVFC1P60507 584 aa13.48□□□□□ -0.25
NEK3-205ENST00000610828 SNRPD1P62314 119 aaKnown RBP13.48□□□□□ -0.25
NEK3-205ENST00000610828 MS4A2Q01362 244 aa13.48□□□□□ -0.25
NEK3-205ENST00000610828 LRP8Q14114 963 aa13.48□□□□□ -0.25
NEK3-205ENST00000610828 GRB7Q14451 532 aa13.48□□□□□ -0.25
NEK3-205ENST00000610828 FRA10AC1Q70Z53 315 aa13.48□□□□□ -0.25
NEK3-205ENST00000610828 TSPAN33Q86UF1 283 aa13.48□□□□□ -0.25
NEK3-205ENST00000610828 C1QTNF3Q9BXJ4 246 aa13.48□□□□□ -0.25
NEK3-205ENST00000610828 POLG2Q9UHN1 485 aa13.48□□□□□ -0.25
NEK3-205ENST00000610828 EIF2B4Q9UI10 523 aaKnown RBP13.48□□□□□ -0.25
NEK3-205ENST00000610828 MYOFQ9NZM1 2061 aa13.48□□□□□ -0.25
NEK3-205ENST00000610828 GLYATL1P3A0A0U1RQE8 302 aa13.47□□□□□ -0.25
NEK3-205ENST00000610828 CAPN8A6NHC0 703 aa13.47□□□□□ -0.25
NEK3-205ENST00000610828 HIDE1A8MVS5 230 aa13.47□□□□□ -0.25
NEK3-205ENST00000610828 H3BNX3 289 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms